Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07495

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
1,557,027	-		DZA65_RS07490	0.15	-2.3
1,557,121	+		DZA65_RS07490	0.24	+0.6
1,557,132	+		DZA65_RS07490	0.25	+0.1
1,557,132	+		DZA65_RS07490	0.25	-0.5
1,557,133	-		DZA65_RS07490	0.25	-0.8
1,557,133	-		DZA65_RS07490	0.25	+1.6
1,557,170	-		DZA65_RS07490	0.28	-1.3
1,557,170	-		DZA65_RS07490	0.28	+0.3
1,557,170	-		DZA65_RS07490	0.28	-2.0
1,557,200	+		DZA65_RS07490	0.31	-1.0
1,557,200	+		DZA65_RS07490	0.31	-0.5
1,557,200	+		DZA65_RS07490	0.31	-1.0
1,557,201	-		DZA65_RS07490	0.31	+0.5
1,557,201	-		DZA65_RS07490	0.31	-0.3
1,557,223	+		DZA65_RS07490	0.33	-1.4
1,557,223	+		DZA65_RS07490	0.33	+0.6
1,557,224	-		DZA65_RS07490	0.33	+0.0
1,557,224	-		DZA65_RS07490	0.33	+0.3
1,557,224	-		DZA65_RS07490	0.33	+0.3
1,557,224	-		DZA65_RS07490	0.33	+0.2
1,557,254	+		DZA65_RS07490	0.35	-1.7
1,557,254	+		DZA65_RS07490	0.35	+1.0
1,557,255	-		DZA65_RS07490	0.36	+0.2
1,557,255	-		DZA65_RS07490	0.36	+0.6
1,557,291	+		DZA65_RS07490	0.39	-1.7
1,557,292	-		DZA65_RS07490	0.39	+0.1
1,557,336	-		DZA65_RS07490	0.43	+0.3
1,557,352	-		DZA65_RS07490	0.44	+0.7
1,557,427	-		DZA65_RS07490	0.51	-0.4
1,557,477	+		DZA65_RS07490	0.56	-0.9
1,557,521	+		DZA65_RS07490	0.60	+0.6
1,557,522	-		DZA65_RS07490	0.60	-2.4
1,557,532	+		DZA65_RS07490	0.61	-0.3
1,557,533	-		DZA65_RS07490	0.61	-1.2
1,557,533	-		DZA65_RS07490	0.61	+1.1
1,557,533	-		DZA65_RS07490	0.61	+3.1
1,557,606	+		DZA65_RS07490	0.67	-0.9
1,557,616	+		DZA65_RS07490	0.68	-0.6
1,557,617	-		DZA65_RS07490	0.68	-0.7
1,557,705	+		DZA65_RS07490	0.76	-0.2
1,557,705	+		DZA65_RS07490	0.76	-2.0
1,557,706	-		DZA65_RS07490	0.76	-1.3
1,557,706	-		DZA65_RS07490	0.76	-0.3
1,557,713	+		DZA65_RS07490	0.77	-1.3
1,557,727	+		DZA65_RS07490	0.78	-1.8
1,557,815	-		DZA65_RS07490	0.86	+0.6
1,557,830	-		DZA65_RS07490	0.87	-1.1
1,557,852	-		DZA65_RS07490	0.89	+0.3
1,557,852	-		DZA65_RS07490	0.89	-0.0
1,557,963	+				-2.3
1,557,963	+				+0.5
1,557,963	+				+0.3
1,557,963	+				-0.9
1,557,963	+				+1.1
1,557,963	+				-0.0
1,557,963	+				-0.4
1,557,963	+				+0.3
1,557,963	+				+0.0
1,557,963	+				-1.7
1,557,964	-				-0.9
1,557,964	-				-0.7
1,557,964	-				+1.1
1,557,964	-				-2.7
1,557,964	-				-1.7
1,557,964	-				-0.5
1,557,964	-				+1.8
1,557,964	-				+0.3
1,557,964	-				+0.6
1,557,964	-				-0.0
1,557,964	-				-0.2
1,557,964	-				-2.0
1,557,964	-				+0.5
1,557,964	-				-1.4
1,557,964	-				-1.3
1,557,964	-				-0.5
1,557,965	+				-0.1
1,557,965	+				-1.3
1,557,965	+				-0.5
1,557,965	+				-0.4
1,557,966	-				-0.4
1,557,966	-				+0.3
1,557,966	-				+1.1
1,557,966	-				-0.7
1,557,966	-				-0.4
1,558,016	-				-1.3
1,558,172	+		DZA65_RS07495	0.19	+1.3
1,558,175	+		DZA65_RS07495	0.19	+0.5
1,558,176	-		DZA65_RS07495	0.19	-0.1
1,558,176	-		DZA65_RS07495	0.19	+0.1
1,558,201	+		DZA65_RS07495	0.21	-0.1
