Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22540

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,874,041	+		DZA65_RS22530	0.82	-0.8
4,874,042	-		DZA65_RS22530	0.82	-1.1
4,874,042	-		DZA65_RS22530	0.82	+0.1
4,874,042	-		DZA65_RS22530	0.82	+0.9
4,874,042	-		DZA65_RS22530	0.82	+0.2
4,874,042	-		DZA65_RS22530	0.82	+0.6
4,874,042	-		DZA65_RS22530	0.82	-1.1
4,874,043	+		DZA65_RS22530	0.82	+0.9
4,874,054	+		DZA65_RS22530	0.83	+1.0
4,874,055	-		DZA65_RS22530	0.83	-0.4
4,874,055	-		DZA65_RS22530	0.83	+0.4
4,874,161	-				+0.7
4,874,172	-				-2.1
4,874,216	+				-0.1
4,874,217	-				-0.3
4,874,234	+				-2.6
4,874,249	+				-1.4
4,874,249	+				-0.1
4,874,249	+				+0.9
4,874,249	+				-0.8
4,874,249	+				-0.1
4,874,249	+				+1.4
4,874,249	+				-0.1
4,874,249	+				-0.7
4,874,249	+				-0.6
4,874,250	-				+0.3
4,874,250	-				-0.3
4,874,250	-				-2.2
4,874,250	-				+0.5
4,874,250	-				+1.3
4,874,250	-				-0.5
4,874,253	-				-0.0
4,874,280	-				+2.1
4,874,305	+		DZA65_RS22535	0.10	+0.1
4,874,305	+				-0.7
4,874,305	+		DZA65_RS22535	0.10	+0.9
4,874,305	+		DZA65_RS22535	0.10	-0.4
4,874,305	+		DZA65_RS22535	0.10	-0.7
4,874,306	-		DZA65_RS22535	0.10	+0.0
4,874,306	-		DZA65_RS22535	0.10	+0.7
4,874,306	-		DZA65_RS22535	0.10	-0.3
4,874,306	-		DZA65_RS22535	0.10	-0.3
4,874,306	-		DZA65_RS22535	0.10	-0.4
4,874,306	-		DZA65_RS22535	0.10	-2.2
4,874,309	+		DZA65_RS22535	0.11	+0.5
4,874,309	+		DZA65_RS22535	0.11	+0.6
4,874,310	-		DZA65_RS22535	0.12	-0.1
4,874,310	-		DZA65_RS22535	0.12	+0.5
4,874,311	+		DZA65_RS22535	0.12	-0.1
4,874,311	+		DZA65_RS22535	0.12	-2.5
4,874,311	+		DZA65_RS22535	0.12	+1.3
4,874,311	+		DZA65_RS22535	0.12	+0.6
4,874,311	+		DZA65_RS22535	0.12	+0.1
4,874,312	-		DZA65_RS22535	0.12	-0.1
4,874,312	-		DZA65_RS22535	0.12	-1.1
4,874,380	+		DZA65_RS22535	0.36	+0.3
4,874,380	+		DZA65_RS22535	0.36	+0.6
4,874,380	+		DZA65_RS22535	0.36	-0.4
4,874,380	+		DZA65_RS22535	0.36	-2.5
4,874,380	+		DZA65_RS22535	0.36	+0.3
4,874,380	+		DZA65_RS22535	0.36	-0.6
4,874,380	+		DZA65_RS22535	0.36	-0.1
4,874,380	+		DZA65_RS22535	0.36	-0.4
4,874,380	+		DZA65_RS22535	0.36	-0.0
4,874,380	+		DZA65_RS22535	0.36	+2.5
4,874,380	+		DZA65_RS22535	0.36	+0.1
4,874,381	-		DZA65_RS22535	0.36	-0.9
4,874,381	-		DZA65_RS22535	0.36	+0.4
4,874,381	-		DZA65_RS22535	0.36	+0.2
4,874,381	-		DZA65_RS22535	0.36	-0.2
4,874,381	-		DZA65_RS22535	0.36	-0.6
4,874,381	-		DZA65_RS22535	0.36	-0.2
4,874,381	-		DZA65_RS22535	0.36	+0.5
4,874,381	-		DZA65_RS22535	0.36	+0.3
4,874,381	-		DZA65_RS22535	0.36	-0.8
4,874,381	-		DZA65_RS22535	0.36	+0.3
4,874,381	-		DZA65_RS22535	0.36	-0.4
4,874,381	-		DZA65_RS22535	0.36	-0.9
4,874,382	+		DZA65_RS22535	0.37	-1.2
4,874,382	+		DZA65_RS22535	0.37	-1.7
4,874,383	-				-0.7
4,874,417	+		DZA65_RS22535	0.49	+0.5
