Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21420

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,631,046	-		DZA65_RS21410	0.84	-0.6
4,631,132	-		DZA65_RS21410	0.89	-0.1
4,631,582	+				-0.5
4,631,582	+				-1.0
4,631,582	+				-0.1
4,631,582	+				-0.2
4,631,584	+				-2.3
4,631,584	+				-1.0
4,631,584	+				+2.2
4,631,584	+				-0.6
4,631,641	+				+1.5
4,631,641	+				+1.0
4,631,642	-				+0.5
4,631,642	-				-0.6
4,631,645	+				-1.1
4,631,645	+				-1.1
4,631,646	-				+0.0
4,631,693	+				-0.1
4,631,694	-				-2.4
4,631,733	+		DZA65_RS21420	0.10	-2.8
4,631,747	+		DZA65_RS21420	0.12	+0.4
4,631,748	-		DZA65_RS21420	0.12	-0.9
4,631,748	-		DZA65_RS21420	0.12	-1.8
4,631,757	+		DZA65_RS21420	0.13	-3.2
4,631,757	+		DZA65_RS21420	0.13	-4.1
4,631,757	+		DZA65_RS21420	0.13	-2.8
4,631,757	+		DZA65_RS21420	0.13	-0.1
4,631,757	+		DZA65_RS21420	0.13	+0.5
4,631,757	+		DZA65_RS21420	0.13	+1.1
4,631,758	-		DZA65_RS21420	0.13	-1.3
4,631,758	-		DZA65_RS21420	0.13	+0.9
4,631,758	-		DZA65_RS21420	0.13	-0.9
4,631,758	-		DZA65_RS21420	0.13	-2.1
4,631,820	+		DZA65_RS21420	0.20	-1.9
4,631,820	+		DZA65_RS21420	0.20	-0.4
4,631,820	+		DZA65_RS21420	0.20	-1.5
4,631,820	+		DZA65_RS21420	0.20	-0.6
4,631,821	-				+0.9
4,631,821	-		DZA65_RS21420	0.20	-1.7
4,631,821	-		DZA65_RS21420	0.20	-2.4
4,631,821	-		DZA65_RS21420	0.20	+0.3
4,631,821	-		DZA65_RS21420	0.20	-1.2
4,631,860	+		DZA65_RS21420	0.25	-1.3
4,631,860	+		DZA65_RS21420	0.25	-1.1
4,631,861	-		DZA65_RS21420	0.25	-0.9
4,631,861	-		DZA65_RS21420	0.25	+0.9
4,631,898	+		DZA65_RS21420	0.29	-0.7
4,631,898	+		DZA65_RS21420	0.29	-1.1
4,631,898	+		DZA65_RS21420	0.29	-0.1
4,631,898	+		DZA65_RS21420	0.29	-1.1
4,631,898	+		DZA65_RS21420	0.29	-0.7
4,631,898	+		DZA65_RS21420	0.29	-1.1
4,631,899	-		DZA65_RS21420	0.29	-2.3
4,631,899	-		DZA65_RS21420	0.29	-1.3
4,631,899	-		DZA65_RS21420	0.29	-1.5
4,631,899	-		DZA65_RS21420	0.29	-1.7
4,631,899	-		DZA65_RS21420	0.29	-1.7
4,631,899	-		DZA65_RS21420	0.29	+1.1
4,631,899	-		DZA65_RS21420	0.29	+0.4
4,631,916	+		DZA65_RS21420	0.31	-2.1
4,631,917	-		DZA65_RS21420	0.31	+0.1
4,631,917	-		DZA65_RS21420	0.31	-0.1
4,631,917	-		DZA65_RS21420	0.31	-0.1
4,631,939	-		DZA65_RS21420	0.34	-3.2
4,631,977	+		DZA65_RS21420	0.38	-0.1
