Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21160

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,573,338	+				-0.0
4,573,338	+				+0.3
4,573,338	+				-1.7
4,573,338	+				-0.1
4,573,338	+				+2.1
4,573,338	+				+0.4
4,573,338	+				-0.7
4,573,338	+				-2.4
4,573,339	-				-1.4
4,573,339	-				-0.2
4,573,339	-				-0.1
4,573,339	-				-0.1
4,573,339	-				-0.4
4,573,339	-				-0.4
4,573,339	-				-0.5
4,573,339	-				-0.3
4,573,339	-				+1.0
4,573,339	-				-0.5
4,573,339	-				-1.1
4,573,339	-				-0.1
4,573,371	+				-2.1
4,573,371	+				+0.1
4,573,371	+				+0.1
4,573,371	+				+0.1
4,573,371	+				-0.4
4,573,371	+				-0.2
4,573,372	-				+1.6
4,573,372	-				-0.3
4,573,384	+				+0.1
4,573,385	-				+0.3
4,573,385	-				+1.0
4,573,397	+				-0.1
4,573,397	+				-1.3
4,573,397	+				-1.1
4,573,398	-				+0.5
4,573,403	+				+0.1
4,573,403	+				-1.3
4,573,403	+				+0.5
4,573,403	+				-0.2
4,573,403	+				-1.1
4,573,403	+				-0.8
4,573,403	+				+0.3
4,573,403	+				-1.3
4,573,403	+				-0.1
4,573,404	-				+0.7
4,573,404	-				-0.5
4,573,404	-				+0.2
4,573,404	-				+1.0
4,573,404	-				+2.6
4,573,404	-				+0.1
4,573,421	+				-0.1
4,573,421	+				-0.0
4,573,421	+				+0.7
4,573,421	+				+1.1
4,573,421	+				-0.4
4,573,422	-				+0.2
4,573,422	-				-1.1
4,573,464	+				+0.3
4,573,464	+				-1.3
4,573,464	+				+1.3
4,573,465	-				+0.1
4,573,494	+				-0.1
4,573,528	+				+0.2
4,573,528	+				-1.1
4,573,695	+		DZA65_RS21155	0.30	+0.9
4,573,695	+		DZA65_RS21155	0.30	+1.1
4,573,695	+		DZA65_RS21155	0.30	-0.8
4,573,695	+		DZA65_RS21155	0.30	-1.3
4,573,696	-		DZA65_RS21155	0.30	-0.9
4,573,696	-		DZA65_RS21155	0.30	-0.7
4,573,696	-		DZA65_RS21155	0.30	-1.6
4,573,696	-		DZA65_RS21155	0.30	-0.3
4,573,696	-		DZA65_RS21155	0.30	-0.8
4,573,749	+		DZA65_RS21155	0.37	+0.6
4,573,749	+		DZA65_RS21155	0.37	+1.6
4,573,749	+		DZA65_RS21155	0.37	-1.8
4,573,749	+		DZA65_RS21155	0.37	-1.6
4,573,749	+		DZA65_RS21155	0.37	+0.0
4,573,749	+		DZA65_RS21155	0.37	+0.5
4,573,750	-		DZA65_RS21155	0.37	+1.1
4,573,750	-		DZA65_RS21155	0.37	+0.7
4,573,750	-		DZA65_RS21155	0.37	-2.1
4,573,855	+		DZA65_RS21155	0.51	+1.1
4,573,855	+		DZA65_RS21155	0.51	+0.5
4,573,856	-		DZA65_RS21155	0.51	-0.4
4,573,856	-		DZA65_RS21155	0.51	+0.4
4,573,856	-		DZA65_RS21155	0.51	+2.2
4,573,856	-		DZA65_RS21155	0.51	+1.6
4,573,856	-		DZA65_RS21155	0.51	+0.9
4,573,876	+		DZA65_RS21155	0.53	+0.4
4,573,876	+		DZA65_RS21155	0.53	-0.5
4,573,877	-		DZA65_RS21155	0.53	+1.0
4,573,877	-		DZA65_RS21155	0.53	-0.3
4,573,877	-		DZA65_RS21155	0.53	-0.7
4,573,900	-		DZA65_RS21155	0.56	-0.9
4,573,900	-		DZA65_RS21155	0.56	-0.7
4,573,900	-		DZA65_RS21155	0.56	-1.2
4,573,900	-		DZA65_RS21155	0.56	-0.2
