Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09965

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
2,105,081	-		DZA65_RS09960	0.16	+1.2
2,105,103	+		DZA65_RS09960	0.17	+0.5
2,105,103	+		DZA65_RS09960	0.17	+1.2
2,105,121	+		DZA65_RS09960	0.19	+0.2
2,105,121	+		DZA65_RS09960	0.19	-0.0
2,105,122	-		DZA65_RS09960	0.19	+0.4
2,105,122	-		DZA65_RS09960	0.19	-0.6
2,105,122	-		DZA65_RS09960	0.19	-0.1
2,105,122	-		DZA65_RS09960	0.19	-2.6
2,105,122	-		DZA65_RS09960	0.19	-0.7
2,105,124	+		DZA65_RS09960	0.19	-0.8
2,105,124	+		DZA65_RS09960	0.19	+0.9
2,105,124	+		DZA65_RS09960	0.19	-0.8
2,105,124	+		DZA65_RS09960	0.19	+0.0
2,105,125	-		DZA65_RS09960	0.19	+0.5
2,105,125	-		DZA65_RS09960	0.19	-0.8
2,105,125	-		DZA65_RS09960	0.19	+1.1
2,105,125	-		DZA65_RS09960	0.19	+1.1
2,105,125	-		DZA65_RS09960	0.19	+0.9
2,105,270	+		DZA65_RS09960	0.32	+0.6
2,105,270	+		DZA65_RS09960	0.32	-0.0
2,105,304	+		DZA65_RS09960	0.35	-0.8
2,105,305	-		DZA65_RS09960	0.35	-0.4
2,105,316	+		DZA65_RS09960	0.36	-1.4
2,105,316	+		DZA65_RS09960	0.36	+0.1
2,105,317	-		DZA65_RS09960	0.36	+0.1
2,105,317	-		DZA65_RS09960	0.36	-0.0
2,105,319	+		DZA65_RS09960	0.36	-0.6
2,105,319	+		DZA65_RS09960	0.36	-0.3
2,105,320	-		DZA65_RS09960	0.36	+0.2
2,105,320	-		DZA65_RS09960	0.36	+1.2
2,105,320	-		DZA65_RS09960	0.36	-0.2
2,105,333	-		DZA65_RS09960	0.38	-2.6
2,105,333	-		DZA65_RS09960	0.38	-0.3
2,105,333	-		DZA65_RS09960	0.38	-1.0
2,105,333	-		DZA65_RS09960	0.38	+1.4
2,105,335	+		DZA65_RS09960	0.38	-3.1
2,105,483	+		DZA65_RS09960	0.51	+1.2
2,105,483	+		DZA65_RS09960	0.51	+0.1
2,105,483	+		DZA65_RS09960	0.51	-2.3
2,105,483	+		DZA65_RS09960	0.51	+0.6
2,105,483	+		DZA65_RS09960	0.51	+0.7
2,105,484	-		DZA65_RS09960	0.51	-0.8
2,105,484	-		DZA65_RS09960	0.51	-0.3
2,105,484	-		DZA65_RS09960	0.51	-1.8
2,105,527	+		DZA65_RS09960	0.54	+0.0
2,105,527	+		DZA65_RS09960	0.54	-0.0
2,105,527	+		DZA65_RS09960	0.54	+1.8
2,105,528	-		DZA65_RS09960	0.54	+1.3
2,105,556	+		DZA65_RS09960	0.57	+0.4
2,105,556	+		DZA65_RS09960	0.57	+0.4
2,105,556	+		DZA65_RS09960	0.57	-0.1
2,105,557	-		DZA65_RS09960	0.57	+0.3
2,105,574	+		DZA65_RS09960	0.58	-0.3
2,105,574	+		DZA65_RS09960	0.58	-1.0
2,105,574	+		DZA65_RS09960	0.58	-1.6
2,105,575	-		DZA65_RS09960	0.59	+1.0
2,105,643	-		DZA65_RS09960	0.64	-0.7
