Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21050

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,551,776	-		DZA65_RS21045	0.57	+0.9
4,551,847	+		DZA65_RS21045	0.60	-0.5
4,551,848	-		DZA65_RS21045	0.60	-1.7
4,551,848	-		DZA65_RS21045	0.60	-2.8
4,551,848	-		DZA65_RS21045	0.60	+2.3
4,551,879	+		DZA65_RS21045	0.62	+0.9
4,551,879	+		DZA65_RS21045	0.62	+0.9
4,551,879	+		DZA65_RS21045	0.62	-1.5
4,551,880	-		DZA65_RS21045	0.62	-0.1
4,551,880	-		DZA65_RS21045	0.62	+1.4
4,551,880	-		DZA65_RS21045	0.62	-0.1
4,551,880	-		DZA65_RS21045	0.62	+0.2
4,551,880	-		DZA65_RS21045	0.62	-0.7
4,551,959	+		DZA65_RS21045	0.67	+0.7
4,551,960	-		DZA65_RS21045	0.67	+0.1
4,551,965	+		DZA65_RS21045	0.67	-1.0
4,552,068	+		DZA65_RS21045	0.72	+0.0
4,552,069	-		DZA65_RS21045	0.73	-1.5
4,552,069	-		DZA65_RS21045	0.73	-1.1
4,552,087	+		DZA65_RS21045	0.73	+0.7
4,552,145	+		DZA65_RS21045	0.77	-1.9
4,552,145	+		DZA65_RS21045	0.77	+0.5
4,552,146	-		DZA65_RS21045	0.77	+0.1
4,552,213	+		DZA65_RS21045	0.80	+2.3
4,552,213	+		DZA65_RS21045	0.80	+0.5
4,552,213	+		DZA65_RS21045	0.80	-1.3
4,552,213	+		DZA65_RS21045	0.80	+0.6
4,552,213	+		DZA65_RS21045	0.80	+0.3
4,552,213	+		DZA65_RS21045	0.80	-0.9
4,552,213	+		DZA65_RS21045	0.80	+0.1
4,552,213	+		DZA65_RS21045	0.80	+0.6
4,552,213	+		DZA65_RS21045	0.80	-0.9
4,552,213	+		DZA65_RS21045	0.80	-0.1
4,552,213	+		DZA65_RS21045	0.80	-0.3
4,552,214	-		DZA65_RS21045	0.80	+0.9
4,552,214	-		DZA65_RS21045	0.80	+1.6
4,552,214	-		DZA65_RS21045	0.80	+1.2
4,552,214	-		DZA65_RS21045	0.80	-0.2
4,552,214	-		DZA65_RS21045	0.80	-1.9
4,552,214	-		DZA65_RS21045	0.80	-1.1
4,552,214	-		DZA65_RS21045	0.80	-1.6
4,552,309	+		DZA65_RS21045	0.86	+0.6
4,552,310	-		DZA65_RS21045	0.86	-1.1
4,552,310	-		DZA65_RS21045	0.86	-0.4
4,552,402	+				+0.1
4,552,402	+				+3.1
4,552,436	+				+1.5
4,552,473	-				-1.5
4,552,473	-				-2.7
4,552,504	+				-1.7
4,552,505	-				-2.3
4,552,554	+				+0.3
4,552,554	+				+0.7
4,552,554	+				-0.1
4,552,555	-				-0.5
4,552,555	-				+1.1
4,552,592	-				+0.5
4,552,613	-				+0.7
4,552,613	-				-1.5
4,552,613	-				-0.0
4,552,617	-				+0.3
4,552,617	-				+0.9
4,552,731	+				-0.3
4,552,731	+				+1.7
4,552,732	-				+1.1
4,552,732	-				-1.0
4,552,732	-				+0.7
4,552,732	-				-0.9
4,552,732	-				+0.1
4,552,732	-				-0.4
4,552,732	-				+0.4
4,552,732	-				+0.1
4,552,732	-				+0.1
4,552,778	+		DZA65_RS21050	0.64	-2.8
4,552,778	+		DZA65_RS21050	0.64	-1.2
4,552,778	+		DZA65_RS21050	0.64	+0.3
4,552,815	+				-1.9
4,552,816	-				+1.9
4,552,816	-				+1.9