4,573,902	+		DZA65_RS21155	0.57	-0.7
4,573,902	+		DZA65_RS21155	0.57	-0.1
4,573,902	+		DZA65_RS21155	0.57	+0.5
4,573,902	+				-0.1
4,573,902	+		DZA65_RS21155	0.57	+1.5
4,573,902	+		DZA65_RS21155	0.57	+1.1
4,573,902	+		DZA65_RS21155	0.57	-0.1
4,573,902	+		DZA65_RS21155	0.57	+0.1
4,573,903	-		DZA65_RS21155	0.57	+0.9
4,573,908	+		DZA65_RS21155	0.57	-1.2
4,573,908	+		DZA65_RS21155	0.57	+0.1
4,573,908	+		DZA65_RS21155	0.57	-0.6
4,573,909	-		DZA65_RS21155	0.58	-1.4
4,573,926	+		DZA65_RS21155	0.60	+0.2
4,573,926	+		DZA65_RS21155	0.60	-0.1
4,573,926	+		DZA65_RS21155	0.60	-0.2
4,573,926	+		DZA65_RS21155	0.60	+1.0
4,574,040	+		DZA65_RS21155	0.75	-0.8
4,574,040	+		DZA65_RS21155	0.75	-0.4
4,574,040	+		DZA65_RS21155	0.75	-0.1
4,574,040	+		DZA65_RS21155	0.75	+0.2
4,574,040	+		DZA65_RS21155	0.75	-0.7
4,574,041	-		DZA65_RS21155	0.75	+2.9
4,574,041	-		DZA65_RS21155	0.75	-0.1
4,574,041	-		DZA65_RS21155	0.75	+0.1
4,574,041	-		DZA65_RS21155	0.75	-0.7
4,574,041	-		DZA65_RS21155	0.75	+1.2
4,574,122	-		DZA65_RS21155	0.85	-1.9
4,574,155	+		DZA65_RS21155	0.89	-0.0
4,574,204	+				-0.2
4,574,210	+				+0.9
4,574,238	+				-0.3
4,574,238	+				+0.5
4,574,238	+				-1.1
4,574,239	-				-0.0
4,574,239	-				-0.3
4,574,239	-				+0.1
4,574,239	-				+0.6
4,574,239	-				+0.4
4,574,241	-				-2.1
4,574,241	-				+0.7
4,574,258	+				-0.1
4,574,277	+				-0.7
4,574,277	+				-0.9
4,574,278	-				-1.4
4,574,368	+		DZA65_RS21160	0.24	-1.1
4,574,370	+		DZA65_RS21160	0.25	+1.7
4,574,371	-		DZA65_RS21160	0.25	+0.9
4,574,509	+		DZA65_RS21160	0.51	-0.3
4,574,613	+		DZA65_RS21160	0.70	+0.9
4,574,613	+		DZA65_RS21160	0.70	+1.6
4,574,613	+		DZA65_RS21160	0.70	-0.7
4,574,613	+		DZA65_RS21160	0.70	-0.0
4,574,613	+				+2.5
4,574,613	+		DZA65_RS21160	0.70	+0.6
4,574,614	-		DZA65_RS21160	0.70	+1.8
4,574,614	-		DZA65_RS21160	0.70	+0.4
4,574,632	+		DZA65_RS21160	0.74	+0.4
4,574,661	+		DZA65_RS21160	0.79	+0.6
4,574,703	+		DZA65_RS21160	0.87	-2.4
4,574,762	+				+0.7
4,574,762	+				+0.1
4,574,762	+				+1.4
4,574,762	+				+0.7
4,574,762	+				-0.1
4,574,762	+				+0.0
4,574,762	+				-1.7
4,574,762	+				+0.0
4,574,762	+				-1.4
4,574,763	-				-1.9
4,574,763	-				-0.4
4,574,763	-				-0.5
4,574,763	-				+0.1
4,574,763	-				-0.1
4,574,763	-				-1.9
4,574,858	+				+0.1
4,574,858	+				-0.5
4,574,858	+				-0.1
4,574,858	+				-0.8
4,574,858	+				-1.4
4,574,858	+				+0.2
4,574,858	+				+0.2
4,574,858	+				+0.4
4,574,858	+				+1.9
4,574,858	+				-1.9
4,574,858	+				+0.1
4,574,858	+				+1.6
4,574,859	-				-0.5
4,574,859	-				-0.5
4,574,859	-				-1.9
4,574,859	-				-0.1
4,574,859	-				-1.1
4,574,859	-				-0.3
4,574,859	-				+1.3
4,574,859	-				-0.2
4,574,859	-				-0.3
4,574,859	-				-0.4