4,874,418	-		DZA65_RS22535	0.49	-0.4
4,874,418	-		DZA65_RS22535	0.49	-1.0
4,874,418	-		DZA65_RS22535	0.49	-3.2
4,874,426	+		DZA65_RS22535	0.52	-0.4
4,874,426	+		DZA65_RS22535	0.52	+0.3
4,874,426	+		DZA65_RS22535	0.52	-1.5
4,874,426	+		DZA65_RS22535	0.52	+1.3
4,874,426	+		DZA65_RS22535	0.52	+2.6
4,874,426	+		DZA65_RS22535	0.52	+0.1
4,874,426	+		DZA65_RS22535	0.52	-0.5
4,874,427	-		DZA65_RS22535	0.52	-0.7
4,874,427	-		DZA65_RS22535	0.52	+0.5
4,874,427	-		DZA65_RS22535	0.52	+0.5
4,874,427	-		DZA65_RS22535	0.52	-0.4
4,874,433	+		DZA65_RS22535	0.55	-1.4
4,874,434	-		DZA65_RS22535	0.55	+0.8
4,874,458	+		DZA65_RS22535	0.63	+0.4
4,874,459	-		DZA65_RS22535	0.64	-1.2
4,874,464	-		DZA65_RS22535	0.65	+0.1
4,874,464	-		DZA65_RS22535	0.65	+0.8
4,874,485	+		DZA65_RS22535	0.73	+0.8
4,874,485	+		DZA65_RS22535	0.73	+0.3
4,874,485	+		DZA65_RS22535	0.73	-0.5
4,874,485	+		DZA65_RS22535	0.73	+1.4
4,874,485	+		DZA65_RS22535	0.73	-1.9
4,874,486	-		DZA65_RS22535	0.73	-1.7
4,874,486	-		DZA65_RS22535	0.73	+0.4
4,874,486	-		DZA65_RS22535	0.73	-0.3
4,874,486	-		DZA65_RS22535	0.73	+0.8
4,874,486	-		DZA65_RS22535	0.73	-0.3
4,874,494	+		DZA65_RS22535	0.76	+1.8
4,874,494	+		DZA65_RS22535	0.76	-1.4
4,874,494	+		DZA65_RS22535	0.76	-0.1
4,874,494	+		DZA65_RS22535	0.76	+2.6
4,874,494	+		DZA65_RS22535	0.76	-0.7
4,874,494	+		DZA65_RS22535	0.76	-1.4
4,874,495	-		DZA65_RS22535	0.76	-0.1
4,874,495	-		DZA65_RS22535	0.76	+1.3
4,874,495	-		DZA65_RS22535	0.76	-1.2
4,874,495	-		DZA65_RS22535	0.76	+0.4
4,874,495	-		DZA65_RS22535	0.76	+0.2
4,874,495	-		DZA65_RS22535	0.76	+1.3
4,874,495	-		DZA65_RS22535	0.76	-2.7
4,874,495	-		DZA65_RS22535	0.76	-0.1
4,874,495	-		DZA65_RS22535	0.76	-0.9
4,874,495	-		DZA65_RS22535	0.76	+2.5
4,874,495	-		DZA65_RS22535	0.76	+0.9
4,874,530	+		DZA65_RS22535	0.88	-0.2
4,874,530	+		DZA65_RS22535	0.88	-0.1
4,874,531	-		DZA65_RS22535	0.89	+0.4
4,874,548	+				+0.2
4,874,548	+				+2.9
4,874,598	+				+1.5
4,874,727	+				+0.9
4,874,727	+				-1.9
4,874,727	+				+0.3
4,874,727	+				+0.6
4,874,727	+				-0.1
4,874,727	+				+0.3
4,874,727	+				+0.0
4,874,727	+				-1.1
4,874,727	+				-0.5
4,874,727	+				+0.9
4,874,727	+				-0.7
4,874,728	-				-0.5
4,874,728	-				+0.3
4,874,728	-				-0.1
4,874,728	-				-0.4
4,874,728	-				-0.1
4,874,728	-				-1.1
4,874,728	-				-0.8
4,874,728	-				+0.5
4,874,738	+				-0.3
4,874,738	+				-1.1
4,874,739	-				-0.3
4,874,742	+				-0.1
4,874,742	+				-1.4
4,874,742	+				-0.7
4,874,742	+				-2.7
4,874,742	+				+1.9
4,874,742	+				+0.9
4,874,742	+				+1.5
4,874,742	+				-1.2
4,874,742	+				+0.8
4,874,743	-				-0.7
4,874,743	-				+0.9
4,874,743	-				-0.1
4,874,743	-				-1.4
4,874,743	-				+0.2
4,874,743	-				-1.3
4,874,743	-				+1.1
4,874,743	-				+1.7
4,874,743	-				+1.2
4,874,743	-				-0.4
4,874,783	+				+0.7