1,558,201	+		DZA65_RS07495	0.21	+1.3
1,558,209	-		DZA65_RS07495	0.22	+0.9
1,558,341	+		DZA65_RS07495	0.34	+0.3
1,558,341	+				+0.9
1,558,341	+		DZA65_RS07495	0.34	-0.8
1,558,341	+		DZA65_RS07495	0.34	+1.2
1,558,341	+		DZA65_RS07495	0.34	-2.5
1,558,341	+		DZA65_RS07495	0.34	-0.7
1,558,342	-		DZA65_RS07495	0.34	-1.3
1,558,342	-		DZA65_RS07495	0.34	+0.8
1,558,342	-		DZA65_RS07495	0.34	+0.3
1,558,342	-		DZA65_RS07495	0.34	+1.3
1,558,342	-		DZA65_RS07495	0.34	+1.0
1,558,342	-		DZA65_RS07495	0.34	-0.8
1,558,342	-		DZA65_RS07495	0.34	-0.5
1,558,342	-		DZA65_RS07495	0.34	+1.2
1,558,342	-		DZA65_RS07495	0.34	+0.0
1,558,355	-		DZA65_RS07495	0.35	-1.1
1,558,386	+		DZA65_RS07495	0.38	-2.0
1,558,386	+		DZA65_RS07495	0.38	+0.6
1,558,386	+		DZA65_RS07495	0.38	-0.8
1,558,386	+		DZA65_RS07495	0.38	+0.3
1,558,387	-		DZA65_RS07495	0.38	-0.6
1,558,387	-		DZA65_RS07495	0.38	+0.3
1,558,387	-		DZA65_RS07495	0.38	+1.7
1,558,387	-		DZA65_RS07495	0.38	-0.6
1,558,387	-		DZA65_RS07495	0.38	+0.3
1,558,387	-		DZA65_RS07495	0.38	-0.5
1,558,387	-		DZA65_RS07495	0.38	+0.3
1,558,387	-		DZA65_RS07495	0.38	-0.1
1,558,442	-		DZA65_RS07495	0.43	+0.1
1,558,442	-		DZA65_RS07495	0.43	+0.7
1,558,460	+		DZA65_RS07495	0.45	+0.3
1,558,460	+		DZA65_RS07495	0.45	-1.7
1,558,460	+		DZA65_RS07495	0.45	+0.6
1,558,461	-		DZA65_RS07495	0.45	+0.7
1,558,461	-		DZA65_RS07495	0.45	-0.1
1,558,466	-		DZA65_RS07495	0.45	-0.4
1,558,509	-		DZA65_RS07495	0.49	+0.5
1,558,509	-		DZA65_RS07495	0.49	-0.6
1,558,563	+		DZA65_RS07495	0.54	-0.7
1,558,563	+		DZA65_RS07495	0.54	+0.8
1,558,564	-		DZA65_RS07495	0.54	-0.3
1,558,564	-		DZA65_RS07495	0.54	-0.5
1,558,590	-		DZA65_RS07495	0.57	+0.6
1,558,620	+		DZA65_RS07495	0.59	+0.1
1,558,620	+		DZA65_RS07495	0.59	+0.3
1,558,620	+		DZA65_RS07495	0.59	+0.3
1,558,620	+		DZA65_RS07495	0.59	+1.8
1,558,620	+		DZA65_RS07495	0.59	+0.6
1,558,620	+		DZA65_RS07495	0.59	-0.7
1,558,620	+		DZA65_RS07495	0.59	+0.5
1,558,620	+		DZA65_RS07495	0.59	-1.7
1,558,620	+		DZA65_RS07495	0.59	-1.4
1,558,620	+		DZA65_RS07495	0.59	+0.5
1,558,621	-		DZA65_RS07495	0.59	-1.5
1,558,621	-		DZA65_RS07495	0.59	+0.0
1,558,621	-		DZA65_RS07495	0.59	-0.7
1,558,621	-		DZA65_RS07495	0.59	-1.5
1,558,622	+		DZA65_RS07495	0.60	-1.8
1,558,622	+		DZA65_RS07495	0.60	+0.4
1,558,622	+		DZA65_RS07495	0.60	+2.6
1,558,622	+		DZA65_RS07495	0.60	-0.9
1,558,622	+		DZA65_RS07495	0.60	+4.3
1,558,622	+		DZA65_RS07495	0.60	+0.0
1,558,622	+		DZA65_RS07495	0.60	+0.5
1,558,623	-		DZA65_RS07495	0.60	-1.3
1,558,623	-		DZA65_RS07495	0.60	+0.2
1,558,623	-		DZA65_RS07495	0.60	-0.6
1,558,623	-		DZA65_RS07495	0.60	-1.3
1,558,623	-		DZA65_RS07495	0.60	+0.5
1,558,623	-		DZA65_RS07495	0.60	+0.7
1,558,623	-		DZA65_RS07495	0.60	+0.6
1,558,623	-		DZA65_RS07495	0.60	-0.7
1,558,623	-		DZA65_RS07495	0.60	+1.3
1,558,623	-		DZA65_RS07495	0.60	+0.1
1,558,623	-		DZA65_RS07495	0.60	+0.3