4,574,859	-				-0.1
4,574,932	+		DZA65_RS21165	0.11	+0.9
4,574,981	+		DZA65_RS21165	0.14	-0.9
4,574,981	+		DZA65_RS21165	0.14	-1.1
4,574,981	+		DZA65_RS21165	0.14	+0.1
4,574,982	-		DZA65_RS21165	0.14	-0.3
4,574,982	-		DZA65_RS21165	0.14	-1.3
4,575,105	+		DZA65_RS21165	0.23	-0.1
4,575,106	-		DZA65_RS21165	0.24	-1.1
4,575,149	+		DZA65_RS21165	0.27	-0.1
4,575,149	+		DZA65_RS21165	0.27	+0.3
4,575,149	+		DZA65_RS21165	0.27	+0.3
4,575,149	+		DZA65_RS21165	0.27	-0.7
4,575,149	+		DZA65_RS21165	0.27	-2.3
4,575,149	+		DZA65_RS21165	0.27	+0.7
4,575,149	+		DZA65_RS21165	0.27	+1.5
4,575,149	+		DZA65_RS21165	0.27	+1.6
4,575,149	+		DZA65_RS21165	0.27	-0.7
4,575,149	+		DZA65_RS21165	0.27	+0.1
4,575,149	+		DZA65_RS21165	0.27	-0.7
4,575,149	+		DZA65_RS21165	0.27	+0.1
4,575,149	+		DZA65_RS21165	0.27	-0.4
4,575,149	+		DZA65_RS21165	0.27	+0.4
4,575,149	+		DZA65_RS21165	0.27	+0.3
4,575,150	-		DZA65_RS21165	0.27	-0.8
4,575,150	-		DZA65_RS21165	0.27	-0.9
4,575,150	-		DZA65_RS21165	0.27	+0.3
4,575,150	-		DZA65_RS21165	0.27	-1.7
4,575,150	-				+0.1
4,575,150	-		DZA65_RS21165	0.27	-1.5
4,575,150	-		DZA65_RS21165	0.27	+0.2
4,575,153	+		DZA65_RS21165	0.27	+0.7
4,575,153	+		DZA65_RS21165	0.27	+0.8
4,575,153	+		DZA65_RS21165	0.27	+0.1
4,575,154	-		DZA65_RS21165	0.27	+0.9
4,575,154	-		DZA65_RS21165	0.27	-0.4
4,575,154	-		DZA65_RS21165	0.27	+0.1
4,575,154	-		DZA65_RS21165	0.27	-1.7
4,575,154	-		DZA65_RS21165	0.27	-1.3
4,575,383	+		DZA65_RS21165	0.44	+0.6
4,575,383	+		DZA65_RS21165	0.44	+0.3
4,575,383	+		DZA65_RS21165	0.44	-2.1
4,575,383	+		DZA65_RS21165	0.44	+1.3
4,575,383	+		DZA65_RS21165	0.44	-0.0
4,575,383	+		DZA65_RS21165	0.44	+0.3
4,575,383	+		DZA65_RS21165	0.44	+0.1
4,575,384	-		DZA65_RS21165	0.44	-1.7
4,575,384	-		DZA65_RS21165	0.44	-0.7
4,575,384	-		DZA65_RS21165	0.44	-0.7
4,575,402	+		DZA65_RS21165	0.45	+0.1
4,575,403	-		DZA65_RS21165	0.45	+0.1
4,575,403	-		DZA65_RS21165	0.45	-2.9
4,575,403	-		DZA65_RS21165	0.45	-0.1
4,575,403	-		DZA65_RS21165	0.45	-0.5
4,575,440	+		DZA65_RS21165	0.48	+0.4
4,575,440	+		DZA65_RS21165	0.48	-1.8
4,575,551	+		DZA65_RS21165	0.56	+0.0
4,575,551	+		DZA65_RS21165	0.56	+0.6
4,575,551	+		DZA65_RS21165	0.56	-0.7
4,575,551	+		DZA65_RS21165	0.56	+0.5
4,575,552	-		DZA65_RS21165	0.56	-0.7
4,575,552	-		DZA65_RS21165	0.56	-0.7
4,575,552	-		DZA65_RS21165	0.56	-1.1
4,575,552	-		DZA65_RS21165	0.56	+0.6
4,575,552	-		DZA65_RS21165	0.56	+0.1
4,575,573	+		DZA65_RS21165	0.58	+0.1
4,575,573	+		DZA65_RS21165	0.58	-1.0
4,575,573	+		DZA65_RS21165	0.58	-1.1
4,575,573	+		DZA65_RS21165	0.58	+1.1
4,575,573	+		DZA65_RS21165	0.58	+0.3
4,575,574	-		DZA65_RS21165	0.58	+0.0
4,575,574	-		DZA65_RS21165	0.58	+0.6
4,575,694	-		DZA65_RS21165	0.67	+0.2