Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07110

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
1,475,854	+				-0.4
1,475,925	-		DZA65_RS07105	0.11	+0.2
1,476,007	+		DZA65_RS07105	0.20	-0.1
1,476,007	+		DZA65_RS07105	0.20	+0.3
1,476,033	+		DZA65_RS07105	0.23	-0.2
1,476,055	-		DZA65_RS07105	0.25	+0.4
1,476,055	-		DZA65_RS07105	0.25	-0.2
1,476,061	-		DZA65_RS07105	0.26	+1.8
1,476,064	+		DZA65_RS07105	0.26	-0.7
1,476,064	+		DZA65_RS07105	0.26	+1.4
1,476,064	+		DZA65_RS07105	0.26	+1.3
1,476,065	-		DZA65_RS07105	0.26	+0.1
1,476,065	-		DZA65_RS07105	0.26	+0.5
1,476,077	+		DZA65_RS07105	0.27	+0.5
1,476,077	+		DZA65_RS07105	0.27	-0.5
1,476,163	+		DZA65_RS07105	0.37	+1.1
1,476,192	+		DZA65_RS07105	0.40	-0.5
1,476,193	-		DZA65_RS07105	0.40	-0.3
1,476,193	-		DZA65_RS07105	0.40	-0.9
1,476,198	+		DZA65_RS07105	0.41	-0.7
1,476,199	-		DZA65_RS07105	0.41	+0.9
1,476,217	+		DZA65_RS07105	0.43	+0.2
1,476,222	+		DZA65_RS07105	0.43	+0.2
1,476,223	-		DZA65_RS07105	0.43	+2.2
1,476,223	-		DZA65_RS07105	0.43	-0.5
1,476,252	+		DZA65_RS07105	0.47	-0.4
1,476,253	-		DZA65_RS07105	0.47	+0.4
1,476,254	+		DZA65_RS07105	0.47	-0.2
1,476,254	+		DZA65_RS07105	0.47	-0.5
1,476,254	+		DZA65_RS07105	0.47	+0.4
1,476,255	-		DZA65_RS07105	0.47	+0.8
1,476,277	-		DZA65_RS07105	0.49	+0.6
1,476,279	+		DZA65_RS07105	0.50	+0.4
1,476,291	+		DZA65_RS07105	0.51	+1.3
1,476,357	+		DZA65_RS07105	0.58	+0.4
1,476,357	+		DZA65_RS07105	0.58	-0.9
1,476,357	+		DZA65_RS07105	0.58	+0.1
1,476,357	+		DZA65_RS07105	0.58	+1.1
1,476,379	+		DZA65_RS07105	0.61	+1.5
1,476,379	+		DZA65_RS07105	0.61	+1.2
1,476,380	-		DZA65_RS07105	0.61	+0.0
1,476,380	-		DZA65_RS07105	0.61	-0.7
1,476,380	-		DZA65_RS07105	0.61	-0.1
1,476,380	-		DZA65_RS07105	0.61	-0.3
1,476,409	+		DZA65_RS07105	0.64	-2.1
1,476,411	+		DZA65_RS07105	0.64	+0.5
1,476,411	+		DZA65_RS07105	0.64	+0.4
1,476,411	+		DZA65_RS07105	0.64	+0.3
1,476,411	+		DZA65_RS07105	0.64	-1.2
1,476,412	-				-0.5
1,476,412	-		DZA65_RS07105	0.64	-1.1
1,476,422	-		DZA65_RS07105	0.65	-0.7
1,476,422	-		DZA65_RS07105	0.65	+1.0
1,476,422	-		DZA65_RS07105	0.65	+2.1
1,476,603	+		DZA65_RS07105	0.85	-2.2
1,476,603	+		DZA65_RS07105	0.85	+0.6
1,476,611	-				+1.2
1,476,634	-		DZA65_RS07105	0.88	+0.5
1,476,640	-		DZA65_RS07105	0.89	+0.2
1,476,675	+				+1.1
1,476,699	+				-1.3
1,476,699	+				-0.2
1,476,711	+				+0.2
1,476,736	+				-0.8
1,476,736	+				+0.1
1,476,736	+				+0.5
1,476,801	-				-0.2
1,476,837	+				-1.5
1,476,864	+				-1.7
1,476,888	+				-2.3
1,476,900	+				+1.0
1,476,900	+				-1.2
1,476,920	+				+0.3
1,476,921	-				+0.3
1,476,937	+				-1.5
1,476,937	+				-1.0
1,476,938	-				+0.4
1,477,132	-		DZA65_RS07110	0.28	+0.9
1,477,144	+		DZA65_RS07110	0.29	-1.5
1,477,144	+		DZA65_RS07110	0.29	-2.1