2,105,741	+		DZA65_RS09960	0.73	+0.7
2,105,742	-		DZA65_RS09960	0.73	-0.1
2,105,744	-		DZA65_RS09960	0.73	-0.4
2,105,761	-		DZA65_RS09960	0.75	+0.6
2,105,809	+		DZA65_RS09960	0.79	-1.4
2,105,809	+		DZA65_RS09960	0.79	-1.8
2,105,810	-		DZA65_RS09960	0.79	-0.6
2,105,810	-		DZA65_RS09960	0.79	+0.0
2,105,810	-		DZA65_RS09960	0.79	+0.4
2,105,812	-				-1.4
2,105,864	-		DZA65_RS09960	0.84	-1.0
2,105,892	+		DZA65_RS09960	0.86	-1.7
2,105,892	+		DZA65_RS09960	0.86	+0.5
2,105,892	+		DZA65_RS09960	0.86	-1.0
2,105,892	+		DZA65_RS09960	0.86	-0.0
2,105,892	+		DZA65_RS09960	0.86	+0.2
2,105,892	+		DZA65_RS09960	0.86	+0.4
2,105,893	-		DZA65_RS09960	0.86	-2.1
2,105,893	-		DZA65_RS09960	0.86	+0.3
2,105,893	-		DZA65_RS09960	0.86	+0.4
2,105,893	-		DZA65_RS09960	0.86	+0.3
2,105,893	-		DZA65_RS09960	0.86	+0.2
2,105,893	-		DZA65_RS09960	0.86	-0.0
2,105,894	+		DZA65_RS09960	0.86	-2.1
2,105,894	+		DZA65_RS09960	0.86	-1.4
2,105,894	+		DZA65_RS09960	0.86	+0.7
2,105,894	+		DZA65_RS09960	0.86	+0.5
2,105,894	+		DZA65_RS09960	0.86	-3.3
2,105,894	+		DZA65_RS09960	0.86	+0.9
2,105,894	+		DZA65_RS09960	0.86	-0.6
2,105,895	-		DZA65_RS09960	0.86	-0.4
2,105,895	-		DZA65_RS09960	0.86	-0.1
2,105,895	-		DZA65_RS09960	0.86	-0.0
2,105,895	-		DZA65_RS09960	0.86	-0.4
2,105,895	-		DZA65_RS09960	0.86	+1.4
2,105,946	+				-0.6
2,105,946	+				-0.8
2,105,946	+				+0.4
2,105,946	+				-1.0
2,105,946	+				-1.4
2,105,947	-				+2.1
2,105,947	-				-1.1
2,105,959	+				+1.2
2,105,959	+				-0.7
2,105,959	+				-1.7
2,105,959	+				+0.2
2,105,959	+				+0.5
2,105,960	-				+0.3
2,105,960	-				-0.7
2,105,968	+				-0.5
2,105,995	-				-0.6
2,106,004	+				-0.8
2,106,004	+				-0.8
2,106,005	-				+0.9
2,106,005	-				+0.2
2,106,005	-				-0.2
2,106,005	-				+1.2
2,106,126	+				+0.4
2,106,126	+				-0.6
2,106,127	-				+2.0
2,106,127	-				-0.4
2,106,261	-		DZA65_RS09965	0.20	+0.1
2,106,297	+		DZA65_RS09965	0.24	+1.0
2,106,298	-		DZA65_RS09965	0.24	+0.2
2,106,308	-		DZA65_RS09965	0.25	-0.3
2,106,309	+		DZA65_RS09965	0.25	+0.8
2,106,309	+		DZA65_RS09965	0.25	-0.6
2,106,309	+		DZA65_RS09965	0.25	+1.2
2,106,309	+		DZA65_RS09965	0.25	+0.3
2,106,309	+		DZA65_RS09965	0.25	-0.4
2,106,309	+		DZA65_RS09965	0.25	-1.1
2,106,309	+		DZA65_RS09965	0.25	+1.3
2,106,309	+		DZA65_RS09965	0.25	+1.8
2,106,309	+		DZA65_RS09965	0.25	+1.3