1,558,671	+		DZA65_RS07495	0.64	+2.5
1,558,674	-		DZA65_RS07495	0.64	-0.5
1,558,715	-		DZA65_RS07495	0.68	+1.3
1,558,833	+		DZA65_RS07495	0.79	+0.3
1,558,833	+		DZA65_RS07495	0.79	+0.7
1,558,860	+		DZA65_RS07495	0.81	+2.3
1,558,860	+		DZA65_RS07495	0.81	+2.5
1,558,860	+		DZA65_RS07495	0.81	-1.5
1,558,860	+		DZA65_RS07495	0.81	-1.3
1,558,860	+		DZA65_RS07495	0.81	+0.7
1,558,861	-				+1.9
1,558,861	-		DZA65_RS07495	0.81	-1.0
1,558,861	-		DZA65_RS07495	0.81	-0.3
1,558,861	-		DZA65_RS07495	0.81	-0.1
1,558,861	-		DZA65_RS07495	0.81	-1.4
1,558,861	-		DZA65_RS07495	0.81	+0.2
1,558,861	-		DZA65_RS07495	0.81	-0.4
1,558,861	-		DZA65_RS07495	0.81	+0.3
1,558,861	-		DZA65_RS07495	0.81	-0.2
1,558,961	-				+0.5
1,558,977	-				-0.3
1,558,977	-				-0.6
1,558,984	-				+0.2
1,558,984	-				-0.1
1,558,984	-				+0.2
1,559,036	-				-0.4
1,559,064	+				-0.7
1,559,064	+				+0.5
1,559,064	+				-0.7
1,559,064	+				+0.2
1,559,064	+				-2.3
1,559,064	+				-0.1
1,559,064	+				+0.2
1,559,064	+				+1.6
1,559,065	-				+0.3
1,559,065	-				-2.0
1,559,094	+				-0.5
1,559,094	+				+1.3
1,559,097	+				+1.4
1,559,097	+				-0.1
1,559,097	+				+0.3
1,559,097	+				-0.9
1,559,097	+				-0.2
1,559,097	+				+0.3
1,559,097	+				-2.3
1,559,097	+				-0.2
1,559,097	+				-0.1
1,559,098	-				-0.4
1,559,098	-				-0.7
1,559,098	-				+0.3
1,559,149	+				+1.4
1,559,187	-		DZA65_RS07500	0.13	-0.9
1,559,206	+		DZA65_RS07500	0.15	+0.5
1,559,207	-		DZA65_RS07500	0.15	+1.2
1,559,207	-		DZA65_RS07500	0.15	-0.9
1,559,207	-		DZA65_RS07500	0.15	-1.5
1,559,207	-		DZA65_RS07500	0.15	-0.4
1,559,254	+		DZA65_RS07500	0.19	+0.8
1,559,258	+		DZA65_RS07500	0.20	-0.3
1,559,285	+		DZA65_RS07500	0.22	-2.3
1,559,286	-		DZA65_RS07500	0.23	-0.2
1,559,286	-		DZA65_RS07500	0.23	+0.4
1,559,334	-		DZA65_RS07500	0.27	+0.3
1,559,424	+		DZA65_RS07500	0.36	-0.2
1,559,456	-		DZA65_RS07500	0.39	-0.7
1,559,456	-		DZA65_RS07500	0.39	+0.3
1,559,529	+		DZA65_RS07500	0.46	-0.7
1,559,529	+		DZA65_RS07500	0.46	-0.9
1,559,569	-		DZA65_RS07500	0.50	-1.1
1,559,785	-		DZA65_RS07500	0.71	-1.7
1,559,803	-		DZA65_RS07500	0.73	-1.1
1,559,815	-		DZA65_RS07500	0.74	+0.3
1,559,815	-		DZA65_RS07500	0.74	-0.8
1,559,846	+		DZA65_RS07500	0.77	-1.7
1,559,847	-		DZA65_RS07500	0.78	-0.6
1,559,847	-		DZA65_RS07500	0.78	-1.4
1,559,847	-		DZA65_RS07500	0.78	+0.3
1,559,847	-		DZA65_RS07500	0.78	+0.0
1,559,847	-		DZA65_RS07500	0.78	-0.1
1,559,896	+		DZA65_RS07500	0.82	+1.5
1,559,921	-		DZA65_RS07500	0.85	+1.1
1,559,941	-		DZA65_RS07500	0.87	-0.2
1,559,941	-		DZA65_RS07500	0.87	-0.1
1,559,944	+		DZA65_RS07500	0.87	-0.5
1,559,944	+		DZA65_RS07500	0.87	-0.2
1,559,944	+		DZA65_RS07500	0.87	+0.7
1,559,944	+		DZA65_RS07500	0.87	-0.1
1,559,945	-		DZA65_RS07500	0.87	+2.3
1,560,003	+				-1.5
1,560,004	-				-0.2
1,560,004	-				+0.1
1,560,007	-				+0.8
1,560,025	-				-1.7
1,560,041	-				+1.0