Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21470

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,643,395	+		DZA65_RS21465	0.62	+0.9
4,643,395	+		DZA65_RS21465	0.62	-1.4
4,643,395	+		DZA65_RS21465	0.62	+0.6
4,643,395	+		DZA65_RS21465	0.62	+1.2
4,643,395	+		DZA65_RS21465	0.62	-0.3
4,643,396	-		DZA65_RS21465	0.62	-0.9
4,643,396	-		DZA65_RS21465	0.62	+0.8
4,643,396	-		DZA65_RS21465	0.62	-0.0
4,643,460	-		DZA65_RS21465	0.64	-0.5
4,643,512	-		DZA65_RS21465	0.67	+0.5
4,643,618	+		DZA65_RS21465	0.71	+0.5
4,643,618	+		DZA65_RS21465	0.71	+0.2
4,643,618	+		DZA65_RS21465	0.71	+0.0
4,643,618	+		DZA65_RS21465	0.71	+0.1
4,643,690	+		DZA65_RS21465	0.74	-1.7
4,643,737	-		DZA65_RS21465	0.76	+0.5
4,643,745	+		DZA65_RS21465	0.76	-1.5
4,643,745	+		DZA65_RS21465	0.76	+0.7
4,643,745	+		DZA65_RS21465	0.76	-0.9
4,643,975	-		DZA65_RS21465	0.86	+0.9
4,644,030	+		DZA65_RS21465	0.88	+0.5
4,644,030	+		DZA65_RS21465	0.88	-0.4
4,644,031	-		DZA65_RS21465	0.88	+0.0
4,644,103	+				+1.6
4,644,103	+				-0.2
4,644,104	-				+0.4
4,644,184	+				+0.6
4,644,212	+				+0.7
4,644,226	-				+1.4
4,644,243	-				+1.8
4,644,243	-				+0.3
4,644,264	+				+0.9
4,644,264	+				+0.8
4,644,265	-				+0.1
4,644,265	-				+0.8
4,644,316	+				+0.9
4,644,331	+				-1.1
4,644,331	+				+2.2
4,644,332	-				+0.9
4,644,332	-				-0.6
4,644,332	-				+0.1
4,644,332	-				+1.7
4,644,332	-				+1.2
4,644,332	-				+0.9
4,644,338	+				-0.1
4,644,338	+				-0.7
4,644,338	+				-1.4
4,644,338	+				-0.1
4,644,338	+				-0.4
4,644,338	+				-1.3
4,644,338	+				-2.1
4,644,339	-				-1.9
4,644,339	-				+0.3
4,644,339	-				+0.9
4,644,339	-				+0.1
4,644,339	-				-0.3
4,644,339	-				-0.5
4,644,407	+				-0.5
4,644,407	+				-1.4
4,644,407	+				-0.6
4,644,407	+				-0.1
4,644,407	+				+0.6
4,644,407	+				+1.4
4,644,407	+				-2.4
4,644,408	-				-2.4
4,644,408	-				-1.7
4,644,408	-				+0.9
4,644,415	-				-0.9
4,644,428	+				+0.9
4,644,563	+		DZA65_RS21470	0.20	-0.7
4,644,563	+		DZA65_RS21470	0.20	-1.9
4,644,563	+		DZA65_RS21470	0.20	-1.4
4,644,563	+		DZA65_RS21470	0.20	-1.7
4,644,564	-		DZA65_RS21470	0.20	-0.3
4,644,564	-		DZA65_RS21470	0.20	-0.5
4,644,664	+		DZA65_RS21470	0.29	+0.7
4,644,664	+		DZA65_RS21470	0.29	-0.1
4,644,664	+		DZA65_RS21470	0.29	-0.9
4,644,664	+		DZA65_RS21470	0.29	-1.8
4,644,664	+		DZA65_RS21470	0.29	-3.3
4,644,664	+		DZA65_RS21470	0.29	+0.3
4,644,664	+		DZA65_RS21470	0.29	-1.6
4,644,664	+		DZA65_RS21470	0.29	-1.3
