Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08010

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
1,670,301	-				-0.8
1,670,309	+				-0.4
1,670,311	+				+0.1
1,670,339	+				-0.1
1,670,365	+				+0.3
1,670,376	+				+0.3
1,670,417	+				+0.1
1,670,417	+				+1.8
1,670,454	+		DZA65_RS08005	0.13	+0.8
1,670,477	+		DZA65_RS08005	0.16	+0.5
1,670,478	-		DZA65_RS08005	0.16	+0.6
1,670,551	+		DZA65_RS08005	0.24	-0.2
1,670,551	+		DZA65_RS08005	0.24	+0.5
1,670,551	+		DZA65_RS08005	0.24	+0.3
1,670,552	-		DZA65_RS08005	0.25	+0.6
1,670,552	-		DZA65_RS08005	0.25	-0.4
1,670,552	-		DZA65_RS08005	0.25	+0.4
1,670,553	+		DZA65_RS08005	0.25	+0.4
1,670,559	+		DZA65_RS08005	0.25	-0.6
1,670,683	+		DZA65_RS08005	0.40	-0.2
1,670,684	-		DZA65_RS08005	0.40	+0.3
1,670,712	+		DZA65_RS08005	0.43	+0.7
1,670,758	+		DZA65_RS08005	0.48	+0.4
1,670,771	+		DZA65_RS08005	0.50	+0.7
1,670,776	+		DZA65_RS08005	0.50	+0.7
1,670,776	+		DZA65_RS08005	0.50	+1.0
1,670,777	-		DZA65_RS08005	0.50	+0.3
1,670,778	+		DZA65_RS08005	0.50	+0.3
1,670,778	+		DZA65_RS08005	0.50	+0.1
1,670,780	+		DZA65_RS08005	0.51	-1.7
1,670,780	+		DZA65_RS08005	0.51	-0.4
1,670,780	+		DZA65_RS08005	0.51	-1.3
1,670,780	+		DZA65_RS08005	0.51	-1.3
1,670,780	+		DZA65_RS08005	0.51	-0.7
1,670,780	+		DZA65_RS08005	0.51	+1.2
1,670,781	-		DZA65_RS08005	0.51	-0.7
1,670,781	-		DZA65_RS08005	0.51	-0.4
1,670,781	-		DZA65_RS08005	0.51	+1.1
1,670,857	-		DZA65_RS08005	0.59	+0.9
1,670,881	-		DZA65_RS08005	0.62	-0.4
1,670,941	-		DZA65_RS08005	0.69	-0.7
1,670,983	+		DZA65_RS08005	0.74	+0.2
1,671,034	-		DZA65_RS08005	0.80	-0.4
1,671,107	+		DZA65_RS08005	0.88	-0.1
1,671,120	+		DZA65_RS08005	0.90	-2.3
1,671,151	+				-0.1
1,671,152	-				-1.1
1,671,483	+		DZA65_RS08010	0.22	+1.2
1,671,483	+		DZA65_RS08010	0.22	-1.1
1,671,486	+		DZA65_RS08010	0.22	+0.9
1,671,486	+		DZA65_RS08010	0.22	-1.0
1,671,655	+		DZA65_RS08010	0.36	-3.0
1,671,655	+		DZA65_RS08010	0.36	-0.7
1,671,658	+		DZA65_RS08010	0.36	+0.7
1,671,658	+		DZA65_RS08010	0.36	+0.3
1,671,666	+		DZA65_RS08010	0.37	-1.0
1,671,819	+		DZA65_RS08010	0.49	+0.3
1,671,849	+		DZA65_RS08010	0.52	-0.3
1,671,855	-		DZA65_RS08010	0.52	-1.7
1,671,873	+		DZA65_RS08010	0.53	+0.7
1,671,873	+		DZA65_RS08010	0.53	+1.0
1,672,006	+		DZA65_RS08010	0.64	-1.0
1,672,006	+		DZA65_RS08010	0.64	-1.5
1,672,150	+		DZA65_RS08010	0.76	-0.5
1,672,192	+		DZA65_RS08010	0.79	-0.5
1,672,192	+				-1.3
1,672,193	-		DZA65_RS08010	0.80	-1.0
1,672,243	+				+1.3
1,672,487	+				-0.2
1,672,522	+				-0.1
1,672,523	-				+0.9
1,672,523	-				+1.0