4,874,783	+				-1.2
4,874,783	+				-0.9
4,874,783	+				-0.4
4,874,783	+				+0.7
4,874,784	-				+0.1
4,874,784	-				+0.5
4,874,784	-				+1.0
4,874,784	-				-2.1
4,874,789	+				-0.6
4,874,789	+				+0.9
4,874,789	+				+0.3
4,874,789	+				+2.8
4,874,789	+				-2.0
4,874,789	+				-0.5
4,874,789	+				-1.1
4,874,790	-				-0.4
4,874,790	-				-0.9
4,874,790	-				+1.7
4,874,790	-				-0.8
4,874,790	-				-0.2
4,874,790	-				-0.3
4,874,790	-				+0.3
4,874,790	-				-0.4
4,874,790	-				+2.4
4,874,791	+				-0.9
4,874,792	-				-1.5
4,874,803	+				-0.7
4,874,804	-				+1.2
4,874,809	-				-2.5
4,874,810	+				-0.3
4,874,810	+				+1.4
4,874,811	-				-1.4
4,874,822	+				-1.5
4,874,822	+				-1.2
4,874,823	-				+0.7
4,874,849	+				-0.5
4,874,884	+				-0.9
4,874,885	-				-1.7
4,874,885	-				+0.2
4,874,885	-				-1.7
4,874,885	-				+0.6
4,874,891	+				+0.7
4,874,898	+				-0.7
4,874,898	+				-0.8
4,874,899	-				-1.4
4,874,899	-				+0.4
4,874,917	+				-0.1
4,874,917	+				-1.9
4,874,917	+				+0.0
4,874,917	+				-1.4
4,874,917	+				+1.1
4,874,917	+				+1.1
4,874,918	-				-0.7
4,874,918	-				+1.1
4,874,937	+				-0.7
4,874,937	+				-0.7
4,874,937	+				-0.4
4,874,938	-				-2.4
4,874,938	-				-1.1
4,874,938	-				+0.7
4,874,938	-				-1.9
4,874,948	+				+0.9
4,874,955	+				+0.3
4,874,955	+				+0.1
4,874,955	+				-0.8
4,874,955	+				-0.5
4,874,955	+				+0.2
4,874,955	+				+0.3
4,874,955	+				+1.3
4,874,955	+				-0.9
4,874,955	+				-1.9
4,874,955	+				+0.3
4,874,955	+				-0.0
4,874,956	-				-1.6
4,874,956	-				-0.5
4,874,956	-				-0.2
4,874,956	-				+0.3
4,874,956	-				+0.3
4,874,967	+				-0.7
4,874,968	-				+0.0
4,874,968	-				+2.6
4,874,975	+				+0.6
4,874,975	+				-3.0
4,874,975	+				+0.1
4,874,975	+				-0.7
4,874,975	+				-1.1
4,874,975	+				-0.3
4,874,975	+				-0.6
4,874,975	+				+1.1
4,874,975	+				+1.9
4,874,975	+				+0.5
4,874,975	+				-0.2
4,874,976	-				-0.5
4,874,976	-				+0.4
4,874,976	-				-0.5
4,874,976	-				+0.7
4,874,976	-				-0.7
4,874,976	-				+0.9
4,874,976	-				+1.4
4,874,979	+				+0.9
4,874,996	+				-0.2
4,874,996	+				-0.6
4,875,005	+				+0.9
4,875,005	+				-0.2
4,875,005	+				-0.5
4,875,005	+				+0.3
4,875,005	+				-0.1
4,875,005	+				+1.2
4,875,006	-				+1.3
4,875,006	-				-1.5
4,875,006	-				-0.1
4,875,012	-				-0.9
4,875,027	-				+1.6
4,875,117	+		DZA65_RS22540	0.12	-0.1
4,875,117	+		DZA65_RS22540	0.12	-0.2
4,875,138	+		DZA65_RS22540	0.14	+1.4
4,875,139	-		DZA65_RS22540	0.14	+0.3
4,875,164	+		DZA65_RS22540	0.16	-0.7
4,875,164	+		DZA65_RS22540	0.16	+0.4
4,875,164	+		DZA65_RS22540	0.16	-0.3
4,875,164	+		DZA65_RS22540	0.16	-1.7
4,875,165	-		DZA65_RS22540	0.16	+0.5
4,875,165	-		DZA65_RS22540	0.16	+1.6
4,875,165	-		DZA65_RS22540	0.16	-1.8
4,875,165	-		DZA65_RS22540	0.16	+0.1
4,875,165	-		DZA65_RS22540	0.16	+0.8
