Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08750

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
1,851,590	-				-0.6
1,851,618	+				-0.3
1,851,644	+				-0.3
1,851,680	-		DZA65_RS08745	0.11	+0.5
1,851,681	+		DZA65_RS08745	0.11	+1.2
1,851,681	+		DZA65_RS08745	0.11	+0.1
1,851,682	-		DZA65_RS08745	0.11	-0.1
1,851,683	+		DZA65_RS08745	0.11	-1.0
1,851,683	+		DZA65_RS08745	0.11	-2.0
1,851,683	+		DZA65_RS08745	0.11	+0.0
1,851,683	+		DZA65_RS08745	0.11	+1.0
1,851,684	-		DZA65_RS08745	0.11	-2.0
1,851,732	-		DZA65_RS08745	0.19	+0.7
1,851,732	-		DZA65_RS08745	0.19	-1.3
1,851,761	-		DZA65_RS08745	0.24	-1.5
1,851,779	-		DZA65_RS08745	0.27	+0.5
1,851,854	-		DZA65_RS08745	0.40	-1.5
1,851,854	-		DZA65_RS08745	0.40	-0.0
1,852,010	+		DZA65_RS08745	0.66	-0.5
1,852,011	-		DZA65_RS08745	0.67	-0.5
1,852,011	-		DZA65_RS08745	0.67	-0.1
1,852,034	+		DZA65_RS08745	0.71	+1.5
1,852,039	+		DZA65_RS08745	0.71	+2.3
1,852,044	+		DZA65_RS08745	0.72	+0.7
1,852,097	-		DZA65_RS08745	0.81	-0.5
1,852,136	-		DZA65_RS08745	0.88	+0.1
1,852,225	-				+2.0
1,852,235	-				+0.6
1,852,253	+				+1.7
1,852,302	+				+0.9
1,852,435	+				-1.1
1,852,435	+				-0.4
1,852,435	+				+0.6
1,852,435	+				+0.7
1,852,435	+				-0.3
1,852,436	-				-0.7
1,852,436	-				-0.2
1,852,436	-				+0.5
1,852,436	-				-2.3
1,852,437	+				-0.7
1,852,437	+				-0.5
1,852,437	+				-1.0
1,852,437	+				-0.3
1,852,437	+				-0.0
1,852,437	+				-0.5
1,852,437	+				-1.4
1,852,437	+				-0.8
1,852,437	+				+0.7
1,852,437	+				-1.7
1,852,437	+				-1.0
1,852,437	+				-1.3
1,852,437	+				-1.5
1,852,438	-				+0.2
1,852,438	-				+1.7
1,852,438	-				-0.1
1,852,438	-				+0.3
1,852,438	-				+0.6
1,852,438	-				-0.3
1,852,438	-				+2.1
1,852,438	-				-2.5
1,852,438	-				-0.4
1,852,438	-				-0.1
1,852,438	-				+0.9
1,852,438	-				-1.7
1,852,438	-				-0.5
1,852,472	+				+0.5
1,852,484	+				+0.4
1,852,485	-				-0.2
1,852,562	-				+1.2
1,852,562	-				-1.3
1,852,583	-				-0.7
1,852,612	-				+0.6
1,852,616	-				+0.6
1,852,668	+		DZA65_RS08750	0.24	+0.8
1,852,721	+		DZA65_RS08750	0.40	+2.4
1,852,750	+		DZA65_RS08750	0.49	+0.6
1,852,750	+		DZA65_RS08750	0.49	+1.0
1,852,847	+		DZA65_RS08750	0.78	+0.8
1,852,866	+		DZA65_RS08750	0.83	-0.5
1,852,866	+		DZA65_RS08750	0.83	-0.3
1,852,867	-		DZA65_RS08750	0.84	+1.1
1,852,867	-		DZA65_RS08750	0.84	+1.7
1,852,872	-		DZA65_RS08750	0.85	-1.0
1,852,926	+				+0.9
1,852,926	+				-1.1
1,852,966	-		DZA65_RS08755	0.10	-1.2
1,852,978	+		DZA65_RS08755	0.14	+0.6
1,853,014	+		DZA65_RS08755	0.24	-0.3
1,853,015	-		DZA65_RS08755	0.25	-2.3
1,853,015	-		DZA65_RS08755	0.25	-0.7
1,853,022	+		DZA65_RS08755	0.27	+0.0
1,853,023	-		DZA65_RS08755	0.27	+0.9
1,853,023	-		DZA65_RS08755	0.27	-1.7
1,853,023	-		DZA65_RS08755	0.27	+0.4