4,552,824	+				+1.4
4,552,829	+				+1.6
4,552,829	+				+0.7
4,552,829	+				-0.7
4,552,829	+				+0.2
4,552,829	+				+0.1
4,552,829	+				-0.9
4,552,830	-				-1.0
4,552,830	-				+0.5
4,552,830	-				-1.5
4,552,830	-				+0.9
4,552,830	-				+0.3
4,552,830	-				+1.1
4,552,830	-				-0.1
4,552,866	+				+1.5
4,552,866	+				-1.4
4,552,866	+				-0.0
4,552,866	+				+0.0
4,552,866	+				+0.4
4,552,866	+				+1.1
4,552,866	+				-0.7
4,552,867	-				+1.1
4,552,867	-				-0.6
4,552,867	-				+0.2
4,552,867	-				+0.8
4,552,867	-				-0.1
4,552,867	-				-0.7
4,552,867	-				+0.6
4,552,867	-				+0.3
4,552,867	-				+0.2
4,552,867	-				-0.2
4,552,867	-				-0.1
4,552,867	-				-1.1
4,552,868	+				-1.1
4,552,894	+				+0.5
4,552,895	-				-3.0
4,552,920	+				+0.9
4,552,931	+				-0.5
4,552,985	+				+0.9
4,552,985	+				+0.1
4,552,985	+				+0.2
4,552,985	+				-1.5
4,552,985	+				-1.3
4,552,986	-				+0.7
4,552,986	-				+1.1
4,552,986	-				+1.2
4,552,986	-				+0.6
4,552,986	-				-0.7
4,552,988	+				+0.4
4,552,988	+				+0.0
4,552,988	+				+0.3
4,552,989	-				+0.3
4,552,989	-				-1.5
4,552,989	-				-0.2
4,552,989	-				-0.0
4,552,989	-				+0.5
4,552,989	-				-0.1
4,552,989	-				-1.1
4,552,989	-				-0.6
4,552,989	-				-0.0
4,552,989	-				+0.4
4,553,011	+				+2.1
4,553,011	+				+0.5
4,553,011	+				-1.6
4,553,011	+				+0.6
4,553,011	+				-0.5
4,553,011	+				-0.7
4,553,011	+				+0.4
4,553,011	+				-1.1
4,553,011	+				+0.2
4,553,011	+				+0.2
4,553,011	+				+0.0
4,553,011	+				+0.9
4,553,011	+				-0.4
4,553,011	+				+0.0
4,553,011	+				-0.4
4,553,011	+				-1.1
4,553,011	+				+0.3
4,553,011	+				+0.9
4,553,011	+				-0.7
4,553,011	+				-0.5
4,553,011	+				+0.6
4,553,011	+				-0.3
4,553,011	+				-0.3
4,553,011	+				-0.3
4,553,011	+				+0.9
4,553,011	+				+0.3
4,553,011	+				-0.7
4,553,011	+				+3.0
4,553,011	+				+0.5
4,553,011	+				-0.1
4,553,012	-				-0.6
4,553,012	-				+0.6
4,553,012	-				-2.3
4,553,012	-				+1.9
4,553,012	-				+0.1
4,553,012	-				+0.3
4,553,012	-				+0.8
4,553,012	-				-0.1
4,553,012	-				-0.9
4,553,012	-				+0.9
4,553,012	-				+1.5
4,553,012	-				-1.1
4,553,012	-				-0.5
4,553,012	-				+0.9
4,553,012	-				+0.9
4,553,012	-				+1.3
4,553,012	-				-0.0
4,553,012	-				-0.7
4,553,012	-				+0.3
4,553,012	-				-0.5
4,553,012	-				+0.3
4,553,036	+		DZA65_RS21055	0.12	+0.8
4,553,037	-		DZA65_RS21055	0.12	-0.4
4,553,037	-		DZA65_RS21055	0.12	+1.1
4,553,040	+		DZA65_RS21055	0.13	+1.6
4,553,040	+		DZA65_RS21055	0.13	+1.2
4,553,040	+		DZA65_RS21055	0.13	-1.5
4,553,040	+		DZA65_RS21055	0.13	+0.2
