Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS00370

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
86,995	-		DZA65_RS00365	0.42	-0.3
87,072	+		DZA65_RS00365	0.50	-1.3
87,072	+		DZA65_RS00365	0.50	-1.8
87,073	-		DZA65_RS00365	0.50	-2.3
87,073	-		DZA65_RS00365	0.50	-0.6
87,073	-		DZA65_RS00365	0.50	-3.2
87,244	+		DZA65_RS00365	0.69	-1.4
87,274	+		DZA65_RS00365	0.73	-1.0
87,274	+		DZA65_RS00365	0.73	-0.8
87,274	+		DZA65_RS00365	0.73	-1.2
87,275	-		DZA65_RS00365	0.73	-1.2
87,275	-		DZA65_RS00365	0.73	-1.8
87,275	-		DZA65_RS00365	0.73	-1.0
87,275	-		DZA65_RS00365	0.73	-2.4
87,303	+		DZA65_RS00365	0.76	-0.8
87,303	+		DZA65_RS00365	0.76	-2.6
87,303	+		DZA65_RS00365	0.76	-2.9
87,318	+		DZA65_RS00365	0.78	-0.6
87,318	+		DZA65_RS00365	0.78	-2.7
87,318	+		DZA65_RS00365	0.78	-2.4
87,318	+		DZA65_RS00365	0.78	-3.2
87,318	+		DZA65_RS00365	0.78	-1.0
87,319	-		DZA65_RS00365	0.78	-1.7
87,319	-				-0.6
87,319	-		DZA65_RS00365	0.78	-2.2
87,319	-		DZA65_RS00365	0.78	-1.1
87,360	-		DZA65_RS00365	0.82	-3.5
87,372	-		DZA65_RS00365	0.84	-2.3
87,450	+				-0.0
87,450	+				-1.8
87,458	+				-0.0
87,534	+				+0.5
87,535	-				-1.2
87,535	-				+1.7
87,567	-				+0.1
87,571	+				-0.9
87,575	-				-1.3
87,576	+				+1.0
87,581	-				-0.0
87,590	+				+1.2
87,596	+				-0.3
87,597	-				+0.2
87,597	-				-3.3
87,597	-				-2.0
87,597	-				-1.3
87,609	+				+0.5
87,681	+				+0.7
87,681	+				+0.7
87,686	+				+1.0
87,713	-				-2.2
87,724	+				+1.6
87,724	+				+1.4
87,724	+				-0.8
87,725	-				-0.8
87,725	-				-0.2
87,725	-				+0.5
87,725	-				-0.6
87,725	-				+0.8
87,725	-				+0.6
87,760	+				-0.4
87,760	+				-0.2
87,761	-				+0.3
87,761	-				-0.3
87,761	-				-0.8
87,761	-				+1.0
87,761	-				+0.6
87,787	+				-0.1
87,787	+				-0.4
87,788	-				-0.1
87,819	+				+0.8
87,822	-				-0.8
87,822	-				-1.2
87,822	-				-1.0
87,831	+				+0.1
87,831	+				-0.2
87,831	+				-0.6
87,831	+				-1.3
87,831	+				-1.6
87,832	-				-0.8
87,832	-				-1.0
87,832	-				+1.0
87,852	+				-0.9
87,852	+				-2.1
87,852	+				-0.5
87,853	-				-1.9
87,853	-				-0.0
87,853	-				-0.0
87,853	-				+0.2
87,853	-				-1.2
87,853	-				+2.4
87,855	+				+0.2
87,855	+				+1.2
87,855	+				+0.8
87,855	+				+0.2
87,855	+				-1.3
87,856	-				-0.0
87,856	-				-2.0
87,856	-				-0.3
