Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10815

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
2,286,802	+				+0.5
2,286,832	+				-0.7
2,286,832	+				-1.5
2,286,833	-				-0.8
2,286,833	-				-2.3
2,286,837	+				-1.6
2,286,837	+				-1.7
2,286,838	-				+0.1
2,286,841	-				-0.9
2,286,854	+				-2.5
2,286,884	+				+2.1
2,286,884	+				-1.7
2,286,884	+				-2.2
2,286,885	-				-0.6
2,286,885	-				+0.9
2,286,885	-				-0.7
2,286,885	-				-3.0
2,286,885	-				-2.5
2,286,950	+		DZA65_RS10810	0.15	-1.4
2,286,950	+		DZA65_RS10810	0.15	-1.2
2,286,950	+		DZA65_RS10810	0.15	-2.5
2,286,950	+		DZA65_RS10810	0.15	-1.9
2,286,950	+		DZA65_RS10810	0.15	-1.3
2,286,951	-		DZA65_RS10810	0.15	-0.9
2,286,951	-		DZA65_RS10810	0.15	+0.1
2,286,951	-		DZA65_RS10810	0.15	-2.8
2,286,951	-		DZA65_RS10810	0.15	-1.5
2,286,951	-		DZA65_RS10810	0.15	-0.2
2,286,951	-		DZA65_RS10810	0.15	-0.2
2,287,012	+		DZA65_RS10810	0.22	-0.4
2,287,013	-		DZA65_RS10810	0.22	-0.6
2,287,016	+		DZA65_RS10810	0.22	-2.0
2,287,016	+		DZA65_RS10810	0.22	-1.2
2,287,017	-		DZA65_RS10810	0.22	-1.2
2,287,056	-		DZA65_RS10810	0.27	-0.6
2,287,056	-		DZA65_RS10810	0.27	-2.7
2,287,166	+		DZA65_RS10810	0.40	-2.5
2,287,166	+		DZA65_RS10810	0.40	-2.5
2,287,167	-		DZA65_RS10810	0.40	-1.7
2,287,167	-		DZA65_RS10810	0.40	-0.9
2,287,167	-		DZA65_RS10810	0.40	-1.2
2,287,167	-				-1.5
2,287,184	+		DZA65_RS10810	0.42	-2.1
2,287,184	+		DZA65_RS10810	0.42	-2.9
2,287,184	+		DZA65_RS10810	0.42	+1.1
2,287,184	+		DZA65_RS10810	0.42	-0.9
2,287,185	-		DZA65_RS10810	0.42	-0.9
2,287,185	-		DZA65_RS10810	0.42	-2.2
2,287,185	-		DZA65_RS10810	0.42	-4.0
2,287,196	+		DZA65_RS10810	0.43	-0.5
2,287,352	+		DZA65_RS10810	0.62	-1.2
2,287,503	+		DZA65_RS10810	0.79	-0.6
2,287,503	+		DZA65_RS10810	0.79	-2.3
2,287,553	+		DZA65_RS10810	0.85	-1.0
2,287,553	+		DZA65_RS10810	0.85	-2.9
2,287,553	+		DZA65_RS10810	0.85	-1.9
2,287,554	-		DZA65_RS10810	0.85	-2.9
2,287,554	-		DZA65_RS10810	0.85	-2.2
2,287,554	-		DZA65_RS10810	0.85	-2.2
2,287,554	-		DZA65_RS10810	0.85	-2.0
2,287,589	+		DZA65_RS10810	0.90	-2.9
2,287,590	-		DZA65_RS10810	0.90	-2.0
2,287,702	+				-2.3
2,287,703	-				-0.9
2,287,703	-				-0.9
2,287,745	-				+0.8
2,287,745	-				+0.4
2,287,748	+				-2.5
2,287,748	+				-1.5
2,287,748	+				-0.6
2,287,748	+				-0.9
2,287,749	-				+0.1
2,287,749	-				+0.1
2,287,749	-				-1.2
2,287,754	+				-2.0
2,287,754	+				-2.1
2,287,754	+				-1.2
2,287,755	-				+2.4
2,287,757	+				-2.5
2,287,757	+				-0.8
2,287,758	-				-1.9
2,287,758	-				-1.0
2,287,758	-				+0.7
2,287,758	-				+0.7
2,287,758	-				-0.6
2,287,758	-				-1.6
2,287,758	-				+1.4
2,287,844	+		DZA65_RS10815	0.19	-2.5
2,287,844	+		DZA65_RS10815	0.19	-2.2
2,287,844	+		DZA65_RS10815	0.19	-2.6
2,287,844	+		DZA65_RS10815	0.19	-1.9
