Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10625

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
2,252,407	+				-0.2
2,252,407	+				+0.5
2,252,408	-				+0.2
2,252,408	-				-0.8
2,252,408	-				+0.2
2,252,408	-				+0.5
2,252,420	+		DZA65_RS10615	0.11	-0.4
2,252,435	+		DZA65_RS10615	0.14	+0.6
2,252,543	+		DZA65_RS10615	0.35	-2.4
2,252,732	+		DZA65_RS10615	0.72	-1.4
2,252,732	+		DZA65_RS10615	0.72	-1.0
2,252,732	+				+2.5
2,252,732	+		DZA65_RS10615	0.72	-0.6
2,252,732	+		DZA65_RS10615	0.72	-0.9
2,252,733	-		DZA65_RS10615	0.72	+0.4
2,252,733	-		DZA65_RS10615	0.72	-0.4
2,252,733	-		DZA65_RS10615	0.72	-1.1
2,252,733	-		DZA65_RS10615	0.72	-2.6
2,252,733	-		DZA65_RS10615	0.72	+0.2
2,252,733	-		DZA65_RS10615	0.72	+0.4
2,252,736	+		DZA65_RS10615	0.73	+2.5
2,252,736	+		DZA65_RS10615	0.73	-0.9
2,252,736	+		DZA65_RS10615	0.73	-0.2
2,252,737	-		DZA65_RS10615	0.73	-0.3
2,252,737	-		DZA65_RS10615	0.73	+0.8
2,252,737	-		DZA65_RS10615	0.73	+0.1
2,252,737	-		DZA65_RS10615	0.73	+0.6
2,252,773	+		DZA65_RS10615	0.80	-0.5
2,252,824	+		DZA65_RS10615	0.90	-1.5
2,252,913	+				-0.2
2,252,914	-				-0.2
2,252,920	-				+0.7
2,252,920	-				+0.2
2,252,945	+				-1.8
2,252,945	+				-0.0
2,252,949	+				-1.2
2,252,950	-				-1.6
2,252,950	-				-1.8
2,252,950	-				+1.1
2,252,950	-				+0.2
2,252,970	+				+0.8
2,252,975	+				-0.4
2,252,976	-				+0.8
2,252,977	+				+0.4
2,253,005	-				+0.2
2,253,005	-				-2.1
2,253,009	-				+0.2
2,253,018	-				-0.4
2,253,073	+				+0.4
2,253,120	+				+0.2
2,253,131	+				+0.9
2,253,131	+				+1.2
2,253,131	+				+2.3
2,253,131	+				-0.6
2,253,131	+				-0.0
2,253,208	+				-1.4
2,253,217	+				+0.2
2,253,360	-				-1.5
2,253,424	-		DZA65_RS10625	0.14	+0.2
2,253,448	+		DZA65_RS10625	0.18	+0.1
2,253,449	-		DZA65_RS10625	0.18	+0.4
2,253,493	-		DZA65_RS10625	0.25	-1.4
2,253,493	-		DZA65_RS10625	0.25	+0.4
2,253,496	+		DZA65_RS10625	0.25	+0.5
2,253,496	+		DZA65_RS10625	0.25	-2.1
2,253,497	-		DZA65_RS10625	0.25	+0.8
2,253,497	-		DZA65_RS10625	0.25	+0.8
2,253,497	-		DZA65_RS10625	0.25	-2.4
2,253,565	-		DZA65_RS10625	0.35	+1.1
2,253,589	-		DZA65_RS10625	0.39	+0.6
2,253,589	-		DZA65_RS10625	0.39	-1.1
2,253,602	+		DZA65_RS10625	0.40	+0.2
2,253,634	+		DZA65_RS10625	0.45	-1.5
2,253,634	+		DZA65_RS10625	0.45	-1.3
2,253,640	+		DZA65_RS10625	0.46	-0.8
2,253,641	-		DZA65_RS10625	0.46	+0.3
2,253,650	-		DZA65_RS10625	0.48	-0.7
2,253,727	-		DZA65_RS10625	0.59	-0.2
2,253,815	+		DZA65_RS10625	0.72	+1.0
2,253,815	+		DZA65_RS10625	0.72	-1.6
2,253,816	-		DZA65_RS10625	0.72	-0.3
2,253,846	+		DZA65_RS10625	0.76	-2.6
2,253,846	+		DZA65_RS10625	0.76	+0.0
2,253,847	-		DZA65_RS10625	0.76	+1.0
2,253,886	+		DZA65_RS10625	0.82	+0.6
2,253,887	-		DZA65_RS10625	0.82	+0.6
2,253,887	-		DZA65_RS10625	0.82	+1.0
2,253,887	-		DZA65_RS10625	0.82	+1.0