4,644,664	+		DZA65_RS21470	0.29	-0.8
4,644,664	+		DZA65_RS21470	0.29	-0.4
4,644,664	+		DZA65_RS21470	0.29	-0.9
4,644,664	+		DZA65_RS21470	0.29	-0.0
4,644,664	+		DZA65_RS21470	0.29	-0.3
4,644,664	+		DZA65_RS21470	0.29	-0.9
4,644,664	+		DZA65_RS21470	0.29	+0.4
4,644,664	+		DZA65_RS21470	0.29	-1.0
4,644,664	+				-1.7
4,644,664	+		DZA65_RS21470	0.29	-1.9
4,644,665	-		DZA65_RS21470	0.29	-1.0
4,644,665	-		DZA65_RS21470	0.29	-1.1
4,644,665	-		DZA65_RS21470	0.29	-1.1
4,644,665	-		DZA65_RS21470	0.29	+0.2
4,644,665	-		DZA65_RS21470	0.29	-2.0
4,644,665	-		DZA65_RS21470	0.29	-0.3
4,644,665	-		DZA65_RS21470	0.29	-0.7
4,644,665	-		DZA65_RS21470	0.29	-0.1
4,644,665	-		DZA65_RS21470	0.29	-0.0
4,644,665	-		DZA65_RS21470	0.29	+0.4
4,644,665	-		DZA65_RS21470	0.29	+0.0
4,644,665	-		DZA65_RS21470	0.29	-2.6
4,644,665	-		DZA65_RS21470	0.29	+0.0
4,644,665	-		DZA65_RS21470	0.29	+0.9
4,644,665	-		DZA65_RS21470	0.29	-1.4
4,644,665	-		DZA65_RS21470	0.29	-0.8
4,644,665	-		DZA65_RS21470	0.29	-1.1
4,644,665	-		DZA65_RS21470	0.29	+1.3
4,644,665	-		DZA65_RS21470	0.29	-1.6
4,644,665	-		DZA65_RS21470	0.29	-0.5
4,644,665	-		DZA65_RS21470	0.29	-2.8
4,644,665	-		DZA65_RS21470	0.29	-1.9
4,644,665	-		DZA65_RS21470	0.29	-0.1
4,644,665	-		DZA65_RS21470	0.29	-1.6
4,644,665	-		DZA65_RS21470	0.29	-0.1
4,644,665	-		DZA65_RS21470	0.29	-2.3
4,644,665	-		DZA65_RS21470	0.29	+1.4
4,644,665	-		DZA65_RS21470	0.29	-1.0
4,644,697	+		DZA65_RS21470	0.32	-0.8
4,644,697	+		DZA65_RS21470	0.32	-1.2
4,644,698	-		DZA65_RS21470	0.32	-0.3
4,644,698	-		DZA65_RS21470	0.32	-1.9
4,644,737	+		DZA65_RS21470	0.35	-0.7
4,644,738	-		DZA65_RS21470	0.35	-0.6
4,644,775	+		DZA65_RS21470	0.38	-1.2
4,644,775	+		DZA65_RS21470	0.38	-0.9
4,644,775	+		DZA65_RS21470	0.38	-1.6
4,644,775	+		DZA65_RS21470	0.38	-4.1
4,644,775	+		DZA65_RS21470	0.38	-2.0
4,644,775	+		DZA65_RS21470	0.38	-1.7
4,644,775	+		DZA65_RS21470	0.38	+0.4
4,644,776	-		DZA65_RS21470	0.38	-1.7
4,644,776	-		DZA65_RS21470	0.38	-1.1
4,644,776	-		DZA65_RS21470	0.38	-1.2
4,644,776	-		DZA65_RS21470	0.38	-1.4
4,644,776	-		DZA65_RS21470	0.38	-2.3
4,644,895	+		DZA65_RS21470	0.49	-1.5
4,644,895	+		DZA65_RS21470	0.49	+2.9
4,644,895	+		DZA65_RS21470	0.49	+1.9
4,644,896	-		DZA65_RS21470	0.49	-1.3
4,644,896	-		DZA65_RS21470	0.49	+0.2
4,644,912	+		DZA65_RS21470	0.50	-1.4
4,644,912	+		DZA65_RS21470	0.50	-1.1
4,644,912	+		DZA65_RS21470	0.50	-0.7
4,644,912	+		DZA65_RS21470	0.50	-0.3
4,644,912	+		DZA65_RS21470	0.50	+0.2