2,287,844	+		DZA65_RS10815	0.19	-3.6
2,287,844	+		DZA65_RS10815	0.19	-0.7
2,287,844	+		DZA65_RS10815	0.19	-2.7
2,287,844	+		DZA65_RS10815	0.19	-2.3
2,287,845	-		DZA65_RS10815	0.19	-0.4
2,287,845	-		DZA65_RS10815	0.19	-1.6
2,287,845	-		DZA65_RS10815	0.19	+1.5
2,287,845	-		DZA65_RS10815	0.19	-0.6
2,287,845	-		DZA65_RS10815	0.19	-0.5
2,287,845	-		DZA65_RS10815	0.19	+0.4
2,287,845	-		DZA65_RS10815	0.19	+0.5
2,287,845	-		DZA65_RS10815	0.19	-2.0
2,287,845	-		DZA65_RS10815	0.19	+2.0
2,287,845	-		DZA65_RS10815	0.19	-2.3
2,287,845	-		DZA65_RS10815	0.19	-0.9
2,287,845	-		DZA65_RS10815	0.19	+1.1
2,287,845	-		DZA65_RS10815	0.19	-0.3
2,287,845	-		DZA65_RS10815	0.19	+0.3
2,287,847	+		DZA65_RS10815	0.19	-2.7
2,287,847	+		DZA65_RS10815	0.19	-4.3
2,287,847	+		DZA65_RS10815	0.19	-1.5
2,287,847	+		DZA65_RS10815	0.19	-1.9
2,287,847	+		DZA65_RS10815	0.19	-1.1
2,287,848	-		DZA65_RS10815	0.20	-0.2
2,287,848	-		DZA65_RS10815	0.20	+0.6
2,287,946	+		DZA65_RS10815	0.41	+2.1
2,287,984	+		DZA65_RS10815	0.49	-1.1
2,287,985	-		DZA65_RS10815	0.49	-0.3
2,288,082	-		DZA65_RS10815	0.70	+0.9
2,288,102	+		DZA65_RS10815	0.74	-0.9
2,288,102	+		DZA65_RS10815	0.74	-1.5
2,288,102	+		DZA65_RS10815	0.74	-1.5
2,288,103	-		DZA65_RS10815	0.74	+0.7
2,288,103	-		DZA65_RS10815	0.74	+1.4
2,288,109	+		DZA65_RS10815	0.75	-1.9
2,288,109	+		DZA65_RS10815	0.75	-0.2
2,288,109	+		DZA65_RS10815	0.75	+0.7
2,288,110	-		DZA65_RS10815	0.76	-0.6
2,288,166	-		DZA65_RS10815	0.88	-2.3
2,288,186	+				-1.9
2,288,187	-				+1.4
2,288,226	+				-1.5
2,288,226	+				+1.3
2,288,226	+				-1.0
2,288,227	-				-0.2
2,288,227	-				-1.9
2,288,227	-				+1.6
2,288,248	+				-0.9
2,288,249	-				-1.0
2,288,249	-				-0.2
2,288,254	+				-0.0
2,288,254	+				-1.4
2,288,254	+				-0.9
2,288,258	+				-0.3
2,288,259	-				-1.1
2,288,288	+				-1.7
2,288,288	+				+1.0
2,288,288	+				-1.7
2,288,288	+				-1.3
2,288,288	+				-0.1
2,288,288	+				-0.9
2,288,293	+				+0.7
2,288,294	-				-0.3
2,288,319	+				-0.4
2,288,320	-				-0.5
2,288,336	+				-1.0
2,288,336	+				+0.1
2,288,336	+				-0.6
2,288,336	+				-0.2
2,288,336	+				-0.5
2,288,337	-				+1.3
2,288,340	+				-0.8
2,288,340	+				-0.1
2,288,340	+				-0.0
2,288,340	+				-0.5
2,288,340	+				-0.9
2,288,340	+				+1.5
2,288,340	+				-1.9
2,288,340	+				+0.1
2,288,340	+				+0.1
2,288,340	+				+0.1
2,288,340	+				+2.1
2,288,341	-				+2.0
2,288,341	-				+0.9
2,288,341	-				-0.9
2,288,341	-				+0.1
2,288,341	-				-1.9
2,288,341	-				-0.6
2,288,341	-				-0.2
2,288,341	-				-0.1
2,288,363	+				-0.5
2,288,363	+				-3.6
2,288,363	+				-1.5
2,288,363	+				+0.0
2,288,363	+				+0.1
2,288,363	+				-0.3
2,288,364	-				-0.6
2,288,364	-				+0.8
2,288,364	-				+1.6
2,288,393	+				-3.8
2,288,393	+				+0.6
2,288,393	+				-0.4
2,288,393	+				-0.6