2,253,887	-		DZA65_RS10625	0.82	+0.5
2,253,887	-		DZA65_RS10625	0.82	+0.2
2,253,888	+		DZA65_RS10625	0.82	+2.0
2,253,888	+		DZA65_RS10625	0.82	-0.3
2,253,889	-		DZA65_RS10625	0.82	-0.8
2,253,985	+				+0.4
2,253,986	-				+0.7
2,253,986	-				-0.4
2,254,011	+				-1.6
2,254,011	+				-1.4
2,254,012	-				-0.4
2,254,012	-				+2.2
2,254,012	-				-1.4
2,254,083	+				+1.2
2,254,084	-				-0.1
2,254,297	+		DZA65_RS10630	0.22	-0.5
2,254,297	+		DZA65_RS10630	0.22	-0.4
2,254,297	+		DZA65_RS10630	0.22	+0.4
2,254,297	+		DZA65_RS10630	0.22	+0.6
2,254,297	+		DZA65_RS10630	0.22	+1.2
2,254,297	+		DZA65_RS10630	0.22	-0.8
2,254,297	+		DZA65_RS10630	0.22	+0.8
2,254,297	+		DZA65_RS10630	0.22	+0.2
2,254,297	+		DZA65_RS10630	0.22	+0.8
2,254,298	-				+1.8
2,254,298	-		DZA65_RS10630	0.22	+1.6
2,254,493	+		DZA65_RS10630	0.39	-0.4
2,254,642	+		DZA65_RS10630	0.52	-0.2
2,254,642	+		DZA65_RS10630	0.52	+0.5
2,254,642	+		DZA65_RS10630	0.52	+1.6
2,254,642	+		DZA65_RS10630	0.52	-0.8
2,254,642	+		DZA65_RS10630	0.52	-1.1
2,254,642	+		DZA65_RS10630	0.52	+0.5
2,254,642	+		DZA65_RS10630	0.52	+0.3
2,254,642	+		DZA65_RS10630	0.52	+1.0
2,254,642	+		DZA65_RS10630	0.52	+0.2
2,254,642	+				+2.2
2,254,642	+		DZA65_RS10630	0.52	+0.5
2,254,642	+		DZA65_RS10630	0.52	+0.2
2,254,642	+		DZA65_RS10630	0.52	-0.8
2,254,642	+		DZA65_RS10630	0.52	+0.7
2,254,643	-		DZA65_RS10630	0.52	+0.4
2,254,643	-		DZA65_RS10630	0.52	-0.0
2,254,643	-		DZA65_RS10630	0.52	-0.1
2,254,643	-		DZA65_RS10630	0.52	-0.4
2,254,643	-		DZA65_RS10630	0.52	+1.0
2,254,643	-		DZA65_RS10630	0.52	+0.0
2,254,643	-		DZA65_RS10630	0.52	+0.2
2,254,643	-		DZA65_RS10630	0.52	+1.1
2,254,643	-		DZA65_RS10630	0.52	-0.4
2,254,643	-		DZA65_RS10630	0.52	-0.8
2,254,644	+		DZA65_RS10630	0.52	+0.8
2,254,736	+		DZA65_RS10630	0.60	+0.0
2,254,736	+		DZA65_RS10630	0.60	+0.7
2,254,880	-		DZA65_RS10630	0.73	-0.1
2,254,949	+		DZA65_RS10630	0.79	+1.2
2,254,949	+		DZA65_RS10630	0.79	-0.1
2,254,949	+		DZA65_RS10630	0.79	-2.4
2,254,950	-		DZA65_RS10630	0.79	+0.4
2,254,953	+		DZA65_RS10630	0.79	-0.5
2,254,953	+		DZA65_RS10630	0.79	+0.5
2,254,953	+		DZA65_RS10630	0.79	-2.1
2,254,953	+		DZA65_RS10630	0.79	+0.9
2,254,953	+		DZA65_RS10630	0.79	+0.4
2,254,953	+		DZA65_RS10630	0.79	+1.2
2,254,953	+		DZA65_RS10630	0.79	-0.2
2,254,953	+		DZA65_RS10630	0.79	+1.2
2,254,953	+		DZA65_RS10630	0.79	-0.1
2,254,953	+		DZA65_RS10630	0.79	+0.2
2,254,953	+		DZA65_RS10630	0.79	+0.9
2,254,953	+		DZA65_RS10630	0.79	-0.5
2,254,953	+		DZA65_RS10630	0.79	-0.2
2,254,954	-		DZA65_RS10630	0.79	+0.6
2,254,954	-		DZA65_RS10630	0.79	-1.4
2,254,954	-		DZA65_RS10630	0.79	+0.6
2,254,954	-		DZA65_RS10630	0.79	+0.7
2,254,954	-		DZA65_RS10630	0.79	-1.4
2,254,954	-		DZA65_RS10630	0.79	-0.8
2,254,954	-		DZA65_RS10630	0.79	-1.2
2,254,954	-				+0.2