2,106,309	+		DZA65_RS09965	0.25	+0.0
2,106,309	+				+0.6
2,106,309	+		DZA65_RS09965	0.25	-0.2
2,106,309	+		DZA65_RS09965	0.25	-0.8
2,106,309	+		DZA65_RS09965	0.25	-0.2
2,106,310	-		DZA65_RS09965	0.25	-2.1
2,106,310	-		DZA65_RS09965	0.25	+1.8
2,106,310	-		DZA65_RS09965	0.25	-1.1
2,106,310	-		DZA65_RS09965	0.25	-0.2
2,106,310	-		DZA65_RS09965	0.25	-0.4
2,106,310	-		DZA65_RS09965	0.25	+0.6
2,106,310	-		DZA65_RS09965	0.25	-0.4
2,106,310	-		DZA65_RS09965	0.25	+0.2
2,106,310	-		DZA65_RS09965	0.25	-0.1
2,106,310	-		DZA65_RS09965	0.25	-1.8
2,106,310	-		DZA65_RS09965	0.25	-0.1
2,106,310	-		DZA65_RS09965	0.25	+1.3
2,106,310	-		DZA65_RS09965	0.25	-1.4
2,106,387	+		DZA65_RS09965	0.33	+0.2
2,106,387	+		DZA65_RS09965	0.33	+0.3
2,106,388	-		DZA65_RS09965	0.34	+0.5
2,106,477	-		DZA65_RS09965	0.43	+0.2
2,106,517	-		DZA65_RS09965	0.47	-1.2
2,106,651	+		DZA65_RS09965	0.62	-0.4
2,106,690	+		DZA65_RS09965	0.66	+0.9
2,106,694	-		DZA65_RS09965	0.66	-1.4
2,106,798	-		DZA65_RS09965	0.78	-1.8
2,106,862	+		DZA65_RS09965	0.85	+0.0
2,106,887	+		DZA65_RS09965	0.87	-0.1
2,106,888	-		DZA65_RS09965	0.87	+0.6
2,106,895	+		DZA65_RS09965	0.88	-0.4
2,106,895	+		DZA65_RS09965	0.88	-0.0
2,106,895	+		DZA65_RS09965	0.88	+0.3
2,106,896	-		DZA65_RS09965	0.88	-0.6
2,106,898	+		DZA65_RS09965	0.88	+0.3
2,106,967	+				+0.5
2,106,994	-				+0.1
2,107,006	-				+0.6
2,107,026	-				-1.6
2,107,026	-				+1.3
2,107,026	-				+0.2
2,107,034	-				+0.6
2,107,041	+				+0.2
2,107,042	-				+0.2
2,107,064	-				-1.6
2,107,072	+				-0.1
2,107,072	+				+0.1
2,107,084	-				-0.5
2,107,084	-				-0.2
2,107,084	-				+0.5
2,107,108	+				-0.5
2,107,120	-				+0.4
2,107,120	-				-1.4
2,107,129	+				-0.2
2,107,129	+				-0.2
2,107,129	+				+0.4
2,107,129	+				-0.0
2,107,130	-				-0.8
2,107,130	-				-2.2
2,107,139	+				+0.2
2,107,139	+				+1.3
2,107,188	+				-2.0
2,107,194	+				-1.1
2,107,194	+				-0.6
2,107,195	-				-2.2
2,107,203	+				+0.9
2,107,204	-				-1.0
2,107,205	+				-0.4
2,107,205	+				+0.1
2,107,205	+				-1.3
2,107,205	+				+0.5
2,107,205	+				+0.1
2,107,205	+				-0.8
2,107,205	+				+0.2
2,107,205	+				+0.4
2,107,205	+				+0.4
2,107,205	+				+1.0
2,107,205	+				-0.4
2,107,205	+				+1.2
2,107,205	+				+1.0
2,107,205	+				-0.2
2,107,205	+				+1.8
2,107,206	-				-0.2
2,107,206	-				-0.4
2,107,206	-				-0.1
