Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09080

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
1,912,573	-		DZA65_RS09075	0.28	+0.4
1,912,573	-		DZA65_RS09075	0.28	-0.2
1,912,652	+		DZA65_RS09075	0.34	-1.6
1,912,653	-		DZA65_RS09075	0.34	+1.4
1,912,671	+		DZA65_RS09075	0.35	-0.6
1,912,671	+		DZA65_RS09075	0.35	-0.9
1,912,672	-		DZA65_RS09075	0.35	-1.6
1,912,672	-		DZA65_RS09075	0.35	-0.3
1,912,672	-		DZA65_RS09075	0.35	-0.4
1,912,833	+		DZA65_RS09075	0.47	-0.2
1,912,833	+		DZA65_RS09075	0.47	+0.2
1,912,833	+		DZA65_RS09075	0.47	-0.7
1,912,833	+		DZA65_RS09075	0.47	-0.4
1,912,834	-		DZA65_RS09075	0.47	-0.4
1,912,834	-		DZA65_RS09075	0.47	-3.5
1,912,834	-		DZA65_RS09075	0.47	+0.2
1,912,834	-		DZA65_RS09075	0.47	-0.1
1,912,867	+		DZA65_RS09075	0.50	-0.6
1,912,867	+		DZA65_RS09075	0.50	+0.0
1,912,867	+				+0.4
1,912,867	+		DZA65_RS09075	0.50	+0.8
1,912,867	+		DZA65_RS09075	0.50	-1.9
1,912,867	+		DZA65_RS09075	0.50	-0.3
1,912,867	+		DZA65_RS09075	0.50	-0.1
1,912,867	+		DZA65_RS09075	0.50	+0.9
1,912,868	-		DZA65_RS09075	0.50	+0.9
1,912,868	-		DZA65_RS09075	0.50	-0.2
1,912,868	-		DZA65_RS09075	0.50	+0.8
1,912,868	-		DZA65_RS09075	0.50	-0.2
1,912,915	-		DZA65_RS09075	0.53	-1.5
1,913,043	+		DZA65_RS09075	0.63	-1.2
1,913,149	+		DZA65_RS09075	0.70	+0.1
1,913,149	+		DZA65_RS09075	0.70	+0.7
1,913,149	+		DZA65_RS09075	0.70	-0.3
1,913,149	+		DZA65_RS09075	0.70	+0.7
1,913,149	+		DZA65_RS09075	0.70	-1.3
1,913,149	+		DZA65_RS09075	0.70	-0.6
1,913,149	+		DZA65_RS09075	0.70	-0.2
1,913,149	+		DZA65_RS09075	0.70	+0.8
1,913,150	-		DZA65_RS09075	0.70	+0.4
1,913,150	-		DZA65_RS09075	0.70	-0.4
1,913,150	-		DZA65_RS09075	0.70	-2.0
1,913,150	-		DZA65_RS09075	0.70	-1.1
1,913,150	-		DZA65_RS09075	0.70	-0.3
1,913,150	-		DZA65_RS09075	0.70	+1.7
1,913,150	-		DZA65_RS09075	0.70	+1.2
1,913,150	-		DZA65_RS09075	0.70	-1.5
1,913,150	-		DZA65_RS09075	0.70	-0.1
1,913,176	+		DZA65_RS09075	0.72	-2.1
1,913,176	+		DZA65_RS09075	0.72	-0.5
1,913,176	+		DZA65_RS09075	0.72	+1.9
1,913,176	+		DZA65_RS09075	0.72	-1.1
1,913,177	-		DZA65_RS09075	0.72	-1.7
1,913,177	-		DZA65_RS09075	0.72	-1.0
1,913,177	-		DZA65_RS09075	0.72	+0.1
1,913,177	-		DZA65_RS09075	0.72	-0.4
1,913,177	-		DZA65_RS09075	0.72	-1.0
1,913,177	-		DZA65_RS09075	0.72	+0.5
1,913,177	-		DZA65_RS09075	0.72	-0.7
1,913,177	-		DZA65_RS09075	0.72	-1.1
1,913,214	+		DZA65_RS09075	0.75	-0.9
1,913,556	+				+1.6
1,913,556	+				+1.6
1,913,557	-				+1.1
1,913,557	-				-0.1
1,913,557	-				+1.4
1,913,557	-				-0.6
1,913,558	+				+1.8
1,913,662	-		DZA65_RS09080	0.12	+1.4
1,913,671	-		DZA65_RS09080	0.13	-0.6
1,913,683	+		DZA65_RS09080	0.14	-2.5
1,913,683	+		DZA65_RS09080	0.14	-1.1
1,913,683	+		DZA65_RS09080	0.14	-0.5
1,913,713	+		DZA65_RS09080	0.18	+0.1
1,913,713	+		DZA65_RS09080	0.18	-0.2
1,913,713	+		DZA65_RS09080	0.18	-0.5
1,913,713	+		DZA65_RS09080	0.18	-2.2
