Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21630

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,676,224	+				+1.2
4,676,224	+				+1.3
4,676,224	+				-2.5
4,676,224	+				-2.1
4,676,224	+				-1.1
4,676,224	+				-1.3
4,676,224	+				-0.5
4,676,224	+				+0.5
4,676,224	+				-0.5
4,676,224	+				-1.5
4,676,224	+				-0.1
4,676,224	+				-1.4
4,676,224	+				+0.2
4,676,224	+				+0.2
4,676,224	+				-1.8
4,676,224	+				-0.2
4,676,224	+				+0.3
4,676,224	+				-1.1
4,676,224	+				+3.5
4,676,224	+				+0.5
4,676,224	+				-0.1
4,676,224	+				+0.8
4,676,224	+				+0.9
4,676,224	+				-1.3
4,676,225	-				-0.7
4,676,225	-				+0.1
4,676,225	-				-0.7
4,676,225	-				-0.1
4,676,225	-				+1.2
4,676,225	-				-1.9
4,676,225	-				+0.7
4,676,225	-				+1.1
4,676,225	-				+0.2
4,676,225	-				+0.9
4,676,225	-				-0.9
4,676,225	-				-1.4
4,676,225	-				-2.1
4,676,225	-				-0.2
4,676,225	-				-0.5
4,676,225	-				-0.3
4,676,225	-				-1.0
4,676,225	-				-0.5
4,676,225	-				-0.2
4,676,225	-				+0.3
4,676,225	-				+1.0
4,676,225	-				-0.3
4,676,273	-				+0.6
4,676,293	+				-3.0
4,676,293	+				-0.7
4,676,293	+				-0.1
4,676,293	+				-1.7
4,676,293	+				+0.1
4,676,293	+				-1.1
4,676,293	+				+0.7
4,676,293	+				-2.7
4,676,293	+				-0.1
4,676,293	+				-0.7
4,676,293	+				-0.8
4,676,293	+				+2.1
4,676,293	+				+2.1
4,676,293	+				+0.1
4,676,293	+				-0.5
4,676,293	+				-0.3
4,676,294	-				+0.1
4,676,294	-				+0.9
4,676,294	-				-0.7
4,676,294	-				+0.3
4,676,294	-				+0.2
4,676,294	-				-1.2
4,676,294	-				+0.6
4,676,294	-				-0.1
4,676,294	-				+1.8
4,676,294	-				-1.8
4,676,294	-				-1.1
4,676,294	-				+1.4
4,676,294	-				+0.7
4,676,294	-				-0.1
4,676,294	-				-0.4
4,676,294	-				+1.5
4,676,294	-				-0.2
4,676,315	-				-0.1
4,676,338	-				+0.8
4,676,376	+				+0.3
4,676,376	+				-0.7
4,676,376	+				-0.9
4,676,376	+				+0.3
4,676,388	+				+3.7
4,676,388	+				-0.8
4,676,389	-				-0.2
4,676,419	+				-0.1
4,676,419	+				-0.0
4,676,419	+				+0.9
4,676,419	+				+0.9
4,676,419	+				+0.8
4,676,419	+				-1.0
4,676,419	+				-0.1
4,676,419	+				-1.9
4,676,420	-				-0.2
4,676,420	-				-0.1
4,676,420	-				-0.1
4,676,420	-				-1.1
4,676,420	-				+0.3
4,676,420	-				+0.1
4,676,420	-				+0.2
4,676,420	-				-0.5
4,676,420	-				+0.7
4,676,422	+				-0.5