87,856	-				+0.5
87,905	+				-0.4
87,905	+				-1.9
87,906	-				+0.4
87,906	-				-1.6
87,927	+				-0.6
88,080	+		DZA65_RS00370	0.24	+0.6
88,080	+		DZA65_RS00370	0.24	-0.4
88,080	+		DZA65_RS00370	0.24	-0.4
88,080	+		DZA65_RS00370	0.24	-0.3
88,080	+		DZA65_RS00370	0.24	-0.0
88,080	+		DZA65_RS00370	0.24	-0.5
88,080	+		DZA65_RS00370	0.24	+0.4
88,081	-		DZA65_RS00370	0.24	-2.0
88,081	-		DZA65_RS00370	0.24	-0.2
88,081	-		DZA65_RS00370	0.24	-0.4
88,081	-		DZA65_RS00370	0.24	-0.8
88,081	-		DZA65_RS00370	0.24	-0.8
88,081	-		DZA65_RS00370	0.24	+0.2
88,081	-		DZA65_RS00370	0.24	-1.0
88,259	+		DZA65_RS00370	0.42	-1.5
88,259	+		DZA65_RS00370	0.42	-0.2
88,259	+		DZA65_RS00370	0.42	-0.5
88,260	-		DZA65_RS00370	0.42	+0.8
88,260	-		DZA65_RS00370	0.42	-1.2
88,260	-		DZA65_RS00370	0.42	-0.3
88,260	-		DZA65_RS00370	0.42	-0.5
88,288	-		DZA65_RS00370	0.45	-1.0
88,353	+		DZA65_RS00370	0.52	-0.1
88,353	+		DZA65_RS00370	0.52	-1.2
88,353	+		DZA65_RS00370	0.52	+0.7
88,353	+		DZA65_RS00370	0.52	+0.6
88,353	+		DZA65_RS00370	0.52	+0.0
88,354	-		DZA65_RS00370	0.52	+0.7
88,354	-		DZA65_RS00370	0.52	+0.4
88,354	-				-1.0
88,354	-		DZA65_RS00370	0.52	+1.0
88,354	-		DZA65_RS00370	0.52	-0.8
88,381	+		DZA65_RS00370	0.55	-0.1
88,381	+		DZA65_RS00370	0.55	-0.8
88,415	-		DZA65_RS00370	0.59	+2.0
88,415	-		DZA65_RS00370	0.59	-0.6
88,641	+		DZA65_RS00370	0.83	+0.6
88,641	+				-0.0
88,642	-		DZA65_RS00370	0.83	-1.3
88,642	-		DZA65_RS00370	0.83	-0.6
88,642	-		DZA65_RS00370	0.83	-0.3
88,666	+		DZA65_RS00370	0.85	-0.3
88,667	-		DZA65_RS00370	0.85	-0.2
88,719	+				-2.0
88,719	+				-2.2
88,719	+				-0.6
88,719	+				-1.2
88,719	+				-1.2
88,719	+				+0.2
88,719	+				+0.6
88,719	+				+0.8
88,719	+				+1.0
88,720	-				+0.1
88,720	-				+0.2
88,720	-				-0.0
88,720	-				+1.7
88,720	-				-2.3
88,737	+				+1.0
88,738	-				+1.7
88,738	-				-2.5
88,780	+				-1.5
88,780	+				+1.0
88,781	-				-0.2
88,781	-				-0.7
88,781	-				-0.2
88,781	-				-1.5
88,784	+				+1.0
88,784	+				+1.0
88,784	+				-1.0
88,784	+				-2.5
88,784	+				+1.0
88,785	-				-1.2
88,785	-				-2.3
88,785	-				-0.9
88,785	-				-2.2
88,785	-				+0.6
88,804	+				+0.4
88,804	+				-0.7
88,804	+				+0.6
88,804	+				-0.3
88,805	-				-3.5
88,805	-				-0.2
88,805	-				-3.2
88,805	-				-0.2
88,810	+				-1.6