4,875,165	-		DZA65_RS22540	0.16	-2.4
4,875,165	-		DZA65_RS22540	0.16	-0.9
4,875,168	+		DZA65_RS22540	0.16	-1.7
4,875,168	+		DZA65_RS22540	0.16	-0.7
4,875,168	+		DZA65_RS22540	0.16	+0.8
4,875,168	+		DZA65_RS22540	0.16	-0.5
4,875,168	+		DZA65_RS22540	0.16	-0.7
4,875,169	-		DZA65_RS22540	0.17	+0.1
4,875,169	-		DZA65_RS22540	0.17	+0.1
4,875,169	-		DZA65_RS22540	0.17	-0.2
4,875,169	-		DZA65_RS22540	0.17	-0.2
4,875,169	-		DZA65_RS22540	0.17	-1.1
4,875,310	+		DZA65_RS22540	0.30	+0.1
4,875,311	-		DZA65_RS22540	0.30	-0.1
4,875,311	-		DZA65_RS22540	0.30	+1.3
4,875,311	-		DZA65_RS22540	0.30	+0.7
4,875,381	+		DZA65_RS22540	0.37	+0.3
4,875,381	+		DZA65_RS22540	0.37	+0.2
4,875,381	+		DZA65_RS22540	0.37	-1.2
4,875,381	+				+0.9
4,875,381	+		DZA65_RS22540	0.37	-1.1
4,875,381	+		DZA65_RS22540	0.37	-0.2
4,875,381	+		DZA65_RS22540	0.37	-0.3
4,875,381	+		DZA65_RS22540	0.37	-0.5
4,875,381	+		DZA65_RS22540	0.37	-0.3
4,875,381	+		DZA65_RS22540	0.37	-0.7
4,875,382	-		DZA65_RS22540	0.37	+0.5
4,875,382	-		DZA65_RS22540	0.37	-0.8
4,875,382	-		DZA65_RS22540	0.37	-0.1
4,875,382	-		DZA65_RS22540	0.37	+0.6
4,875,382	-		DZA65_RS22540	0.37	+0.9
4,875,382	-		DZA65_RS22540	0.37	+1.4
4,875,469	+		DZA65_RS22540	0.45	+0.2
4,875,469	+		DZA65_RS22540	0.45	-0.8
4,875,469	+		DZA65_RS22540	0.45	-0.7
4,875,469	+		DZA65_RS22540	0.45	-1.1
4,875,469	+		DZA65_RS22540	0.45	-0.5
4,875,470	-		DZA65_RS22540	0.45	-1.2
4,875,470	-		DZA65_RS22540	0.45	-0.9
4,875,470	-		DZA65_RS22540	0.45	+0.9
4,875,491	+		DZA65_RS22540	0.47	+0.0
4,875,498	+		DZA65_RS22540	0.48	+0.7
4,875,498	+		DZA65_RS22540	0.48	-0.3
4,875,498	+		DZA65_RS22540	0.48	+0.7
4,875,498	+		DZA65_RS22540	0.48	+0.2
4,875,498	+		DZA65_RS22540	0.48	+0.9
4,875,499	-		DZA65_RS22540	0.48	+0.9
4,875,499	-		DZA65_RS22540	0.48	+0.5
4,875,499	-		DZA65_RS22540	0.48	-1.1
4,875,499	-		DZA65_RS22540	0.48	-1.2
4,875,499	-		DZA65_RS22540	0.48	-1.1
4,875,499	-		DZA65_RS22540	0.48	+0.9
4,875,499	-		DZA65_RS22540	0.48	+2.3
4,875,499	-		DZA65_RS22540	0.48	-0.4
4,875,499	-		DZA65_RS22540	0.48	-0.7
4,875,513	+		DZA65_RS22540	0.50	-0.9
4,875,513	+		DZA65_RS22540	0.50	+1.2
4,875,513	+		DZA65_RS22540	0.50	+0.7
4,875,513	+		DZA65_RS22540	0.50	+0.1
4,875,514	-		DZA65_RS22540	0.50	-1.7
4,875,514	-		DZA65_RS22540	0.50	-1.0
4,875,514	-		DZA65_RS22540	0.50	+0.9
4,875,514	-		DZA65_RS22540	0.50	+0.6
4,875,514	-		DZA65_RS22540	0.50	-0.7
4,875,568	+		DZA65_RS22540	0.55	+0.1
4,875,568	+		DZA65_RS22540	0.55	-0.7
4,875,569	-		DZA65_RS22540	0.55	-0.1
4,875,569	-		DZA65_RS22540	0.55	-0.8
4,875,569	-		DZA65_RS22540	0.55	+0.7
4,875,569	-		DZA65_RS22540	0.55	+0.7
4,875,569	-		DZA65_RS22540	0.55	-1.1
4,875,648	+		DZA65_RS22540	0.63	-0.4
4,875,649	-		DZA65_RS22540	0.63	+1.6
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