4,676,429	-				-1.1
4,676,429	-				+1.3
4,676,429	-				+0.2
4,676,438	+				-1.0
4,676,439	-				+1.6
4,676,440	-				+0.6
4,676,508	+		DZA65_RS21625	0.14	+1.9
4,676,575	-		DZA65_RS21625	0.23	+0.2
4,676,617	+		DZA65_RS21625	0.28	-0.2
4,676,618	-		DZA65_RS21625	0.28	+0.9
4,676,722	+		DZA65_RS21625	0.42	-0.1
4,676,722	+		DZA65_RS21625	0.42	+0.2
4,676,731	+		DZA65_RS21625	0.43	+0.9
4,676,731	+		DZA65_RS21625	0.43	+0.6
4,676,731	+		DZA65_RS21625	0.43	+0.5
4,676,731	+		DZA65_RS21625	0.43	+1.5
4,676,731	+		DZA65_RS21625	0.43	+1.1
4,676,732	-		DZA65_RS21625	0.43	+0.3
4,676,732	-		DZA65_RS21625	0.43	-0.5
4,676,732	-		DZA65_RS21625	0.43	+0.3
4,676,732	-		DZA65_RS21625	0.43	-1.5
4,676,732	-		DZA65_RS21625	0.43	+0.2
4,676,799	+		DZA65_RS21625	0.52	-0.5
4,676,799	+		DZA65_RS21625	0.52	+0.8
4,676,800	-		DZA65_RS21625	0.52	-0.1
4,676,800	-		DZA65_RS21625	0.52	+0.1
4,676,814	+		DZA65_RS21625	0.53	-0.4
4,676,814	+		DZA65_RS21625	0.53	+1.7
4,676,814	+		DZA65_RS21625	0.53	-2.0
4,676,814	+		DZA65_RS21625	0.53	-1.7
4,676,814	+		DZA65_RS21625	0.53	+0.1
4,676,814	+		DZA65_RS21625	0.53	-0.0
4,676,814	+		DZA65_RS21625	0.53	+0.9
4,676,815	-		DZA65_RS21625	0.54	+1.6
4,676,815	-		DZA65_RS21625	0.54	-1.4
4,676,815	-		DZA65_RS21625	0.54	-0.2
4,676,815	-		DZA65_RS21625	0.54	+1.2
4,676,815	-		DZA65_RS21625	0.54	-0.8
4,676,815	-		DZA65_RS21625	0.54	-1.1
4,676,950	+		DZA65_RS21625	0.71	-0.1
4,676,950	+		DZA65_RS21625	0.71	-0.7
4,676,961	+		DZA65_RS21625	0.72	-0.9
4,676,962	-		DZA65_RS21625	0.73	-0.4
4,676,997	+		DZA65_RS21625	0.77	+1.0
4,676,998	-		DZA65_RS21625	0.77	-0.8
4,677,046	+		DZA65_RS21625	0.83	-0.1
4,677,046	+		DZA65_RS21625	0.83	-0.5
4,677,046	+		DZA65_RS21625	0.83	-0.1
4,677,046	+		DZA65_RS21625	0.83	-1.1
4,677,046	+		DZA65_RS21625	0.83	+0.2
4,677,046	+		DZA65_RS21625	0.83	+0.2
4,677,047	-		DZA65_RS21625	0.84	+0.3
4,677,047	-		DZA65_RS21625	0.84	+0.7
4,677,047	-		DZA65_RS21625	0.84	-1.1
4,677,047	-		DZA65_RS21625	0.84	+0.5
4,677,047	-		DZA65_RS21625	0.84	-1.4
4,677,047	-		DZA65_RS21625	0.84	+1.4
4,677,047	-		DZA65_RS21625	0.84	+0.4
4,677,047	-		DZA65_RS21625	0.84	-0.4
4,677,047	-		DZA65_RS21625	0.84	+0.5
4,677,102	+				-0.3
4,677,253	+				-0.7
4,677,253	+				-0.4
4,677,254	-				+0.9
4,677,254	-				+0.1
4,677,299	+		DZA65_RS21630	0.18	-0.8
