Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13065

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
2,801,581	+				-0.9
2,801,656	+				-2.1
2,801,656	+				+0.6
2,801,656	+				+0.2
2,801,656	+				-0.8
2,801,656	+				+0.1
2,801,656	+				+0.1
2,801,657	-				-0.3
2,801,657	-				+0.1
2,801,657	-				-1.1
2,801,657	-				-0.6
2,801,683	+				+2.3
2,801,683	+				-2.7
2,801,684	-				-2.0
2,801,726	+				-0.7
2,801,894	+				-2.1
2,801,895	-				+1.4
2,802,021	+		DZA65_RS13065	0.15	-1.3
2,802,021	+		DZA65_RS13065	0.15	-0.5
2,802,021	+		DZA65_RS13065	0.15	-0.1
2,802,022	-		DZA65_RS13065	0.15	-2.6
2,802,022	-		DZA65_RS13065	0.15	+0.9
2,802,022	-		DZA65_RS13065	0.15	-2.3
2,802,022	-		DZA65_RS13065	0.15	-1.3
2,802,022	-		DZA65_RS13065	0.15	+0.5
2,802,022	-		DZA65_RS13065	0.15	-1.5
2,802,055	+		DZA65_RS13065	0.16	-0.1
2,802,055	+		DZA65_RS13065	0.16	+0.3
2,802,056	-		DZA65_RS13065	0.16	+0.6
2,802,056	-		DZA65_RS13065	0.16	-2.3
2,802,059	+		DZA65_RS13065	0.16	-0.5
2,802,059	+		DZA65_RS13065	0.16	+0.8
2,802,059	+		DZA65_RS13065	0.16	-0.1
2,802,059	+		DZA65_RS13065	0.16	+0.5
2,802,060	-		DZA65_RS13065	0.16	+0.1
2,802,190	+		DZA65_RS13065	0.21	-1.3
2,802,232	+		DZA65_RS13065	0.23	-0.7
2,802,232	+		DZA65_RS13065	0.23	+1.1
2,802,278	+		DZA65_RS13065	0.24	+1.8
2,802,278	+		DZA65_RS13065	0.24	+0.3
2,802,278	+		DZA65_RS13065	0.24	+0.3
2,802,278	+		DZA65_RS13065	0.24	-1.1
2,802,278	+		DZA65_RS13065	0.24	-0.1
2,802,279	-		DZA65_RS13065	0.24	-2.1
2,802,279	-		DZA65_RS13065	0.24	-0.2
2,802,279	-		DZA65_RS13065	0.24	-1.1
2,802,279	-		DZA65_RS13065	0.24	+3.1
2,802,279	-		DZA65_RS13065	0.24	-0.8
2,802,279	-		DZA65_RS13065	0.24	+0.3
2,802,362	+		DZA65_RS13065	0.27	+1.3
2,802,363	-		DZA65_RS13065	0.27	-0.7
2,802,363	-		DZA65_RS13065	0.27	+0.3
2,802,380	+		DZA65_RS13065	0.28	-0.3
2,802,380	+		DZA65_RS13065	0.28	-1.8
2,802,391	+		DZA65_RS13065	0.28	+0.4
2,802,391	+		DZA65_RS13065	0.28	-0.6
2,802,391	+		DZA65_RS13065	0.28	-2.7
2,802,391	+		DZA65_RS13065	0.28	+0.3
2,802,391	+		DZA65_RS13065	0.28	+1.0
2,802,391	+		DZA65_RS13065	0.28	+0.3
2,802,392	-		DZA65_RS13065	0.28	-0.3
2,802,392	-		DZA65_RS13065	0.28	-0.3
2,802,392	-		DZA65_RS13065	0.28	-1.3
2,802,392	-		DZA65_RS13065	0.28	-1.1
2,802,392	-		DZA65_RS13065	0.28	-0.2
2,802,415	+		DZA65_RS13065	0.29	-0.6
2,802,415	+		DZA65_RS13065	0.29	-1.3
2,802,415	+		DZA65_RS13065	0.29	-0.1
2,802,416	-		DZA65_RS13065	0.29	-0.3
2,802,478	+		DZA65_RS13065	0.32	-0.3
2,802,478	+		DZA65_RS13065	0.32	-2.1
2,802,478	+		DZA65_RS13065	0.32	-0.6
2,802,479	-		DZA65_RS13065	0.32	-0.5
2,802,479	-		DZA65_RS13065	0.32	+0.8
2,802,479	-		DZA65_RS13065	0.32	+0.7