88,810	+				-1.0
88,810	+				-0.8
88,810	+				+0.2
88,810	+				-0.3
88,810	+				-1.1
88,810	+				-0.4
88,810	+				+0.2
88,810	+				+0.1
88,810	+				-0.3
88,810	+				+1.8
88,810	+				-0.3
88,810	+				-2.5
88,810	+				+0.1
88,810	+				-0.5
88,811	-				-2.0
88,811	-				-1.2
88,811	-				-1.3
88,811	-				+1.2
88,811	-				+0.6
88,811	-				-1.6
88,811	-				-0.4
88,811	-				-1.0
88,811	-				-0.3
88,811	-				+0.7
88,811	-				+2.0
88,811	-				-0.6
88,811	-				-0.8
88,811	-				-1.8
88,811	-				-0.2
88,811	-				+0.4
88,811	-				+1.6
88,881	-				+0.2
88,946	+		DZA65_RS00375	0.18	-0.8
88,951	+		DZA65_RS00375	0.19	-1.0
88,951	+		DZA65_RS00375	0.19	-1.7
88,951	+		DZA65_RS00375	0.19	-1.0
88,951	+		DZA65_RS00375	0.19	-1.3
88,951	+		DZA65_RS00375	0.19	-1.0
88,951	+		DZA65_RS00375	0.19	-1.0
88,951	+		DZA65_RS00375	0.19	+0.6
88,951	+		DZA65_RS00375	0.19	-0.6
88,951	+		DZA65_RS00375	0.19	-0.0
88,951	+		DZA65_RS00375	0.19	-0.5
88,951	+		DZA65_RS00375	0.19	-0.2
88,951	+		DZA65_RS00375	0.19	-1.8
88,951	+		DZA65_RS00375	0.19	+0.3
88,951	+		DZA65_RS00375	0.19	+2.4
88,951	+		DZA65_RS00375	0.19	-0.9
88,951	+		DZA65_RS00375	0.19	-0.0
88,951	+		DZA65_RS00375	0.19	+0.5
88,951	+		DZA65_RS00375	0.19	+0.4
88,951	+		DZA65_RS00375	0.19	+1.1
88,951	+		DZA65_RS00375	0.19	+2.0
88,951	+		DZA65_RS00375	0.19	-2.3
88,951	+		DZA65_RS00375	0.19	+1.1
88,952	-		DZA65_RS00375	0.19	-1.3
88,952	-		DZA65_RS00375	0.19	-1.2
88,952	-		DZA65_RS00375	0.19	-0.3
88,952	-		DZA65_RS00375	0.19	-0.3
88,952	-		DZA65_RS00375	0.19	-0.2
88,952	-		DZA65_RS00375	0.19	-0.0
88,952	-		DZA65_RS00375	0.19	-1.2
88,952	-		DZA65_RS00375	0.19	+1.2
88,952	-		DZA65_RS00375	0.19	-1.2
88,952	-		DZA65_RS00375	0.19	+0.4
88,952	-		DZA65_RS00375	0.19	+0.6
88,952	-		DZA65_RS00375	0.19	-0.8
88,952	-		DZA65_RS00375	0.19	-1.2
88,952	-		DZA65_RS00375	0.19	-0.3
88,952	-		DZA65_RS00375	0.19	-1.3
88,952	-		DZA65_RS00375	0.19	-0.6
88,952	-		DZA65_RS00375	0.19	-0.1
88,952	-		DZA65_RS00375	0.19	+0.2
88,952	-		DZA65_RS00375	0.19	-1.2
88,952	-		DZA65_RS00375	0.19	-0.7
88,952	-		DZA65_RS00375	0.19	+0.8
88,952	-		DZA65_RS00375	0.19	+0.7
88,952	-		DZA65_RS00375	0.19	-2.0
88,952	-		DZA65_RS00375	0.19	-2.2
88,955	+		DZA65_RS00375	0.20	+1.2
88,955	+		DZA65_RS00375	0.20	-0.2
88,955	+		DZA65_RS00375	0.20	+0.0