1,672,523	-				-0.8
1,672,523	-				-1.3
1,672,523	-				-1.0
1,672,539	+				-0.3
1,672,540	-				-0.1
1,672,540	-				-0.7
1,672,552	+				+1.6
1,672,553	-				+0.0
1,672,561	+				-0.7
1,672,562	-				-1.1
1,672,562	-				-0.5
1,672,591	-				+1.2
1,672,683	-				-0.3
1,672,686	-				-0.9
1,672,714	+				-0.4
1,672,715	-				-0.2
1,672,736	-				+0.1
1,672,854	+				-0.2
1,672,855	-				+0.2
1,672,855	-				+3.4
1,672,856	+				+0.6
1,672,856	+				+0.3
1,672,856	+				+0.9
1,672,856	+				-0.4
1,672,856	+				+0.7
1,672,856	+				-0.5
1,672,856	+				-0.7
1,672,856	+				-0.8
1,672,856	+				+0.0
1,672,856	+				-2.5
1,672,856	+				+0.9
1,672,856	+				-1.1
1,672,856	+				-2.5
1,672,856	+				-0.6
1,672,856	+				+0.4
1,672,856	+				+1.2
1,672,856	+				-1.1
1,672,857	-				+0.0
1,672,857	-				-0.4
1,672,857	-				-0.5
1,672,857	-				+0.3
1,672,857	-				+2.0
1,672,857	-				+0.3
1,672,857	-				+2.1
1,672,857	-				+0.1
1,672,857	-				-0.9
1,672,857	-				+0.4
1,672,857	-				+0.6
1,672,857	-				+0.2
1,672,857	-				+0.7
1,672,857	-				+0.1
1,672,857	-				+1.1
1,672,857	-				+1.2
1,672,858	+				-2.0
1,672,858	+				-1.9
1,672,858	+				+0.0
1,672,858	+				-0.3
1,672,858	+				-0.5
1,672,858	+				+1.9
1,672,858	+				+1.0
1,672,858	+				-0.6
1,672,858	+				-0.9
1,672,858	+				-0.7
1,672,859	-				-0.0
1,672,859	-				+0.9
1,672,859	-				+0.8
1,672,859	-				+0.9
1,672,859	-				-0.7
1,672,859	-				-2.5
1,672,859	-				-0.3
1,672,859	-				+0.1
1,672,878	+				+0.5
1,672,879	-				+0.2
1,672,898	-				+1.4
1,672,920	-				-0.7
1,672,954	+				+0.9
1,672,954	+				-2.2
1,672,957	+				-0.9
1,672,957	+				-0.9
1,672,966	+				-0.8
1,672,966	+				-0.4
1,672,967	-				+0.1
1,672,967	-				+1.8
1,672,967	-				-1.2
1,672,977	-				-1.2
1,673,095	+		DZA65_RS08015	0.12	+0.9
1,673,095	+		DZA65_RS08015	0.12	-2.5
1,673,096	-		DZA65_RS08015	0.12	+0.3
1,673,096	-		DZA65_RS08015	0.12	+0.1
1,673,096	-		DZA65_RS08015	0.12	+0.7
1,673,096	-		DZA65_RS08015	0.12	-0.7
1,673,096	-		DZA65_RS08015	0.12	-1.7
1,673,102	+		DZA65_RS08015	0.13	+0.2
1,673,103	-		DZA65_RS08015	0.13	-1.2
1,673,103	-		DZA65_RS08015	0.13	-0.7
1,673,195	-		DZA65_RS08015	0.23	+0.5
1,673,195	-		DZA65_RS08015	0.23	-0.7
1,673,227	+		DZA65_RS08015	0.27	+1.2
1,673,227	+		DZA65_RS08015	0.27	-0.3
1,673,228	-		DZA65_RS08015	0.27	-0.4
1,673,228	-		DZA65_RS08015	0.27	-0.0
1,673,403	+		DZA65_RS08015	0.48	+1.3
1,673,403	+		DZA65_RS08015	0.48	+0.1
1,673,404	-		DZA65_RS08015	0.48	-0.9
1,673,404	-		DZA65_RS08015	0.48	+0.5
1,673,404	-		DZA65_RS08015	0.48	+0.0
1,673,404	-		DZA65_RS08015	0.48	-2.9