4,677,299	+		DZA65_RS21630	0.18	-0.7
4,677,299	+		DZA65_RS21630	0.18	-0.7
4,677,300	-		DZA65_RS21630	0.19	+0.6
4,677,300	-		DZA65_RS21630	0.19	-0.7
4,677,300	-		DZA65_RS21630	0.19	+0.2
4,677,407	-		DZA65_RS21630	0.42	+1.2
4,677,490	+		DZA65_RS21630	0.60	-0.3
4,677,490	+		DZA65_RS21630	0.60	-0.1
4,677,491	-		DZA65_RS21630	0.60	-0.9
4,677,491	-		DZA65_RS21630	0.60	+1.7
4,677,491	-		DZA65_RS21630	0.60	-1.1
4,677,491	-		DZA65_RS21630	0.60	+1.1
4,677,491	-		DZA65_RS21630	0.60	-0.2
4,677,526	+		DZA65_RS21630	0.67	+0.4
4,677,623	+		DZA65_RS21630	0.88	+1.8
4,677,626	+		DZA65_RS21630	0.89	-1.5
4,677,626	+		DZA65_RS21630	0.89	-0.4
4,677,626	+		DZA65_RS21630	0.89	+0.5
4,677,626	+		DZA65_RS21630	0.89	+1.9
4,677,626	+		DZA65_RS21630	0.89	-0.6
4,677,626	+		DZA65_RS21630	0.89	-1.3
4,677,626	+		DZA65_RS21630	0.89	-0.2
4,677,626	+		DZA65_RS21630	0.89	+0.4
4,677,626	+		DZA65_RS21630	0.89	-0.1
4,677,627	-		DZA65_RS21630	0.89	+0.8
4,677,627	-		DZA65_RS21630	0.89	+0.5
4,677,627	-		DZA65_RS21630	0.89	+1.6
4,677,658	+				-0.1
4,677,659	-				+1.9
4,677,659	-				-0.3
4,677,668	+				+0.6
4,677,668	+				-0.7
4,677,680	+				-0.4
4,677,680	+				-0.9
4,677,681	-				-1.0
4,677,681	-				-1.9
4,677,681	-				+0.1
4,677,681	-				+0.7
4,677,681	-				-0.6
4,677,691	-				-0.2
4,677,712	-				+0.1
4,677,712	-				-0.7
4,677,712	-				+0.5
4,677,713	+				-1.5
4,677,750	-				+1.5
4,677,798	+				-1.1
4,677,810	+				-0.4
4,677,810	+				-0.2
4,677,811	-				-0.1
4,677,811	-				+0.9
4,677,811	-				+1.9
4,677,854	+				-0.1
4,677,855	-				+0.9
4,677,857	+				-0.1
4,677,857	+				+0.6
4,677,858	-				+0.9
4,677,858	-				+0.8
4,677,858	-				-0.0
4,677,918	-		DZA65_RS21635	0.19	-0.9
4,677,951	+		DZA65_RS21635	0.32	-0.8
4,677,951	+		DZA65_RS21635	0.32	-1.7
4,677,951	+		DZA65_RS21635	0.32	-0.5
4,677,951	+		DZA65_RS21635	0.32	-0.5
4,677,951	+		DZA65_RS21635	0.32	-1.9
4,677,951	+		DZA65_RS21635	0.32	-1.4
4,677,952	-		DZA65_RS21635	0.32	-0.8
4,677,955	-		DZA65_RS21635	0.33	+0.1
4,677,978	+		DZA65_RS21635	0.42	+0.2
4,677,978	+		DZA65_RS21635	0.42	-0.2
4,677,978	+		DZA65_RS21635	0.42	+0.7
4,677,978	+		DZA65_RS21635	0.42	-2.4
4,677,979	-		DZA65_RS21635	0.43	-0.8
4,678,018	-		DZA65_RS21635	0.57	-2.7
4,678,051	+		DZA65_RS21635	0.70	-2.2
4,678,051	+		DZA65_RS21635	0.70	+0.9