88,955	+		DZA65_RS00375	0.20	+0.3
88,955	+		DZA65_RS00375	0.20	+0.4
88,955	+		DZA65_RS00375	0.20	-0.1
88,955	+		DZA65_RS00375	0.20	+1.6
88,955	+		DZA65_RS00375	0.20	+0.2
88,955	+		DZA65_RS00375	0.20	+0.7
88,955	+		DZA65_RS00375	0.20	-1.0
88,955	+		DZA65_RS00375	0.20	+1.2
88,955	+		DZA65_RS00375	0.20	+0.2
88,956	-		DZA65_RS00375	0.20	-0.2
88,956	-		DZA65_RS00375	0.20	+0.8
88,956	-		DZA65_RS00375	0.20	+0.3
88,956	-		DZA65_RS00375	0.20	-0.0
88,956	-		DZA65_RS00375	0.20	-0.2
88,956	-		DZA65_RS00375	0.20	-0.2
88,956	-		DZA65_RS00375	0.20	-2.2
89,034	+		DZA65_RS00375	0.31	-0.0
89,034	+		DZA65_RS00375	0.31	-0.0
89,035	-		DZA65_RS00375	0.31	-1.2
89,131	-		DZA65_RS00375	0.45	+0.4
89,158	+		DZA65_RS00375	0.49	-0.6
89,158	+		DZA65_RS00375	0.49	+1.0
89,158	+		DZA65_RS00375	0.49	-1.0
89,158	+		DZA65_RS00375	0.49	+1.2
89,158	+		DZA65_RS00375	0.49	-0.5
89,159	-		DZA65_RS00375	0.49	-0.6
89,159	-		DZA65_RS00375	0.49	+0.8
89,159	-		DZA65_RS00375	0.49	+0.3
89,159	-		DZA65_RS00375	0.49	+0.4
89,159	-		DZA65_RS00375	0.49	+2.4
89,159	-		DZA65_RS00375	0.49	-1.6
89,159	-		DZA65_RS00375	0.49	-0.2
89,197	+		DZA65_RS00375	0.55	-0.0
89,198	-		DZA65_RS00375	0.55	+0.2
89,205	+		DZA65_RS00375	0.56	+0.2
89,205	+		DZA65_RS00375	0.56	+1.6
89,205	+		DZA65_RS00375	0.56	-0.5
89,205	+		DZA65_RS00375	0.56	+1.3
89,205	+		DZA65_RS00375	0.56	+1.0
89,205	+		DZA65_RS00375	0.56	+0.6
89,205	+		DZA65_RS00375	0.56	-0.2
89,205	+		DZA65_RS00375	0.56	-0.0
89,206	-		DZA65_RS00375	0.56	-0.7
89,206	-		DZA65_RS00375	0.56	-0.4
89,206	-		DZA65_RS00375	0.56	-1.2
89,206	-		DZA65_RS00375	0.56	-0.0
89,206	-		DZA65_RS00375	0.56	-1.1
89,378	+		DZA65_RS00375	0.81	-0.2
89,408	+		DZA65_RS00375	0.85	-1.0
89,438	+		DZA65_RS00375	0.89	-0.3
89,438	+		DZA65_RS00375	0.89	-0.3
89,439	-		DZA65_RS00375	0.90	-1.2
89,439	-		DZA65_RS00375	0.90	+0.1
89,439	-		DZA65_RS00375	0.90	+0.5
89,452	+				-0.3
89,474	-				-1.5
89,476	+				+0.1
89,476	+				+1.4
89,477	-				-0.8
89,502	+				-1.5
89,503	-				-0.3
89,592	+				+1.0
89,593	-				+0.2
89,593	-				-0.3
89,593	-				-1.8
89,595	-				+1.4
89,614	+				+0.5
89,647	+				+0.6
89,648	-				-0.0
89,648	-				-1.3
89,683	-				+1.1
89,683	-				-0.4
89,683	-				-1.0
89,710	+				-0.4
89,722	-				-1.6
89,754	-				-1.3
89,788	+				-1.6
89,789	-				-1.8