1,913,713	+		DZA65_RS09080	0.18	+0.2
1,913,714	-		DZA65_RS09080	0.18	-0.2
1,913,714	-		DZA65_RS09080	0.18	-1.5
1,913,714	-		DZA65_RS09080	0.18	-0.1
1,913,714	-		DZA65_RS09080	0.18	+0.4
1,913,714	-		DZA65_RS09080	0.18	+0.3
1,913,714	-		DZA65_RS09080	0.18	-0.9
1,913,714	-		DZA65_RS09080	0.18	+0.2
1,913,714	-		DZA65_RS09080	0.18	+0.3
1,913,714	-		DZA65_RS09080	0.18	-0.4
1,913,714	-		DZA65_RS09080	0.18	-1.1
1,913,714	-		DZA65_RS09080	0.18	+2.2
1,913,718	+		DZA65_RS09080	0.18	+0.8
1,913,718	+		DZA65_RS09080	0.18	-1.6
1,913,718	+		DZA65_RS09080	0.18	-1.6
1,913,719	-		DZA65_RS09080	0.18	+0.1
1,913,760	+		DZA65_RS09080	0.23	-1.8
1,913,760	+		DZA65_RS09080	0.23	+0.0
1,913,761	-		DZA65_RS09080	0.23	-0.1
1,913,761	-		DZA65_RS09080	0.23	+0.9
1,913,761	-		DZA65_RS09080	0.23	+0.4
1,913,799	+		DZA65_RS09080	0.27	+0.1
1,913,799	+		DZA65_RS09080	0.27	+0.2
1,913,799	+		DZA65_RS09080	0.27	-0.2
1,913,799	+		DZA65_RS09080	0.27	-2.2
1,913,799	+		DZA65_RS09080	0.27	+0.8
1,913,799	+		DZA65_RS09080	0.27	+0.4
1,913,799	+		DZA65_RS09080	0.27	-0.6
1,913,799	+		DZA65_RS09080	0.27	-1.6
1,913,799	+		DZA65_RS09080	0.27	+1.0
1,913,800	-		DZA65_RS09080	0.27	+0.4
1,913,800	-		DZA65_RS09080	0.27	-0.1
1,913,800	-		DZA65_RS09080	0.27	-1.2
1,913,800	-		DZA65_RS09080	0.27	+0.4
1,913,800	-		DZA65_RS09080	0.27	+0.4
1,913,800	-		DZA65_RS09080	0.27	-0.6
1,913,800	-		DZA65_RS09080	0.27	+0.9
1,913,800	-		DZA65_RS09080	0.27	+1.0
1,913,817	+		DZA65_RS09080	0.29	-0.6
1,913,889	+		DZA65_RS09080	0.37	+0.6
1,913,889	+		DZA65_RS09080	0.37	+0.4
1,913,889	+		DZA65_RS09080	0.37	+0.2
1,913,889	+		DZA65_RS09080	0.37	+2.4
1,913,889	+		DZA65_RS09080	0.37	-0.1
1,913,889	+		DZA65_RS09080	0.37	-1.8
1,913,889	+		DZA65_RS09080	0.37	+2.9
1,913,889	+		DZA65_RS09080	0.37	-0.5
1,913,889	+		DZA65_RS09080	0.37	-0.9
1,913,889	+		DZA65_RS09080	0.37	-0.1
1,913,890	-		DZA65_RS09080	0.37	-1.6
1,913,890	-		DZA65_RS09080	0.37	+1.0
1,913,890	-		DZA65_RS09080	0.37	-1.6
1,913,890	-		DZA65_RS09080	0.37	-0.8
1,913,890	-		DZA65_RS09080	0.37	+0.4
1,913,890	-		DZA65_RS09080	0.37	+1.4
1,913,890	-		DZA65_RS09080	0.37	-0.6
1,913,892	-		DZA65_RS09080	0.38	+1.1
1,913,892	-		DZA65_RS09080	0.38	-0.6
1,913,896	+		DZA65_RS09080	0.38	+0.2
1,913,896	+		DZA65_RS09080	0.38	+1.0
1,913,897	-		DZA65_RS09080	0.38	+0.6
1,913,897	-		DZA65_RS09080	0.38	+1.2
1,913,897	-		DZA65_RS09080	0.38	+0.7
1,913,897	-		DZA65_RS09080	0.38	+0.0
1,913,897	-		DZA65_RS09080	0.38	+0.4
1,913,976	+		DZA65_RS09080	0.47	-0.4
1,913,977	-		DZA65_RS09080	0.47	-0.5
1,914,210	+		DZA65_RS09080	0.73	-0.0
1,914,210	+		DZA65_RS09080	0.73	+1.4
1,914,210	+		DZA65_RS09080	0.73	+0.5
1,914,210	+		DZA65_RS09080	0.73	-0.5
1,914,210	+		DZA65_RS09080	0.73	+0.4
1,914,210	+		DZA65_RS09080	0.73	+0.7
1,914,211	-				+1.9
1,914,211	-		DZA65_RS09080	0.73	+0.7
1,914,211	-		DZA65_RS09080	0.73	+0.0
1,914,226	+		DZA65_RS09080	0.75	-0.3