4,632,081	+		DZA65_RS21420	0.50	-1.7
4,632,081	+		DZA65_RS21420	0.50	-2.7
4,632,081	+		DZA65_RS21420	0.50	+1.5
4,632,081	+		DZA65_RS21420	0.50	-2.3
4,632,082	-				-0.1
4,632,082	-		DZA65_RS21420	0.50	-0.9
4,632,082	-		DZA65_RS21420	0.50	-1.2
4,632,082	-		DZA65_RS21420	0.50	+0.1
4,632,084	-		DZA65_RS21420	0.50	-0.3
4,632,084	-		DZA65_RS21420	0.50	-2.1
4,632,099	+		DZA65_RS21420	0.52	-1.4
4,632,100	-		DZA65_RS21420	0.52	-2.1
4,632,100	-		DZA65_RS21420	0.52	-1.9
4,632,158	-		DZA65_RS21420	0.59	+1.2
4,632,166	+		DZA65_RS21420	0.60	-1.5
4,632,166	+		DZA65_RS21420	0.60	-1.9
4,632,167	-		DZA65_RS21420	0.60	-1.3
4,632,167	-		DZA65_RS21420	0.60	-1.7
4,632,189	+		DZA65_RS21420	0.62	-2.1
4,632,189	+		DZA65_RS21420	0.62	+1.2
4,632,189	+		DZA65_RS21420	0.62	+0.1
4,632,190	-		DZA65_RS21420	0.63	-0.7
4,632,231	+		DZA65_RS21420	0.67	-2.4
4,632,231	+		DZA65_RS21420	0.67	-2.1
4,632,232	-		DZA65_RS21420	0.67	-2.1
4,632,232	-		DZA65_RS21420	0.67	-2.4
4,632,232	-		DZA65_RS21420	0.67	-0.3
4,632,232	-		DZA65_RS21420	0.67	-2.7
4,632,234	+		DZA65_RS21420	0.68	-0.7
4,632,235	-		DZA65_RS21420	0.68	-0.4
4,632,235	-		DZA65_RS21420	0.68	-1.9
4,632,235	-		DZA65_RS21420	0.68	-0.3
4,632,247	+		DZA65_RS21420	0.69	-4.5
4,632,247	+		DZA65_RS21420	0.69	-2.3
4,632,247	+		DZA65_RS21420	0.69	+0.9
4,632,248	-		DZA65_RS21420	0.69	-3.4
4,632,248	-		DZA65_RS21420	0.69	-1.6
4,632,248	-		DZA65_RS21420	0.69	-1.1
4,632,248	-		DZA65_RS21420	0.69	-2.4
4,632,289	-		DZA65_RS21420	0.74	+0.9
4,632,289	-		DZA65_RS21420	0.74	+0.9
4,632,289	-		DZA65_RS21420	0.74	-1.3
4,632,309	+		DZA65_RS21420	0.76	-1.3
4,632,309	+		DZA65_RS21420	0.76	-2.1
4,632,310	-		DZA65_RS21420	0.76	-1.3
4,632,359	+		DZA65_RS21420	0.82	-1.9
4,632,359	+		DZA65_RS21420	0.82	-0.7
4,632,359	+		DZA65_RS21420	0.82	-1.4
4,632,359	+		DZA65_RS21420	0.82	-2.2
4,632,360	-		DZA65_RS21420	0.82	-2.8
4,632,360	-		DZA65_RS21420	0.82	-3.0
4,632,363	+		DZA65_RS21420	0.82	-1.8
4,632,363	+		DZA65_RS21420	0.82	-0.7
4,632,363	+		DZA65_RS21420	0.82	-0.1
4,632,363	+		DZA65_RS21420	0.82	-2.1
4,632,363	+		DZA65_RS21420	0.82	-0.9
4,632,363	+		DZA65_RS21420	0.82	+1.1
4,632,364	-		DZA65_RS21420	0.82	-2.0
4,632,364	-		DZA65_RS21420	0.82	-0.9
4,632,364	-		DZA65_RS21420	0.82	+2.8
