Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS00135

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
31,104	+		DZA65_RS00130	0.40	+1.0
31,123	+		DZA65_RS00130	0.43	-0.6
31,138	+		DZA65_RS00130	0.44	-1.1
31,138	+		DZA65_RS00130	0.44	+0.5
31,139	-		DZA65_RS00130	0.44	+0.6
31,162	+		DZA65_RS00130	0.47	-0.4
31,221	+		DZA65_RS00130	0.54	+1.8
31,221	+		DZA65_RS00130	0.54	-2.5
31,222	-		DZA65_RS00130	0.54	-0.8
31,235	+		DZA65_RS00130	0.55	+0.2
31,235	+		DZA65_RS00130	0.55	+0.4
31,235	+		DZA65_RS00130	0.55	+0.2
31,235	+		DZA65_RS00130	0.55	+0.6
31,235	+		DZA65_RS00130	0.55	-3.3
31,236	-		DZA65_RS00130	0.55	+1.6
31,236	-		DZA65_RS00130	0.55	-0.3
31,236	-		DZA65_RS00130	0.55	-0.9
31,236	-		DZA65_RS00130	0.55	-0.0
31,236	-		DZA65_RS00130	0.55	-1.3
31,236	-		DZA65_RS00130	0.55	+0.4
31,236	-		DZA65_RS00130	0.55	-1.2
31,236	-		DZA65_RS00130	0.55	+0.5
31,259	-		DZA65_RS00130	0.58	+0.4
31,312	+		DZA65_RS00130	0.64	-2.3
31,312	+		DZA65_RS00130	0.64	-0.4
31,312	+		DZA65_RS00130	0.64	-1.3
31,312	+		DZA65_RS00130	0.64	-1.0
31,312	+		DZA65_RS00130	0.64	+0.1
31,313	-		DZA65_RS00130	0.64	-0.0
31,313	-		DZA65_RS00130	0.64	+1.6
31,341	+		DZA65_RS00130	0.67	+0.7
31,341	+		DZA65_RS00130	0.67	-0.0
31,341	+		DZA65_RS00130	0.67	+0.1
31,341	+		DZA65_RS00130	0.67	-0.2
31,341	+		DZA65_RS00130	0.67	+2.0
31,341	+		DZA65_RS00130	0.67	+0.1
31,342	-		DZA65_RS00130	0.67	-1.8
31,378	+		DZA65_RS00130	0.71	-1.0
31,379	-		DZA65_RS00130	0.71	-0.6
31,379	-		DZA65_RS00130	0.71	+0.5
31,379	-		DZA65_RS00130	0.71	+0.4
31,379	-		DZA65_RS00130	0.71	+0.4
31,435	+		DZA65_RS00130	0.77	+0.6
31,435	+		DZA65_RS00130	0.77	-1.2
31,435	+		DZA65_RS00130	0.77	+0.2
31,435	+		DZA65_RS00130	0.77	+1.1
31,435	+		DZA65_RS00130	0.77	+0.6
31,435	+				+0.6
31,435	+		DZA65_RS00130	0.77	+2.0
31,435	+		DZA65_RS00130	0.77	-2.0
31,436	-		DZA65_RS00130	0.77	+0.2
31,436	-		DZA65_RS00130	0.77	-0.0
31,436	-		DZA65_RS00130	0.77	+1.3
31,436	-		DZA65_RS00130	0.77	+1.0
31,436	-		DZA65_RS00130	0.77	-0.6
31,436	-		DZA65_RS00130	0.77	+0.3
31,436	-		DZA65_RS00130	0.77	-2.0
31,436	-		DZA65_RS00130	0.77	+0.4
31,436	-		DZA65_RS00130	0.77	+0.3
31,436	-		DZA65_RS00130	0.77	-1.2
31,436	-		DZA65_RS00130	0.77	+0.0
31,447	+		DZA65_RS00130	0.79	+0.2
31,447	+		DZA65_RS00130	0.79	-0.6
31,447	+		DZA65_RS00130	0.79	-0.5