2,802,559	+		DZA65_RS13065	0.35	+0.3
2,802,560	-		DZA65_RS13065	0.35	-0.5
2,802,610	-		DZA65_RS13065	0.37	+1.5
2,802,610	-		DZA65_RS13065	0.37	-0.9
2,802,610	-		DZA65_RS13065	0.37	+0.8
2,802,610	-		DZA65_RS13065	0.37	-0.2
2,802,610	-		DZA65_RS13065	0.37	-0.5
2,802,676	-		DZA65_RS13065	0.39	+0.3
2,802,689	+		DZA65_RS13065	0.40	-1.9
2,802,689	+				+2.4
2,802,689	+		DZA65_RS13065	0.40	+0.8
2,802,690	-		DZA65_RS13065	0.40	-3.1
2,802,690	-		DZA65_RS13065	0.40	-0.7
2,802,743	+				-1.3
2,802,995	+		DZA65_RS13065	0.51	-0.9
2,802,996	-		DZA65_RS13065	0.51	-2.0
2,803,279	+		DZA65_RS13065	0.62	-0.6
2,803,280	-		DZA65_RS13065	0.62	-0.1
2,803,330	+		DZA65_RS13065	0.63	+1.5
2,803,331	-		DZA65_RS13065	0.63	+1.3
2,803,331	-		DZA65_RS13065	0.63	-2.1
2,803,370	+		DZA65_RS13065	0.65	+0.1
2,803,560	+		DZA65_RS13065	0.72	+0.4
2,803,560	+		DZA65_RS13065	0.72	-0.5
2,803,561	-		DZA65_RS13065	0.72	+1.3
2,803,561	-		DZA65_RS13065	0.72	-2.3
2,803,707	+		DZA65_RS13065	0.78	+0.0
2,803,707	+		DZA65_RS13065	0.78	+0.1
2,803,707	+		DZA65_RS13065	0.78	-0.6
2,803,707	+		DZA65_RS13065	0.78	-0.5
2,803,708	-		DZA65_RS13065	0.78	-1.2
2,803,708	-		DZA65_RS13065	0.78	+2.8
2,803,708	-		DZA65_RS13065	0.78	+0.3
2,803,708	-		DZA65_RS13065	0.78	-1.6
2,803,708	-		DZA65_RS13065	0.78	+0.4
2,803,708	-		DZA65_RS13065	0.78	+1.4
2,803,708	-		DZA65_RS13065	0.78	-0.6
2,803,708	-		DZA65_RS13065	0.78	-0.7
2,803,747	+		DZA65_RS13065	0.79	-0.1
2,803,747	+		DZA65_RS13065	0.79	-0.6
2,803,747	+		DZA65_RS13065	0.79	-0.5
2,803,772	+		DZA65_RS13065	0.80	-1.6
2,803,773	-		DZA65_RS13065	0.80	-0.0
2,803,838	-		DZA65_RS13065	0.82	-0.1
2,803,938	+		DZA65_RS13065	0.86	+0.2
2,804,033	+		DZA65_RS13065	0.90	-0.7
2,804,118	+				-2.3
2,804,119	-				+0.2
2,804,189	+				+1.0
2,804,189	+				+0.7
2,804,189	+				-0.7
2,804,190	-				+0.6
2,804,198	+				-2.1
2,804,198	+				-1.0
2,804,198	+				-2.3
2,804,198	+				-0.5
2,804,199	-				-1.1
2,804,243	-				-0.2
2,804,385	+				+0.8
2,804,386	-				+1.2
2,804,411	-				+1.3
2,804,411	-				-1.0
2,804,444	+				-2.2
2,804,444	+				-1.1
2,804,444	+				+0.9
2,804,444	+				+0.3
2,804,444	+				+0.9
2,804,445	-				+1.3
2,804,445	-				-0.2
2,804,445	-				-1.3
2,804,448	+				-1.7
2,804,448	+				+0.0
2,804,449	-				-0.9
2,804,449	-				-0.2
2,804,460	-				-0.3
2,804,465	+				+0.4
2,804,465	+				+1.0
2,804,465	+				-0.1
2,804,466	-				-2.1
2,804,466	-				-0.1
2,804,470	+				+1.1
2,804,470	+				+0.3
2,804,470	+				+1.6
2,804,470	+				+0.1
2,804,470	+				-1.5
2,804,470	+				-0.0
2,804,470	+				+0.5
2,804,471	-				-0.3
2,804,471	-				+0.1
2,804,471	-				+0.5
2,804,471	-				-0.5