1,477,144	+		DZA65_RS07110	0.29	-0.5
1,477,144	+		DZA65_RS07110	0.29	-3.0
1,477,144	+		DZA65_RS07110	0.29	-3.3
1,477,145	-		DZA65_RS07110	0.29	-1.5
1,477,145	-				+2.1
1,477,240	+		DZA65_RS07110	0.38	-1.1
1,477,241	-		DZA65_RS07110	0.38	+1.2
1,477,360	+		DZA65_RS07110	0.50	-2.3
1,477,399	+		DZA65_RS07110	0.53	-3.3
1,477,399	+		DZA65_RS07110	0.53	-2.7
1,477,400	-		DZA65_RS07110	0.53	-0.2
1,477,400	-		DZA65_RS07110	0.53	-0.1
1,477,509	-		DZA65_RS07110	0.64	-1.6
1,477,510	+		DZA65_RS07110	0.64	-2.1
1,477,510	+		DZA65_RS07110	0.64	-1.2
1,477,510	+		DZA65_RS07110	0.64	-3.3
1,477,510	+		DZA65_RS07110	0.64	-2.1
1,477,510	+		DZA65_RS07110	0.64	-1.5
1,477,510	+		DZA65_RS07110	0.64	-0.9
1,477,510	+		DZA65_RS07110	0.64	-1.1
1,477,510	+		DZA65_RS07110	0.64	-0.5
1,477,510	+		DZA65_RS07110	0.64	-1.5
1,477,511	-		DZA65_RS07110	0.64	-0.1
1,477,511	-		DZA65_RS07110	0.64	+0.0
1,477,537	+		DZA65_RS07110	0.66	-1.8
1,477,538	-		DZA65_RS07110	0.66	+0.4
1,477,538	-		DZA65_RS07110	0.66	-0.2
1,477,573	+		DZA65_RS07110	0.70	-3.0
1,477,590	+		DZA65_RS07110	0.71	+0.5
1,477,590	+		DZA65_RS07110	0.71	-0.0
1,477,590	+		DZA65_RS07110	0.71	-3.6
1,477,590	+		DZA65_RS07110	0.71	-1.1
1,477,590	+				-0.5
1,477,591	-		DZA65_RS07110	0.71	-1.1
1,477,591	-		DZA65_RS07110	0.71	+0.7
1,477,730	-		DZA65_RS07110	0.84	-0.9
1,477,819	+				-3.0
1,477,819	+				+0.5
1,477,820	-				-0.5
1,477,820	-				-0.8
1,477,864	+				-1.1
1,477,864	+				+0.3
1,477,864	+				-1.2
1,477,865	-				-0.1
1,477,865	-				+1.7
1,477,880	+				-0.5
1,477,880	+				-0.5
1,477,881	-				-0.1
1,477,894	+				+1.5
1,477,895	-				-2.1
1,477,935	+				-1.5
1,477,935	+				-1.5
1,477,935	+				-1.2
1,477,935	+				+0.8
1,477,935	+				-0.2
1,478,007	-				-0.2
1,478,024	+		DZA65_RS07115	0.12	+1.9
1,478,024	+		DZA65_RS07115	0.12	+0.8
1,478,024	+		DZA65_RS07115	0.12	-1.2
1,478,024	+		DZA65_RS07115	0.12	-2.2
1,478,024	+		DZA65_RS07115	0.12	-0.9
1,478,024	+		DZA65_RS07115	0.12	-0.8
1,478,025	-		DZA65_RS07115	0.12	-1.5
1,478,025	-		DZA65_RS07115	0.12	+0.5
1,478,025	-		DZA65_RS07115	0.12	-0.8
1,478,025	-		DZA65_RS07115	0.12	+1.7
1,478,025	-		DZA65_RS07115	0.12	+0.9
1,478,025	-		DZA65_RS07115	0.12	-0.8
1,478,210	-		DZA65_RS07115	0.33	-0.1
1,478,441	+		DZA65_RS07115	0.60	+0.0
1,478,441	+		DZA65_RS07115	0.60	+0.8
1,478,441	+		DZA65_RS07115	0.60	-1.1
1,478,441	+		DZA65_RS07115	0.60	-0.4
1,478,447	+		DZA65_RS07115	0.60	+0.1
1,478,448	-		DZA65_RS07115	0.60	+0.9
1,478,448	-		DZA65_RS07115	0.60	+1.2
1,478,531	+		DZA65_RS07115	0.70	-0.1
1,478,531	+		DZA65_RS07115	0.70	-1.4
1,478,531	+		DZA65_RS07115	0.70	+0.5
1,478,762	+				+1.1
1,478,779	+				+0.5
1,478,781	+				+0.5
1,478,781	+				+0.3
1,478,781	+				+1.5
1,478,781	+				+0.8
1,478,781	+				+0.7
1,478,792	+				+0.9
1,478,807	+				-1.8
1,478,807	+				-1.2