31,448	-		DZA65_RS00130	0.79	-0.3
31,448	-		DZA65_RS00130	0.79	-1.6
31,448	-		DZA65_RS00130	0.79	+0.5
31,489	+		DZA65_RS00130	0.83	+1.8
31,490	-		DZA65_RS00130	0.84	-2.6
31,519	+		DZA65_RS00130	0.87	-1.3
31,519	+		DZA65_RS00130	0.87	-0.7
31,520	-		DZA65_RS00130	0.87	-1.0
31,520	-		DZA65_RS00130	0.87	+0.4
31,528	+		DZA65_RS00130	0.88	-0.1
31,528	+		DZA65_RS00130	0.88	-0.3
31,529	-		DZA65_RS00130	0.88	+0.3
31,529	-		DZA65_RS00130	0.88	-0.2
31,571	+				-0.1
31,571	+				+0.6
31,603	+				+0.3
31,603	+				-0.3
31,612	+				+0.5
31,612	+				+1.0
31,612	+				+0.2
31,612	+				+0.1
31,636	-				-1.3
31,652	+				-0.0
31,652	+				+0.6
31,672	+				+0.2
31,672	+				+1.0
31,672	+				-1.6
31,673	-				-0.2
31,673	-				+0.4
31,674	+				-1.3
31,674	+				+0.7
31,674	+				+0.7
31,674	+				-0.1
31,674	+				-0.2
31,674	+				-0.2
31,674	+				+0.1
31,674	+				-1.0
31,674	+				-0.0
31,674	+				-0.2
31,674	+				+1.3
31,674	+				+0.4
31,674	+				-0.8
31,674	+				+1.2
31,674	+				+0.6
31,674	+				+0.1
31,674	+				-0.1
31,674	+				+0.3
31,674	+				+0.2
31,674	+				+1.0
31,675	-				-0.3
31,675	-				-0.1
31,675	-				+0.6
31,675	-				-0.2
31,675	-				-1.1
31,675	-				+0.3
31,675	-				-1.5
31,675	-				-1.3
31,675	-				-0.3
31,675	-				+0.6
31,675	-				-0.3
31,675	-				-2.0
31,675	-				-1.3
31,678	+				-1.0
31,678	+				-0.8
31,678	+				+0.3
31,678	+				+0.7
31,678	+				-0.2
31,678	+				-1.8
31,678	+				+0.6
31,678	+				-0.9
31,679	-				+0.3
31,679	-				-2.0
31,679	-				+0.3
31,679	-				+0.3
31,722	-				+0.3
31,833	+				-1.0
31,833	+				+0.2
31,833	+				+2.1
31,834	-				-0.0
31,861	+				+0.1
31,861	+				-0.1
31,861	+				-0.5
31,861	+				-0.0
31,861	+				+0.9
31,861	+				+0.2
31,861	+				-0.2
31,862	-				-0.1
31,862	-				-1.2
31,862	-				-2.7
31,862	-				-1.2
31,862	-				+0.6
31,862	-				-0.3
31,862	-				+0.6
31,889	-				-0.8
31,967	+				-0.0
31,967	+				-2.2
31,968	-				-2.2
31,968	-				-0.5
31,968	-				-2.0
31,968	-				-0.8
31,984	+				-2.3
31,984	+				-1.6
31,984	+				+3.2
31,984	+				-0.0
31,984	+				+1.0
31,985	-				+0.8
31,985	-				-0.0
31,985	-				-1.0
31,985	-				-0.9
31,985	-				+1.2
31,985	-				+0.7
31,985	-				-1.2
31,985	-				-1.3
31,996	+				+2.0
31,996	+				-1.1
31,996	+				-0.0
31,997	-				-0.8
31,997	-				+0.8
31,997	-				+0.6
32,042	+				-1.4
32,042	+				+1.4
32,042	+				-1.8