2,804,475	+				-0.1
2,804,475	+				-1.6
2,804,476	-				-0.2
2,804,499	+				+1.9
2,804,520	-				-0.7
2,804,520	-				-0.6
2,804,566	+				-1.3
2,804,566	+				+2.8
2,804,567	-				-1.2
2,804,567	-				+0.8
2,804,567	-				+0.3
2,804,567	-				+1.2
2,804,583	-				+0.6
2,804,641	+				+0.1
2,804,648	-				+1.5
2,804,648	-				+1.1
2,804,684	+				+1.6
2,804,684	+				+1.3
2,804,686	+				-0.7
2,804,686	+				-0.5
2,804,687	-				-1.5
2,804,692	+				+0.0
2,804,692	+				-1.5
2,804,693	-				+0.1
2,804,723	-				+0.1
2,804,740	+				+1.2
2,804,741	-				+0.3
2,804,798	+				+0.3
2,804,798	+				+0.7
2,804,799	-				-1.1
2,804,799	-				-0.9
2,804,802	-				-0.5
2,804,802	-				+0.7
2,804,833	+				-0.3
2,804,833	+				-1.1
2,804,834	-				+0.3
2,804,836	+				+0.9
2,804,836	+				-0.7
2,804,836	+				-0.2
2,804,837	-				-0.1
2,804,837	-				-1.3
2,804,915	+		DZA65_RS13070	0.20	-1.7
2,804,915	+		DZA65_RS13070	0.20	+0.1
2,804,915	+		DZA65_RS13070	0.20	+1.0
2,804,916	-		DZA65_RS13070	0.21	-0.3
2,804,916	-		DZA65_RS13070	0.21	+0.4
2,804,916	-		DZA65_RS13070	0.21	+0.3
2,804,919	+		DZA65_RS13070	0.21	-0.7
2,804,919	+		DZA65_RS13070	0.21	+2.3
2,804,919	+		DZA65_RS13070	0.21	-0.1
2,804,920	-		DZA65_RS13070	0.21	+0.4
2,804,920	-		DZA65_RS13070	0.21	-0.5
2,804,920	-		DZA65_RS13070	0.21	-0.9
2,804,925	+		DZA65_RS13070	0.22	+0.3
2,804,926	-		DZA65_RS13070	0.22	-0.4
2,805,002	+		DZA65_RS13070	0.35	-0.2
2,805,002	+		DZA65_RS13070	0.35	-0.3
2,805,003	-		DZA65_RS13070	0.35	-2.1
2,805,003	-		DZA65_RS13070	0.35	+1.6
2,805,026	+		DZA65_RS13070	0.39	+0.6
2,805,026	+		DZA65_RS13070	0.39	+1.8
2,805,026	+		DZA65_RS13070	0.39	-0.2
2,805,027	-		DZA65_RS13070	0.39	-1.5
2,805,027	-		DZA65_RS13070	0.39	-0.5
2,805,027	-		DZA65_RS13070	0.39	+1.0
2,805,027	-		DZA65_RS13070	0.39	+0.5
2,805,027	-		DZA65_RS13070	0.39	-0.5
2,805,028	+		DZA65_RS13070	0.39	+1.5
2,805,029	-		DZA65_RS13070	0.39	-1.3
2,805,029	-		DZA65_RS13070	0.39	-0.4
2,805,029	-		DZA65_RS13070	0.39	-1.7
2,805,029	-		DZA65_RS13070	0.39	-0.0
2,805,029	-		DZA65_RS13070	0.39	-2.7
2,805,086	+		DZA65_RS13070	0.48	+0.6
2,805,086	+		DZA65_RS13070	0.48	-1.7
2,805,086	+		DZA65_RS13070	0.48	-0.0
2,805,149	+		DZA65_RS13070	0.59	-2.1
2,805,149	+		DZA65_RS13070	0.59	-3.1
2,805,150	-		DZA65_RS13070	0.59	-0.7
2,805,150	-		DZA65_RS13070	0.59	-2.7
2,805,170	+		DZA65_RS13070	0.62	+0.7
2,805,205	-		DZA65_RS13070	0.68	+0.6
2,805,205	-		DZA65_RS13070	0.68	+0.8
2,805,205	-		DZA65_RS13070	0.68	+0.4
2,805,221	+		DZA65_RS13070	0.70	+0.6
2,805,257	+		DZA65_RS13070	0.76	+1.1
2,805,257	+		DZA65_RS13070	0.76	-2.2
2,805,258	-		DZA65_RS13070	0.76	+0.1
2,805,258	-		DZA65_RS13070	0.76	+0.7