1,914,226	+		DZA65_RS09080	0.75	+0.1
1,914,256	+		DZA65_RS09080	0.78	-1.1
1,914,256	+		DZA65_RS09080	0.78	+0.7
1,914,256	+		DZA65_RS09080	0.78	+1.4
1,914,256	+		DZA65_RS09080	0.78	-0.1
1,914,257	-		DZA65_RS09080	0.78	+1.4
1,914,257	-		DZA65_RS09080	0.78	+0.2
1,914,257	-		DZA65_RS09080	0.78	+0.5
1,914,386	+				+0.2
1,914,386	+				+0.7
1,914,435	+				-0.4
1,914,436	-				-0.1
1,914,436	-				-0.8
1,914,436	-				+0.9
1,914,445	+				+0.4
1,914,515	+				-0.2
1,914,515	+				-0.2
1,914,515	+				-0.7
1,914,516	-				-0.9
1,914,516	-				+0.3
1,914,516	-				+1.5
1,914,552	-				+0.4
1,914,552	-				-0.6
1,914,632	+				+0.1
1,914,633	-				+1.9
1,914,633	-				+0.1
1,914,634	+				-2.0
1,914,635	-				-1.5
1,914,635	-				-0.1
1,914,635	-				+0.6
1,914,635	-				+0.1
1,914,656	+				-0.6
1,914,657	-				-0.2
1,914,716	-		DZA65_RS09085	0.11	-0.6
1,914,716	-		DZA65_RS09085	0.11	+0.5
1,914,743	+		DZA65_RS09085	0.14	+1.4
1,914,743	+		DZA65_RS09085	0.14	-0.2
1,914,786	+		DZA65_RS09085	0.19	+0.8
1,914,786	+		DZA65_RS09085	0.19	+1.4
1,914,786	+		DZA65_RS09085	0.19	-0.2
1,914,786	+		DZA65_RS09085	0.19	+0.1
1,914,786	+		DZA65_RS09085	0.19	+0.6
1,914,786	+		DZA65_RS09085	0.19	+1.8
1,914,787	-		DZA65_RS09085	0.20	-1.1
1,914,787	-		DZA65_RS09085	0.20	+0.0
1,914,787	-		DZA65_RS09085	0.20	-0.6
1,914,787	-		DZA65_RS09085	0.20	+0.1
1,914,787	-		DZA65_RS09085	0.20	+0.9
1,914,787	-		DZA65_RS09085	0.20	-0.0
1,914,888	+		DZA65_RS09085	0.32	+0.4
1,914,888	+		DZA65_RS09085	0.32	+0.0
1,914,888	+		DZA65_RS09085	0.32	+0.5
1,914,889	-		DZA65_RS09085	0.32	-0.6
1,914,946	-		DZA65_RS09085	0.39	-1.3
1,914,946	-		DZA65_RS09085	0.39	-0.4
1,914,946	-		DZA65_RS09085	0.39	+0.1
1,914,946	-		DZA65_RS09085	0.39	-1.8
1,914,946	-		DZA65_RS09085	0.39	+0.6
1,914,946	-		DZA65_RS09085	0.39	+0.1
1,914,946	-		DZA65_RS09085	0.39	+1.7
1,914,946	-		DZA65_RS09085	0.39	+0.1
1,914,998	-		DZA65_RS09085	0.45	-0.1
1,914,998	-		DZA65_RS09085	0.45	-0.3
1,914,998	-		DZA65_RS09085	0.45	-1.2
1,915,113	+		DZA65_RS09085	0.60	-1.0
1,915,113	+		DZA65_RS09085	0.60	+1.0
1,915,113	+		DZA65_RS09085	0.60	+0.6
1,915,114	-		DZA65_RS09085	0.60	+0.4
1,915,114	-		DZA65_RS09085	0.60	+0.6
1,915,114	-		DZA65_RS09085	0.60	-0.5
1,915,114	-		DZA65_RS09085	0.60	-0.1
1,915,114	-		DZA65_RS09085	0.60	+0.9
1,915,114	-		DZA65_RS09085	0.60	-0.6
1,915,114	-		DZA65_RS09085	0.60	+1.1
1,915,114	-		DZA65_RS09085	0.60	+0.8
1,915,114	-		DZA65_RS09085	0.60	-0.5
1,915,114	-		DZA65_RS09085	0.60	-0.6
1,915,269	+		DZA65_RS09085	0.79	+1.1
1,915,282	-		DZA65_RS09085	0.80	+1.2
1,915,420	-				-0.6
1,915,441	-				+1.7
1,915,445	+				-2.2
1,915,445	+				+0.7
1,915,445	+				-0.8
1,915,445	+				+1.7
1,915,445	+				+0.1
1,915,445	+				+0.0
1,915,445	+				+0.6
1,915,445	+				+0.4
1,915,446	-				-1.6
1,915,446	-				+0.4
1,915,446	-				+0.5
1,915,446	-				-0.1
1,915,446	-				-0.6
1,915,446	-				+1.1