32,042	+				-1.3
32,043	-				+1.3
32,043	-				+0.6
32,043	-				-2.5
32,043	-				+0.6
32,043	-				-1.6
32,103	-				-0.0
32,153	+		DZA65_RS00135	0.17	+1.3
32,237	+		DZA65_RS00135	0.35	+1.0
32,237	+		DZA65_RS00135	0.35	+0.6
32,237	+		DZA65_RS00135	0.35	-2.3
32,237	+		DZA65_RS00135	0.35	-1.2
32,237	+		DZA65_RS00135	0.35	-0.0
32,237	+		DZA65_RS00135	0.35	+0.6
32,237	+		DZA65_RS00135	0.35	+1.6
32,238	-		DZA65_RS00135	0.35	+0.3
32,238	-		DZA65_RS00135	0.35	-0.2
32,238	-		DZA65_RS00135	0.35	-0.3
32,238	-		DZA65_RS00135	0.35	-1.3
32,238	-		DZA65_RS00135	0.35	+1.7
32,238	-		DZA65_RS00135	0.35	-0.2
32,238	-		DZA65_RS00135	0.35	+0.6
32,238	-		DZA65_RS00135	0.35	-0.1
32,238	-		DZA65_RS00135	0.35	+1.2
32,238	-		DZA65_RS00135	0.35	+0.7
32,238	-		DZA65_RS00135	0.35	-1.0
32,238	-		DZA65_RS00135	0.35	-0.5
32,238	-		DZA65_RS00135	0.35	+1.2
32,238	-		DZA65_RS00135	0.35	-0.4
32,310	+		DZA65_RS00135	0.50	-0.1
32,310	+		DZA65_RS00135	0.50	-0.1
32,310	+		DZA65_RS00135	0.50	+0.2
32,310	+		DZA65_RS00135	0.50	+1.7
32,310	+		DZA65_RS00135	0.50	+0.2
32,310	+		DZA65_RS00135	0.50	+0.4
32,310	+		DZA65_RS00135	0.50	-0.0
32,310	+		DZA65_RS00135	0.50	+0.7
32,311	-		DZA65_RS00135	0.50	+0.4
32,311	-		DZA65_RS00135	0.50	+0.5
32,311	-				+0.6
32,311	-		DZA65_RS00135	0.50	-1.6
32,311	-		DZA65_RS00135	0.50	+0.2
32,317	-		DZA65_RS00135	0.52	+0.6
32,317	-		DZA65_RS00135	0.52	-0.5
32,317	-		DZA65_RS00135	0.52	+1.0
32,317	-		DZA65_RS00135	0.52	-1.2
32,370	+		DZA65_RS00135	0.63	+0.8
32,371	-		DZA65_RS00135	0.63	-0.6
32,419	+		DZA65_RS00135	0.74	-1.4
32,435	+		DZA65_RS00135	0.77	+1.7
32,474	+		DZA65_RS00135	0.85	-1.2
32,475	-		DZA65_RS00135	0.85	+0.2
32,504	+				-0.2
32,504	+				-0.4
32,504	+				-0.0
32,505	-				+0.5
32,505	-				+0.4
32,563	-				+0.6
32,572	+				-2.0
32,572	+				+1.5
32,593	-				+1.3
32,643	+				-0.3
32,643	+				+0.4
32,643	+				-0.3
32,644	-				+0.5
32,644	-				-0.3
32,644	-				-0.0
32,644	-				+1.0
32,644	-				-1.7
32,671	+				-1.5
32,671	+				-2.0
32,672	-				-0.4
32,672	-				+0.2
32,672	-				-0.4
33,003	+		DZA65_RS00140	0.84	+0.3
33,003	+		DZA65_RS00140	0.84	+0.5
33,003	+		DZA65_RS00140	0.84	-0.4
33,004	-		DZA65_RS00140	0.84	+1.2
33,004	-		DZA65_RS00140	0.84	-0.5
33,004	-		DZA65_RS00140	0.84	+0.8
33,004	-		DZA65_RS00140	0.84	+1.1
33,012	+		DZA65_RS00140	0.86	-1.0