2,288,394	-				+0.7
2,288,397	+				-1.9
2,288,397	+				-0.1
2,288,443	-				-0.4
2,288,531	-		DZA65_RS10820	0.16	-1.6
2,288,531	-		DZA65_RS10820	0.16	-0.4
2,288,631	-		DZA65_RS10820	0.27	-0.3
2,288,631	-		DZA65_RS10820	0.27	-0.9
2,288,660	+		DZA65_RS10820	0.31	+0.1
2,288,660	+		DZA65_RS10820	0.31	+0.1
2,288,660	+		DZA65_RS10820	0.31	+1.4
2,288,660	+		DZA65_RS10820	0.31	+0.2
2,288,661	-		DZA65_RS10820	0.31	+0.1
2,288,661	-		DZA65_RS10820	0.31	+0.2
2,288,661	-		DZA65_RS10820	0.31	-0.3
2,288,661	-		DZA65_RS10820	0.31	+0.4
2,288,661	-		DZA65_RS10820	0.31	-2.5
2,288,661	-		DZA65_RS10820	0.31	+0.0
2,288,661	-		DZA65_RS10820	0.31	+0.1
2,288,672	+		DZA65_RS10820	0.32	-0.3
2,288,672	+		DZA65_RS10820	0.32	-0.8
2,288,676	+		DZA65_RS10820	0.32	+0.3
2,288,676	+		DZA65_RS10820	0.32	+1.1
2,288,676	+		DZA65_RS10820	0.32	+0.9
2,288,676	+		DZA65_RS10820	0.32	+0.1
2,288,677	-		DZA65_RS10820	0.33	+0.5
2,288,677	-		DZA65_RS10820	0.33	+1.0
2,288,677	-		DZA65_RS10820	0.33	-0.2
2,288,685	+		DZA65_RS10820	0.33	-3.0
2,288,685	+		DZA65_RS10820	0.33	-1.0
2,288,685	+		DZA65_RS10820	0.33	-0.5
2,288,685	+		DZA65_RS10820	0.33	-0.9
2,288,685	+		DZA65_RS10820	0.33	-0.6
2,288,685	+		DZA65_RS10820	0.33	-2.2
2,288,686	-		DZA65_RS10820	0.34	+1.5
2,288,686	-		DZA65_RS10820	0.34	+0.3
2,288,707	+		DZA65_RS10820	0.36	-1.7
2,288,707	+		DZA65_RS10820	0.36	-0.4
2,288,708	-		DZA65_RS10820	0.36	+0.6
2,288,768	+		DZA65_RS10820	0.43	-0.8
2,288,768	+		DZA65_RS10820	0.43	-0.5
2,288,768	+		DZA65_RS10820	0.43	-0.7
2,288,768	+		DZA65_RS10820	0.43	-1.7
2,288,768	+		DZA65_RS10820	0.43	-0.7
2,288,768	+		DZA65_RS10820	0.43	-1.0
2,288,768	+		DZA65_RS10820	0.43	+0.5
2,288,769	-		DZA65_RS10820	0.43	+0.5
2,288,769	-		DZA65_RS10820	0.43	-1.9
2,288,769	-		DZA65_RS10820	0.43	+0.5
2,288,769	-				+2.1
2,288,769	-		DZA65_RS10820	0.43	-1.2
2,288,796	+				+0.7
2,288,797	-		DZA65_RS10820	0.46	-0.5
2,288,797	-		DZA65_RS10820	0.46	-0.5
2,288,859	+		DZA65_RS10820	0.53	+0.4
2,288,949	+		DZA65_RS10820	0.63	+0.6
2,288,950	-		DZA65_RS10820	0.63	+0.5
2,288,950	-		DZA65_RS10820	0.63	-0.1
2,289,066	+		DZA65_RS10820	0.76	-0.5
2,289,095	+		DZA65_RS10820	0.79	-3.0
2,289,095	+		DZA65_RS10820	0.79	-0.7
2,289,096	-		DZA65_RS10820	0.79	-0.7
2,289,101	+		DZA65_RS10820	0.80	+0.1
2,289,101	+		DZA65_RS10820	0.80	-2.5
2,289,101	+		DZA65_RS10820	0.80	-0.5
2,289,129	+		DZA65_RS10820	0.83	-1.5
2,289,152	+		DZA65_RS10820	0.85	-0.6
2,289,152	+		DZA65_RS10820	0.85	-0.6
2,289,152	+		DZA65_RS10820	0.85	-1.7
2,289,152	+		DZA65_RS10820	0.85	-1.7
2,289,152	+		DZA65_RS10820	0.85	+0.3
2,289,152	+		DZA65_RS10820	0.85	-0.1
2,289,153	-		DZA65_RS10820	0.85	+0.8
2,289,166	+		DZA65_RS10820	0.87	-1.7
2,289,166	+		DZA65_RS10820	0.87	+0.0
2,289,167	-		DZA65_RS10820	0.87	+0.7
2,289,213	+				-1.2