4,632,364	-		DZA65_RS21420	0.82	-1.4
4,632,364	-		DZA65_RS21420	0.82	-1.9
4,632,365	+		DZA65_RS21420	0.83	-0.9
4,632,365	+		DZA65_RS21420	0.83	-0.3
4,632,365	+		DZA65_RS21420	0.83	-2.1
4,632,365	+		DZA65_RS21420	0.83	-0.7
4,632,365	+		DZA65_RS21420	0.83	-1.1
4,632,365	+		DZA65_RS21420	0.83	-1.1
4,632,365	+		DZA65_RS21420	0.83	-1.1
4,632,366	-		DZA65_RS21420	0.83	-1.3
4,632,366	-		DZA65_RS21420	0.83	-3.5
4,632,366	-		DZA65_RS21420	0.83	-1.9
4,632,366	-		DZA65_RS21420	0.83	-0.3
4,632,366	-		DZA65_RS21420	0.83	+0.0
4,632,366	-		DZA65_RS21420	0.83	-1.6
4,632,370	+		DZA65_RS21420	0.83	-2.4
4,632,370	+		DZA65_RS21420	0.83	-2.4
4,632,370	+		DZA65_RS21420	0.83	-2.1
4,632,370	+		DZA65_RS21420	0.83	-4.2
4,632,370	+		DZA65_RS21420	0.83	-1.9
4,632,370	+		DZA65_RS21420	0.83	-0.8
4,632,371	-		DZA65_RS21420	0.83	-0.7
4,632,371	-		DZA65_RS21420	0.83	+0.8
4,632,371	-		DZA65_RS21420	0.83	-1.4
4,632,371	-		DZA65_RS21420	0.83	-1.7
4,632,401	+		DZA65_RS21420	0.87	-1.3
4,632,402	-		DZA65_RS21420	0.87	-1.7
4,632,402	-				-0.1
4,632,469	+				+0.5
4,632,469	+				-0.1
4,632,469	+				-0.9
4,632,469	+				-0.4
4,632,469	+				-1.1
4,632,469	+				-0.9
4,632,469	+				-0.7
4,632,469	+				-1.9
4,632,469	+				+0.2
4,632,470	-				+0.9
4,632,470	-				-2.3
4,632,472	-				-0.5
4,632,472	-				+0.6
4,632,472	-				-1.1
4,632,472	-				-2.7
4,632,486	+				+0.5
4,632,486	+				-0.1
4,632,487	-				-1.6
4,632,489	+				-1.9
4,632,516	+				-1.0
4,632,516	+				-0.7
4,632,516	+				+0.0
4,632,516	+				-0.2
4,632,516	+				-2.0
4,632,516	+				-1.7
4,632,517	-				+0.9
4,632,517	-				+0.0
4,632,517	-				+0.9
4,632,517	-				-0.7
4,632,517	-				-1.6
4,632,517	-				-0.6
4,632,517	-				-0.3
4,632,517	-				-0.2
4,632,517	-				-1.1
4,632,518	+				-0.7
4,632,518	+				-0.4
4,632,518	+				+2.0
4,632,518	+				-1.9
4,632,518	+				-1.1
4,632,518	+				-2.8
4,632,518	+				-0.7
4,632,518	+				-1.4
4,632,518	+				+0.4
4,632,519	-				+0.7
4,632,519	-				+0.0
4,632,519	-				+1.1
4,632,529	-				-1.5
4,632,529	-				-0.1
4,632,556	+				-0.8
4,632,556	+				+2.1
4,632,557	-				-0.6
4,632,557	-				+0.1
4,632,557	-				-0.7
4,632,610	+				+1.9
4,632,610	+				+0.5
4,632,611	-				+1.1
4,632,611	-				-1.1
4,632,613	+				-0.1
4,632,613	+				+0.3
4,632,613	+				+0.1