33,012	+		DZA65_RS00140	0.86	-0.2
33,012	+		DZA65_RS00140	0.86	-2.0
33,012	+		DZA65_RS00140	0.86	-1.7
33,013	-		DZA65_RS00140	0.86	+0.2
33,013	-		DZA65_RS00140	0.86	-1.0
33,013	-		DZA65_RS00140	0.86	+0.2
33,013	-		DZA65_RS00140	0.86	-0.2
33,013	-				-1.3
33,015	+		DZA65_RS00140	0.87	-0.8
33,015	+		DZA65_RS00140	0.87	+2.0
33,015	+		DZA65_RS00140	0.87	-0.1
33,015	+		DZA65_RS00140	0.87	-1.3
33,016	-		DZA65_RS00140	0.87	-0.2
33,016	-		DZA65_RS00140	0.87	+0.5
33,016	-		DZA65_RS00140	0.87	+0.7
33,074	-				+0.2
33,104	-				+0.3
33,106	-				-0.6
33,161	+				+0.3
33,161	+				+0.6
33,161	+				-2.1
33,161	+				-0.6
33,161	+				+0.7
33,161	+				-1.8
33,161	+				+0.3
33,161	+				+0.2
33,161	+				+0.6
33,161	+				+1.7
33,161	+				-0.0
33,161	+				-1.5
33,161	+				-1.9
33,162	-				+0.2
33,162	-				-1.8
33,162	-				-0.0
33,162	-				-2.8
33,162	-				+0.8
33,162	-				+0.5
33,162	-				+1.8
33,162	-				-1.0
33,162	-				+0.7
33,162	-				+0.5
33,162	-				-0.8
33,180	+				+1.0
33,180	+				+1.6
33,180	+				+0.0
33,180	+				-0.6
33,180	+				+1.3
33,180	+				+0.6
33,181	-				+2.6
33,181	-				+0.1
33,181	-				+0.1
33,181	-				+0.2
33,181	-				-0.6
33,181	-				-0.0
33,181	-				-0.0
33,181	-				+0.5
33,181	-				-0.8
33,181	-				-0.1
33,213	-				+0.7
33,218	+				+0.2
33,218	+				-0.3
33,218	+				+0.4
33,218	+				-2.7
33,218	+				+0.4
33,218	+				-0.3
33,219	-				+0.1
33,219	-				-0.8
33,219	-				+0.3
33,219	-				+0.3
33,219	-				+0.4
33,219	-				-0.4
33,226	-				+0.1
33,236	+				-0.8
33,236	+				-0.7
33,236	+				+0.9
33,320	+		DZA65_RS00145	0.35	+0.8
33,320	+		DZA65_RS00145	0.35	-0.8
33,320	+		DZA65_RS00145	0.35	-0.4
33,332	+		DZA65_RS00145	0.39	-1.6
33,476	+		DZA65_RS00145	0.88	-0.2
33,476	+		DZA65_RS00145	0.88	-2.8
33,476	+		DZA65_RS00145	0.88	-0.0
33,476	+		DZA65_RS00145	0.88	-0.8
33,476	+		DZA65_RS00145	0.88	-0.3
33,476	+		DZA65_RS00145	0.88	-0.3
33,477	-		DZA65_RS00145	0.89	+0.1
33,477	-		DZA65_RS00145	0.89	-0.6
33,477	-		DZA65_RS00145	0.89	+2.0
33,477	-		DZA65_RS00145	0.89	-1.3
33,477	-		DZA65_RS00145	0.89	+0.4
33,477	-		DZA65_RS00145	0.89	+0.1
33,477	-		DZA65_RS00145	0.89	+1.7
33,477	-		DZA65_RS00145	0.89	+0.8
33,477	-		DZA65_RS00145	0.89	-1.6
33,477	-		DZA65_RS00145	0.89	+0.2
33,517	+				+0.2
33,517	+				-0.5
33,517	+				+2.0
33,518	-				-1.6
33,518	-				+1.0
33,518	-				+0.2