2,107,206	-				+0.2
2,107,206	-				-0.0
2,107,206	-				-1.4
2,107,206	-				-0.1
2,107,206	-				+0.5
2,107,206	-				+0.2
2,107,206	-				-1.2
2,107,218	+				-0.3
2,107,219	-				-0.5
2,107,275	+				+0.8
2,107,275	+				+0.4
2,107,292	-				+0.2
2,107,302	+				+0.6
2,107,302	+				-2.6
2,107,302	+				-0.0
2,107,307	+				-0.1
2,107,308	-				+0.2
2,107,318	+				-0.1
2,107,318	+				-0.8
2,107,318	+				+0.8
2,107,318	+				-1.6
2,107,319	-				+0.8
2,107,323	+				-0.6
2,107,324	-				-0.4
2,107,324	-				-3.3
2,107,360	+				+0.2
2,107,360	+				-0.8
2,107,360	+				-0.2
2,107,360	+				+0.2
2,107,360	+				+0.5
2,107,360	+				-1.2
2,107,361	-				-0.8
2,107,361	-				-0.2
2,107,361	-				-2.3
2,107,361	-				-1.1
2,107,361	-				-1.2
2,107,361	-				+0.9
2,107,361	-				-0.3
2,107,361	-				-1.2
2,107,361	-				+0.7
2,107,361	-				+0.4
2,107,361	-				+0.6
2,107,386	+				-0.6
2,107,386	+				+1.3
2,107,387	-				-1.2
2,107,387	-				+1.2
2,107,387	-				+0.6
2,107,387	-				-0.3
2,107,387	-				+0.2
2,107,387	-				+0.9
2,107,387	-				+0.5
2,107,413	+				-0.2
2,107,414	-				+0.7
2,107,419	+				+1.7
2,107,419	+				-0.8
2,107,420	-				+0.2
2,107,420	-				+0.9
2,107,480	+				+0.2
2,107,480	+				+1.2
2,107,480	+				-0.8
2,107,480	+				+0.5
2,107,480	+				+1.0
2,107,480	+				-1.2
2,107,480	+				+2.2
2,107,481	-				-0.6
2,107,481	-				+1.2
2,107,481	-				-0.4
2,107,607	+				-0.6
2,107,607	+				+0.2
2,107,607	+				+0.2
2,107,607	+				+0.5
2,107,607	+				+2.0
2,107,607	+				-0.1
2,107,608	-				-1.1
2,107,608	-				+0.7
2,107,608	-				+0.2
2,107,608	-				-0.2
2,107,608	-				-0.8
2,107,608	-				-0.6
2,107,608	-				+1.4
2,107,608	-				+0.2
2,107,638	+				-0.7
2,107,639	-				+0.4
2,107,639	-				-0.8
2,107,694	+		DZA65_RS09970	0.12	-1.0
2,107,694	+		DZA65_RS09970	0.12	-1.4
2,107,694	+		DZA65_RS09970	0.12	+2.0
2,107,694	+		DZA65_RS09970	0.12	+0.2
2,107,695	-		DZA65_RS09970	0.12	-0.4
2,107,695	-		DZA65_RS09970	0.12	-1.1
2,107,695	-		DZA65_RS09970	0.12	+1.8
2,107,841	+		DZA65_RS09970	0.32	+0.4
2,107,842	-		DZA65_RS09970	0.32	-2.4
2,107,842	-		DZA65_RS09970	0.32	-1.1
2,107,842	-		DZA65_RS09970	0.32	-0.5
2,107,842	-		DZA65_RS09970	0.32	+0.2
2,107,896	+		DZA65_RS09970	0.40	-1.4
2,107,897	-		DZA65_RS09970	0.40	+0.2
2,107,962	+		DZA65_RS09970	0.48	-1.4
2,107,963	-		DZA65_RS09970	0.49	-0.6