4,553,040	+		DZA65_RS21055	0.13	-0.5
4,553,040	+		DZA65_RS21055	0.13	+0.3
4,553,041	-		DZA65_RS21055	0.13	+0.8
4,553,041	-		DZA65_RS21055	0.13	+0.1
4,553,107	+		DZA65_RS21055	0.27	+0.3
4,553,304	+		DZA65_RS21055	0.69	-0.5
4,553,304	+		DZA65_RS21055	0.69	+1.7
4,553,304	+		DZA65_RS21055	0.69	-1.1
4,553,305	-		DZA65_RS21055	0.69	-0.1
4,553,305	-		DZA65_RS21055	0.69	-1.5
4,553,305	-		DZA65_RS21055	0.69	-0.8
4,553,305	-		DZA65_RS21055	0.69	-0.1
4,553,367	-				+0.3
4,553,392	+		DZA65_RS21055	0.87	-0.4
4,553,392	+		DZA65_RS21055	0.87	+0.6
4,553,393	-		DZA65_RS21055	0.88	-0.4
4,553,393	-		DZA65_RS21055	0.88	-1.1
4,553,393	-		DZA65_RS21055	0.88	-0.1
4,553,393	-		DZA65_RS21055	0.88	+0.1
4,553,396	+		DZA65_RS21055	0.88	+0.6
4,553,397	-		DZA65_RS21055	0.89	-0.6
4,553,436	+				-1.0
4,553,436	+				+0.5
4,553,436	+				-0.1
4,553,436	+				-0.7
4,553,436	+				-0.4
4,553,436	+				-0.1
4,553,436	+				-0.1
4,553,436	+				+0.2
4,553,437	-				+0.1
4,553,437	-				+0.9
4,553,437	-				+0.1
4,553,512	+				-1.2
4,553,548	+				+0.9
4,553,548	+				-0.1
4,553,549	-				+0.9
4,553,549	-				+1.9
4,553,549	-				-1.2
4,553,559	-				+0.4
4,553,559	-				-0.4
4,553,559	-				-2.9
4,553,559	-				+1.4
4,553,559	-				+0.9
4,553,559	-				-2.3
4,553,559	-				-2.1
4,553,581	+				+0.1
4,553,582	-				+1.5
4,553,601	+				+0.9
4,553,601	+				-2.3
4,553,601	+				-0.7
4,553,601	+				+1.7
4,553,601	+				+1.7
4,553,601	+				+1.1
4,553,601	+				+0.3
4,553,601	+				+0.9
4,553,601	+				+1.2
4,553,601	+				+1.6
4,553,602	-				-0.1
4,553,602	-				+1.6
4,553,602	-				+0.9
4,553,602	-				+1.5
4,553,602	-				+0.6
4,553,602	-				+0.8
4,553,602	-				-0.5
4,553,602	-				+1.1
4,553,602	-				-0.4
4,553,602	-				-0.5
4,553,602	-				-0.5
4,553,602	-				-0.0
4,553,602	-				-0.0
4,553,603	+				+0.5
4,553,603	+				-0.2
4,553,603	+				-0.7
4,553,603	+				-0.3
4,553,603	+				-0.5
4,553,603	+				-1.1
4,553,603	+				-0.6
4,553,603	+				+0.1
4,553,603	+				-1.9
4,553,603	+				-0.1
4,553,603	+				-1.3
4,553,603	+				-0.5
4,553,603	+				+0.4
4,553,603	+				-0.0
4,553,603	+				+1.5
4,553,603	+				-0.5
4,553,603	+				+0.9
4,553,603	+				+0.8
4,553,603	+				+1.0
4,553,603	+				-0.4
4,553,604	-				-0.2
4,553,604	-				-0.5
4,553,604	-				-0.1
4,553,604	-				-0.5
4,553,604	-				-0.5
4,553,604	-				-0.9
4,553,628	+				+0.5
4,553,628	+				+0.0
4,553,682	-		DZA65_RS21060	0.14	-0.1
4,553,726	+		DZA65_RS21060	0.19	-0.1
4,553,726	+		DZA65_RS21060	0.19	-0.1
4,553,727	-		DZA65_RS21060	0.19	+0.4
4,553,727	-		DZA65_RS21060	0.19	+1.5