4,632,613	+				-0.5
4,632,613	+				-0.4
4,632,613	+				-1.3
4,632,613	+				-0.9
4,632,613	+				+0.4
4,632,613	+				+0.2
4,632,613	+				-2.0
4,632,613	+				-0.8
4,632,613	+				-0.1
4,632,613	+				-1.6
4,632,614	-				+0.4
4,632,614	-				-0.2
4,632,614	-				-1.4
4,632,614	-				+0.1
4,632,614	-				-0.4
4,632,614	-				+0.7
4,632,614	-				-0.1
4,632,615	+				+0.3
4,632,615	+				+0.9
4,632,615	+				-1.1
4,632,615	+				+0.3
4,632,615	+				-0.1
4,632,615	+				-0.1
4,632,615	+				-1.6
4,632,615	+				+0.4
4,632,615	+				-0.7
4,632,616	-				-1.0
4,632,616	-				-1.0
4,632,616	-				+0.6
4,632,616	-				+2.6
4,632,616	-				+1.2
4,632,616	-				-0.3
4,632,616	-				+1.9
4,632,616	-				-0.0
4,632,624	-				+1.8
4,632,637	+				-0.7
4,632,637	+				+0.7
4,632,637	+				-0.4
4,632,637	+				+1.5
4,632,638	-				-1.6
4,632,638	-				-1.1
4,632,655	+		DZA65_RS21425	0.10	-1.7
4,632,656	-		DZA65_RS21425	0.10	-1.1
4,632,656	-		DZA65_RS21425	0.10	-1.1
4,632,656	-		DZA65_RS21425	0.10	-2.1
4,632,656	-		DZA65_RS21425	0.10	+0.2
4,632,656	-		DZA65_RS21425	0.10	+0.6
4,632,666	+		DZA65_RS21425	0.11	-2.6
4,632,667	-		DZA65_RS21425	0.11	+0.8
4,632,681	+		DZA65_RS21425	0.12	-0.5
4,632,682	-		DZA65_RS21425	0.12	+1.3
4,632,682	-		DZA65_RS21425	0.12	-0.1
4,632,682	-		DZA65_RS21425	0.12	+0.6
4,632,682	-		DZA65_RS21425	0.12	+0.9
4,632,688	-		DZA65_RS21425	0.12	-0.3
4,632,688	-		DZA65_RS21425	0.12	+0.9
4,632,692	+		DZA65_RS21425	0.12	-2.4
4,632,692	+		DZA65_RS21425	0.12	-0.7
4,632,692	+		DZA65_RS21425	0.12	+0.6
4,632,692	+		DZA65_RS21425	0.12	-1.7
4,632,692	+		DZA65_RS21425	0.12	-1.5
4,632,692	+		DZA65_RS21425	0.12	-0.1
4,632,692	+		DZA65_RS21425	0.12	-0.7
4,632,693	-		DZA65_RS21425	0.12	+0.1
4,632,693	-		DZA65_RS21425	0.12	+0.8
4,632,693	-		DZA65_RS21425	0.12	-0.1
4,632,693	-		DZA65_RS21425	0.12	-2.1
4,632,693	-		DZA65_RS21425	0.12	+0.2
4,632,693	-		DZA65_RS21425	0.12	+0.1
4,632,693	-		DZA65_RS21425	0.12	-0.1
4,632,693	-		DZA65_RS21425	0.12	+0.4
4,632,693	-		DZA65_RS21425	0.12	-0.0
4,632,732	+		DZA65_RS21425	0.14	-0.7
4,632,732	+		DZA65_RS21425	0.14	-0.4
4,632,732	+		DZA65_RS21425	0.14	+1.0
4,632,733	-		DZA65_RS21425	0.14	-1.1
4,632,733	-		DZA65_RS21425	0.14	+0.3
4,632,733	-		DZA65_RS21425	0.14	+1.4