1,853,023	-		DZA65_RS08755	0.27	-0.3
1,853,023	-		DZA65_RS08755	0.27	+0.7
1,853,023	-		DZA65_RS08755	0.27	-1.3
1,853,024	+		DZA65_RS08755	0.27	+0.3
1,853,025	-		DZA65_RS08755	0.28	-0.1
1,853,025	-		DZA65_RS08755	0.28	+1.0
1,853,025	-		DZA65_RS08755	0.28	-2.0
1,853,025	-		DZA65_RS08755	0.28	+1.5
1,853,037	+		DZA65_RS08755	0.31	-1.4
1,853,120	-		DZA65_RS08755	0.56	-0.9
1,853,142	+		DZA65_RS08755	0.62	+0.1
1,853,142	+		DZA65_RS08755	0.62	+0.8
1,853,147	-		DZA65_RS08755	0.64	-0.0
1,853,215	+		DZA65_RS08755	0.84	-0.1
1,853,218	+		DZA65_RS08755	0.85	-0.1
1,853,218	+		DZA65_RS08755	0.85	-1.5
1,853,218	+		DZA65_RS08755	0.85	+0.6
1,853,219	-		DZA65_RS08755	0.85	+0.4
1,853,232	-		DZA65_RS08755	0.89	+0.0
1,853,285	+				-0.4
1,853,288	+				+0.4
1,853,289	-				-1.0
1,853,292	+				+0.3
1,853,292	+				-0.2
1,853,293	-				-0.7
1,853,293	-				+0.3
1,853,293	-				+0.0
1,853,299	+				+0.1
1,853,299	+				+0.3
1,853,299	+				-0.0
1,853,300	-				+2.1
1,853,301	+				+0.1
1,853,301	+				+0.3
1,853,301	+				+3.1
1,853,302	-				+1.6
1,853,316	+				-0.6
1,853,326	+				+0.7
1,853,326	+				-0.4
1,853,326	+				+0.5
1,853,326	+				-0.7
1,853,326	+				+0.9
1,853,326	+				+0.3
1,853,326	+				-0.5
1,853,327	-				-0.6
1,853,364	+				-1.0
1,853,367	+				-0.9
1,853,422	+				-0.6
1,853,423	-				+3.4
1,853,452	+				-1.0
1,853,453	-				+1.3
1,853,511	+				-0.0
1,853,512	-				-0.0
1,853,537	+				+1.0
1,853,538	-				+0.6
1,853,565	+				+0.7
1,853,565	+				+0.5
1,853,618	+		DZA65_RS08760	0.10	-0.3
1,853,618	+		DZA65_RS08760	0.10	-1.3
1,853,618	+		DZA65_RS08760	0.10	-1.2
1,853,618	+		DZA65_RS08760	0.10	-2.0
1,853,619	-		DZA65_RS08760	0.10	-0.1
1,853,619	-		DZA65_RS08760	0.10	-0.1
1,853,619	-		DZA65_RS08760	0.10	+0.1
1,853,619	-		DZA65_RS08760	0.10	-2.4
1,853,619	-		DZA65_RS08760	0.10	+0.5
1,853,619	-		DZA65_RS08760	0.10	-1.2
1,853,654	-		DZA65_RS08760	0.14	-0.7
1,853,654	-		DZA65_RS08760	0.14	+0.7
1,853,693	+		DZA65_RS08760	0.19	+1.3
1,853,693	+		DZA65_RS08760	0.19	+1.5
1,853,693	+		DZA65_RS08760	0.19	-0.1
1,853,693	+		DZA65_RS08760	0.19	+0.5
1,853,693	+		DZA65_RS08760	0.19	-1.9
1,853,693	+		DZA65_RS08760	0.19	-0.7
1,853,693	+		DZA65_RS08760	0.19	+0.7
1,853,693	+		DZA65_RS08760	0.19	+0.3
1,853,693	+				-0.7
1,853,694	-		DZA65_RS08760	0.19	-1.0
1,853,694	-		DZA65_RS08760	0.19	-0.8
1,853,714	+		DZA65_RS08760	0.21	-1.0
1,853,714	+		DZA65_RS08760	0.21	+0.9
1,853,778	+		DZA65_RS08760	0.29	-1.0
1,853,778	+				-1.3
1,853,779	-		DZA65_RS08760	0.29	-1.0
1,853,814	+		DZA65_RS08760	0.33	-1.3
1,853,814	+		DZA65_RS08760	0.33	+0.5
1,853,814	+		DZA65_RS08760	0.33	-0.2
1,853,815	-		DZA65_RS08760	0.33	+0.6
1,853,825	-		DZA65_RS08760	0.34	-0.0
1,853,825	-		DZA65_RS08760	0.34	-1.0
1,853,825	-		DZA65_RS08760	0.34	-0.3