4,644,912	+		DZA65_RS21470	0.50	-1.7
4,644,913	-		DZA65_RS21470	0.50	-1.8
4,644,913	-		DZA65_RS21470	0.50	-2.6
4,644,913	-		DZA65_RS21470	0.50	-2.7
4,644,913	-		DZA65_RS21470	0.50	-3.3
4,645,068	+		DZA65_RS21470	0.64	-0.1
4,645,069	-		DZA65_RS21470	0.64	-0.7
4,645,177	+		DZA65_RS21470	0.73	-1.9
4,645,177	+		DZA65_RS21470	0.73	-0.7
4,645,178	-		DZA65_RS21470	0.73	-1.4
4,645,190	-		DZA65_RS21470	0.74	-0.8
4,645,238	+		DZA65_RS21470	0.78	-0.6
4,645,239	-		DZA65_RS21470	0.78	-1.1
4,645,354	+		DZA65_RS21470	0.88	-0.8
4,645,354	+		DZA65_RS21470	0.88	-1.4
4,645,355	-		DZA65_RS21470	0.88	-1.7
4,645,355	-		DZA65_RS21470	0.88	-0.8
4,645,355	-		DZA65_RS21470	0.88	-2.9
4,645,355	-		DZA65_RS21470	0.88	-2.7
4,645,376	+				-1.4
4,645,376	+				-0.8
4,645,377	-				-1.1
4,645,393	+				+3.5
4,645,393	+				-0.9
4,645,393	+				-0.7
4,645,393	+				-0.4
4,645,393	+				+0.5
4,645,394	-				-1.7
4,645,394	-				-1.4
4,645,394	-				-0.9
4,645,394	-				-0.8
4,645,394	-				-0.5
4,645,394	-				-0.3
4,645,394	-				-0.4
4,645,449	+				-0.4
4,645,469	+				-0.8
4,645,470	-				-1.9
4,645,470	-				-0.2
4,645,472	+				-0.5
4,645,481	+				+0.4
4,645,521	+				+1.1
4,645,521	+				-2.6
4,645,521	+				-1.4
4,645,521	+				-1.2
4,645,521	+				+1.8
4,645,521	+				-0.4
4,645,522	-				+0.3
4,645,522	-				+2.5
4,645,522	-				-0.7
4,645,538	-				+0.3
4,645,593	-				-1.4
4,645,593	-				-0.1
4,645,608	-				-1.7
4,645,609	+				+0.6
4,645,612	+				+1.4
4,645,612	+				+0.1
4,645,612	+				+0.9
4,645,612	+				+0.2
4,645,612	+				+1.0
4,645,612	+				-0.7
4,645,613	-				+2.3
4,645,613	-				+0.0
4,645,625	+				+1.4
4,645,625	+				-1.0
4,645,653	+				-2.8
4,645,669	+				-0.3
4,645,701	+				+0.7
4,645,764	-				-0.1
4,645,955	+		DZA65_RS21475	0.86	-0.8
4,645,955	+		DZA65_RS21475	0.86	-0.9
4,645,956	-		DZA65_RS21475	0.87	+0.2
4,645,956	-		DZA65_RS21475	0.87	+0.9
4,645,956	-		DZA65_RS21475	0.87	-1.1
4,645,982	+				-0.2
4,645,992	+				+2.9
4,645,995	+				+0.9
4,645,995	+				+3.1
4,645,995	+				-0.3
4,645,995	+				-0.1
4,645,995	+				-0.4
4,645,995	+				+0.9
4,645,995	+				+0.2
4,645,995	+				-1.6
4,645,995	+				+2.1
4,645,995	+				-0.7
4,645,995	+				-2.6
4,645,995	+				-0.1
4,645,995	+				+1.5
4,645,995	+				+1.1
4,645,996	-				+0.1
4,645,996	-				-1.6
4,645,996	-				+0.2
4,645,996	-				+0.0
4,645,996	-				+0.0
4,645,996	-				-0.3
4,645,999	+				+0.1
4,645,999	+				-1.8
4,645,999	+				+0.5
4,645,999	+				-2.6
4,646,000	-				+0.9
4,646,007	+				+0.3