4,632,748	+		DZA65_RS21425	0.15	-1.4
4,632,748	+		DZA65_RS21425	0.15	-0.3
4,632,748	+		DZA65_RS21425	0.15	-0.8
4,632,748	+		DZA65_RS21425	0.15	+1.0
4,632,749	-		DZA65_RS21425	0.15	+1.5
4,632,749	-				+0.9
4,632,808	+		DZA65_RS21425	0.18	+0.9
4,632,809	-		DZA65_RS21425	0.18	-1.9
4,632,809	-		DZA65_RS21425	0.18	+0.5
4,632,809	-		DZA65_RS21425	0.18	-0.4
4,632,833	-		DZA65_RS21425	0.20	-2.1
4,632,863	+		DZA65_RS21425	0.21	-0.5
4,632,864	-		DZA65_RS21425	0.21	+0.3
4,632,880	+		DZA65_RS21425	0.22	-0.7
4,632,880	+		DZA65_RS21425	0.22	-0.1
4,632,880	+		DZA65_RS21425	0.22	-0.9
4,632,880	+		DZA65_RS21425	0.22	-0.9
4,632,881	-		DZA65_RS21425	0.22	-1.0
4,632,888	+		DZA65_RS21425	0.23	-2.7
4,632,888	+		DZA65_RS21425	0.23	+0.9
4,632,888	+		DZA65_RS21425	0.23	+1.5
4,632,889	-		DZA65_RS21425	0.23	+0.3
4,632,889	-		DZA65_RS21425	0.23	-0.6
4,632,889	-		DZA65_RS21425	0.23	+0.4
4,632,921	+		DZA65_RS21425	0.24	-1.1
4,632,921	+				+0.9
4,632,921	+		DZA65_RS21425	0.24	-3.0
4,632,921	+		DZA65_RS21425	0.24	+1.9
4,632,922	-		DZA65_RS21425	0.24	+1.8
4,632,922	-		DZA65_RS21425	0.24	-0.1
4,632,922	-		DZA65_RS21425	0.24	+1.0
4,632,934	+		DZA65_RS21425	0.25	-0.8
4,632,935	-		DZA65_RS21425	0.25	-1.1
4,632,937	+		DZA65_RS21425	0.25	-0.9
4,632,938	-		DZA65_RS21425	0.25	+0.3
4,632,938	-		DZA65_RS21425	0.25	+0.2
4,632,938	-		DZA65_RS21425	0.25	+0.2
4,633,056	+		DZA65_RS21425	0.31	+0.8
4,633,056	+		DZA65_RS21425	0.31	-0.1
4,633,056	+		DZA65_RS21425	0.31	-0.0
4,633,056	+		DZA65_RS21425	0.31	+0.5
4,633,056	+		DZA65_RS21425	0.31	+1.5
4,633,057	-		DZA65_RS21425	0.31	+0.3
4,633,057	-		DZA65_RS21425	0.31	-0.8
4,633,102	+		DZA65_RS21425	0.34	-0.0
4,633,103	-		DZA65_RS21425	0.34	-0.5
4,633,108	-		DZA65_RS21425	0.34	-0.0
4,633,108	-		DZA65_RS21425	0.34	+0.1
4,633,165	+		DZA65_RS21425	0.37	+0.0
4,633,166	-		DZA65_RS21425	0.37	-0.9
4,633,216	+		DZA65_RS21425	0.40	+0.4
4,633,217	-		DZA65_RS21425	0.40	+1.0
4,633,217	-		DZA65_RS21425	0.40	-0.5
4,633,229	+		DZA65_RS21425	0.41	-1.1
4,633,229	+		DZA65_RS21425	0.41	-1.4
4,633,229	+		DZA65_RS21425	0.41	-0.3
4,633,229	+		DZA65_RS21425	0.41	+0.4
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4,633,264	+		DZA65_RS21425	0.42	-1.1
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