Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15530

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
3,365,313	-				-0.3
3,365,313	-				+1.7
3,365,313	-				+1.3
3,365,316	-				+0.8
3,365,333	+				-0.9
3,365,337	+				-0.1
3,365,545	-				+0.7
3,365,808	+				+0.3
3,365,809	-				-1.4
3,365,849	-				-1.7
3,365,861	+				+0.0
3,365,862	-				+0.6
3,365,862	-				+0.4
3,365,893	-				+0.0
3,365,959	+				+1.0
3,366,040	+				-0.4
3,366,114	+				-0.3
3,366,157	-				-0.1
3,366,167	+				-0.8
3,366,167	+				-0.6
3,366,167	+				+1.2
3,366,171	+				+1.3
3,366,181	+				+0.7
3,366,181	+				+0.2
3,366,181	+				-0.3
3,366,182	-				-0.6
3,366,183	+				+1.1
3,366,183	+				-0.9
3,366,183	+				+0.4
3,366,183	+				+0.7
3,366,183	+				+0.1
3,366,184	-				+1.3
3,366,184	-				+0.7
3,366,203	+				-0.2
3,366,225	+				-0.7
3,366,320	+				+0.2
3,366,379	+		DZA65_RS15530	0.15	-0.2
3,366,379	+		DZA65_RS15530	0.15	-2.0
3,366,380	-		DZA65_RS15530	0.15	+2.0
3,366,405	+		DZA65_RS15530	0.18	-1.0
3,366,406	-		DZA65_RS15530	0.18	+0.0
3,366,415	+		DZA65_RS15530	0.19	-0.4
3,366,415	+		DZA65_RS15530	0.19	-0.3
3,366,415	+		DZA65_RS15530	0.19	-2.4
3,366,415	+		DZA65_RS15530	0.19	-1.9
3,366,415	+		DZA65_RS15530	0.19	-0.1
3,366,416	-		DZA65_RS15530	0.19	-1.2
3,366,416	-		DZA65_RS15530	0.19	+0.3
3,366,416	-		DZA65_RS15530	0.19	-0.2
3,366,416	-		DZA65_RS15530	0.19	-0.6
3,366,421	-		DZA65_RS15530	0.20	-0.9
3,366,494	-		DZA65_RS15530	0.29	-0.9
3,366,531	+		DZA65_RS15530	0.33	-0.0
3,366,531	+		DZA65_RS15530	0.33	-0.1
3,366,532	-		DZA65_RS15530	0.33	-0.8
3,366,532	-		DZA65_RS15530	0.33	+1.2
3,366,643	-		DZA65_RS15530	0.47	-0.8
3,366,673	-		DZA65_RS15530	0.51	+0.0
3,366,745	+		DZA65_RS15530	0.60	-0.1
3,366,745	+		DZA65_RS15530	0.60	-1.0
3,366,746	-		DZA65_RS15530	0.60	-0.4
3,366,766	+		DZA65_RS15530	0.62	-0.3
3,366,766	+		DZA65_RS15530	0.62	-1.7
3,366,767	-		DZA65_RS15530	0.62	+0.4
3,366,767	-		DZA65_RS15530	0.62	+0.0
3,366,821	+		DZA65_RS15530	0.69	-0.1
3,366,837	+		DZA65_RS15530	0.71	-0.5
3,366,837	+		DZA65_RS15530	0.71	-0.8
3,366,837	+		DZA65_RS15530	0.71	-1.4
3,366,837	+		DZA65_RS15530	0.71	-0.3
3,366,838	-		DZA65_RS15530	0.71	+2.5
3,366,838	-		DZA65_RS15530	0.71	+2.2
3,366,838	-		DZA65_RS15530	0.71	-0.7
3,366,838	-		DZA65_RS15530	0.71	-0.4
3,366,838	-		DZA65_RS15530	0.71	-1.6
3,366,876	+		DZA65_RS15530	0.76	-0.2
3,366,876	+		DZA65_RS15530	0.76	+0.1
3,366,876	+		DZA65_RS15530	0.76	-1.5
3,366,876	+		DZA65_RS15530	0.76	+1.0
3,366,876	+		DZA65_RS15530	0.76	+2.0
3,366,877	-		DZA65_RS15530	0.76	+2.4
3,366,877	-		DZA65_RS15530	0.76	+0.0
3,366,877	-		DZA65_RS15530	0.76	+0.1
3,366,877	-		DZA65_RS15530	0.76	+1.0
3,366,917	+		DZA65_RS15530	0.81	+0.2