4,678,052	-		DZA65_RS21635	0.70	-1.1
4,678,052	-		DZA65_RS21635	0.70	+1.5
4,678,113	+				-0.9
4,678,114	-				-0.1
4,678,180	+				-1.9
4,678,181	-				-1.4
4,678,181	-				-1.1
4,678,221	-				+0.1
4,678,280	+		DZA65_RS21640	0.11	-2.8
4,678,280	+		DZA65_RS21640	0.11	+1.2
4,678,281	-		DZA65_RS21640	0.11	-1.7
4,678,281	-		DZA65_RS21640	0.11	-2.4
4,678,281	-		DZA65_RS21640	0.11	+0.5
4,678,300	+		DZA65_RS21640	0.13	+0.4
4,678,300	+		DZA65_RS21640	0.13	-0.3
4,678,300	+		DZA65_RS21640	0.13	-0.7
4,678,300	+		DZA65_RS21640	0.13	-1.1
4,678,300	+		DZA65_RS21640	0.13	+1.5
4,678,301	-		DZA65_RS21640	0.13	+0.2
4,678,301	-		DZA65_RS21640	0.13	+0.2
4,678,301	-		DZA65_RS21640	0.13	-0.7
4,678,304	+		DZA65_RS21640	0.13	-1.1
4,678,304	+		DZA65_RS21640	0.13	-0.5
4,678,304	+		DZA65_RS21640	0.13	-0.2
4,678,304	+		DZA65_RS21640	0.13	+1.4
4,678,304	+		DZA65_RS21640	0.13	+0.8
4,678,305	-		DZA65_RS21640	0.13	+0.9
4,678,305	-		DZA65_RS21640	0.13	+0.1
4,678,305	-		DZA65_RS21640	0.13	+1.3
4,678,404	+		DZA65_RS21640	0.24	-0.9
4,678,427	+		DZA65_RS21640	0.26	-1.3
4,678,427	+		DZA65_RS21640	0.26	+0.7
4,678,428	-		DZA65_RS21640	0.26	-1.7
4,678,428	-		DZA65_RS21640	0.26	-1.2
4,678,428	-		DZA65_RS21640	0.26	-0.9
4,678,428	-		DZA65_RS21640	0.26	+1.5
4,678,463	-		DZA65_RS21640	0.30	+1.1
4,678,509	+		DZA65_RS21640	0.34	-0.0
4,678,509	+		DZA65_RS21640	0.34	+0.2
4,678,509	+		DZA65_RS21640	0.34	+2.7
4,678,509	+		DZA65_RS21640	0.34	-0.3
4,678,509	+		DZA65_RS21640	0.34	+0.1
4,678,509	+		DZA65_RS21640	0.34	+0.7
4,678,509	+		DZA65_RS21640	0.34	-0.3
4,678,509	+		DZA65_RS21640	0.34	+0.2
4,678,509	+		DZA65_RS21640	0.34	+0.7
4,678,509	+		DZA65_RS21640	0.34	+0.5
4,678,510	-		DZA65_RS21640	0.35	-0.5
4,678,510	-		DZA65_RS21640	0.35	-1.7
4,678,510	-		DZA65_RS21640	0.35	-0.4
4,678,510	-		DZA65_RS21640	0.35	+0.3
4,678,510	-		DZA65_RS21640	0.35	+2.2
4,678,510	-		DZA65_RS21640	0.35	-0.3
4,678,524	-		DZA65_RS21640	0.36	-1.3
4,678,535	+		DZA65_RS21640	0.37	+0.6
4,678,535	+		DZA65_RS21640	0.37	+1.1
4,678,535	+		DZA65_RS21640	0.37	-2.1
4,678,536	-		DZA65_RS21640	0.37	+1.2
4,678,536	-		DZA65_RS21640	0.37	+0.2
4,678,536	-		DZA65_RS21640	0.37	+1.1
4,678,536	-		DZA65_RS21640	0.37	-0.7
4,678,536	-		DZA65_RS21640	0.37	+0.4
4,678,573	+		DZA65_RS21640	0.41	+0.1
4,678,573	+		DZA65_RS21640	0.41	-0.1