3,366,950	-		DZA65_RS15530	0.85	+1.6
3,366,950	-		DZA65_RS15530	0.85	+0.9
3,366,967	-		DZA65_RS15530	0.87	-0.6
3,366,999	+				-0.3
3,366,999	+				+1.0
3,366,999	+				+0.8
3,366,999	+				-1.9
3,367,000	-				+0.7
3,367,000	-				-0.5
3,367,027	+				+1.0
3,367,027	+				+1.2
3,367,027	+				+1.1
3,367,028	-				-1.0
3,367,034	-				-1.4
3,367,138	-				-0.4
3,367,173	+				-0.5
3,367,174	-				-0.8
3,367,243	+				+0.7
3,367,244	-				-0.6
3,367,248	+				+0.2
3,367,248	+				+2.3
3,367,248	+				-0.2
3,367,248	+				+0.0
3,367,248	+				-0.7
3,367,248	+				+1.1
3,367,248	+				-2.4
3,367,248	+				+1.2
3,367,249	-				-0.3
3,367,249	-				-1.7
3,367,254	+				-0.6
3,367,254	+				-1.2
3,367,255	-				-0.9
3,367,255	-				-1.6
3,367,255	-				+0.8
3,367,270	+				-0.4
3,367,270	+				+1.2
3,367,270	+				-1.0
3,367,270	+				+1.5
3,367,270	+				+0.6
3,367,270	+				+0.9
3,367,271	-				+0.6
3,367,271	-				-1.2
3,367,271	-				+0.1
3,367,271	-				+1.4
3,367,271	-				-1.2
3,367,369	+				-0.1
3,367,601	-		DZA65_RS15535	0.18	-0.4
3,367,633	+		DZA65_RS15535	0.20	-0.1
3,367,645	+		DZA65_RS15535	0.20	-0.6
3,367,645	+		DZA65_RS15535	0.20	-1.2
3,367,645	+		DZA65_RS15535	0.20	+1.4
3,367,645	+		DZA65_RS15535	0.20	+1.4
3,367,742	+		DZA65_RS15535	0.26	-2.6
3,367,742	+		DZA65_RS15535	0.26	-0.0
3,367,742	+		DZA65_RS15535	0.26	-1.2
3,367,743	-		DZA65_RS15535	0.26	+0.5
3,367,789	+		DZA65_RS15535	0.28	+0.6
3,367,790	-		DZA65_RS15535	0.28	-0.9
3,367,790	-		DZA65_RS15535	0.28	+1.7
3,367,790	-		DZA65_RS15535	0.28	+1.2
3,367,798	+		DZA65_RS15535	0.29	+0.7
3,367,798	+		DZA65_RS15535	0.29	+0.5
3,367,798	+		DZA65_RS15535	0.29	+0.4
3,367,798	+		DZA65_RS15535	0.29	-0.7
3,367,799	-		DZA65_RS15535	0.29	-1.9
3,367,799	-		DZA65_RS15535	0.29	-0.4
3,367,799	-		DZA65_RS15535	0.29	-0.6
3,367,799	-		DZA65_RS15535	0.29	+0.1
3,367,799	-		DZA65_RS15535	0.29	+1.0
3,367,801	+		DZA65_RS15535	0.29	-0.1
3,367,801	+		DZA65_RS15535	0.29	+1.4
3,367,801	+		DZA65_RS15535	0.29	+0.4
3,367,802	-				+2.4
3,367,858	+		DZA65_RS15535	0.32	+0.5
3,367,858	+		DZA65_RS15535	0.32	+1.8
3,367,858	+		DZA65_RS15535	0.32	+0.3
3,367,858	+		DZA65_RS15535	0.32	+0.2
3,367,858	+		DZA65_RS15535	0.32	-0.8
3,367,858	+		DZA65_RS15535	0.32	-0.9
3,367,858	+		DZA65_RS15535	0.32	-0.9
3,367,858	+		DZA65_RS15535	0.32	+0.0
3,367,858	+		DZA65_RS15535	0.32	+0.2
3,367,859	-		DZA65_RS15535	0.32	+0.3
3,367,859	-		DZA65_RS15535	0.32	-0.8
3,367,859	-		DZA65_RS15535	0.32	-0.5
3,367,859	-		DZA65_RS15535	0.32	+0.2
3,367,859	-		DZA65_RS15535	0.32	+1.0
3,367,859	-		DZA65_RS15535	0.32	-0.6
3,367,859	-		DZA65_RS15535	0.32	-0.8
3,367,859	-		DZA65_RS15535	0.32	+0.2
3,367,868	+		DZA65_RS15535	0.32	+0.1