Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22605

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,885,486	+		DZA65_RS22595	0.79	-0.1
4,885,486	+		DZA65_RS22595	0.79	-1.2
4,885,486	+				+0.2
4,885,486	+				+0.2
4,885,487	-		DZA65_RS22595	0.79	-1.4
4,885,487	-		DZA65_RS22595	0.79	-0.6
4,885,487	-		DZA65_RS22595	0.79	-1.3
4,885,569	+				+0.6
4,885,569	+				-0.4
4,885,569	+				-0.4
4,885,569	+				+0.8
4,885,569	+				-1.0
4,885,569	+				-0.8
4,885,570	-				-1.0
4,885,570	-				+0.4
4,885,570	-				+1.2
4,885,570	-				+0.6
4,885,570	-				-0.6
4,885,570	-				+0.3
4,885,640	+				-0.8
4,885,640	+				+0.6
4,885,640	+				-0.8
4,885,641	-				-1.2
4,885,684	+				+0.4
4,885,736	+				+0.7
4,885,736	+				-0.8
4,885,736	+				+0.6
4,885,763	+				+0.0
4,885,775	-				+0.4
4,885,778	+				+0.4
4,885,778	+				-1.4
4,885,779	-				-1.2
4,885,779	-				-0.6
4,885,797	+				-0.2
4,885,797	+				-1.9
4,885,797	+				+1.2
4,885,797	+				-1.4
4,885,797	+				-0.8
4,885,797	+				+0.1
4,885,798	-				+0.9
4,885,798	-				+3.0
4,885,798	-				+0.3
4,885,798	-				-1.5
4,885,798	-				+0.7
4,885,853	+				-1.2
4,885,853	+				+3.0
4,885,853	+				-2.8
4,885,854	-				+0.4
4,885,854	-				+0.6
4,885,854	-				-0.8
4,885,854	-				-2.0
4,886,053	+		DZA65_RS22600	0.21	-0.7
4,886,053	+		DZA65_RS22600	0.21	+0.0
4,886,053	+		DZA65_RS22600	0.21	-0.3
4,886,054	-		DZA65_RS22600	0.22	+0.3
4,886,097	+		DZA65_RS22600	0.30	+0.6
4,886,097	+		DZA65_RS22600	0.30	-0.0
4,886,097	+		DZA65_RS22600	0.30	+0.9
4,886,097	+		DZA65_RS22600	0.30	+0.5
4,886,097	+		DZA65_RS22600	0.30	+0.2
4,886,097	+		DZA65_RS22600	0.30	+0.3
4,886,098	-		DZA65_RS22600	0.30	+0.2
4,886,098	-		DZA65_RS22600	0.30	+0.0
4,886,185	+		DZA65_RS22600	0.46	+0.4
4,886,185	+		DZA65_RS22600	0.46	+0.9
4,886,185	+		DZA65_RS22600	0.46	-1.4
4,886,185	+		DZA65_RS22600	0.46	-1.2
4,886,185	+		DZA65_RS22600	0.46	-0.8
4,886,185	+		DZA65_RS22600	0.46	-0.2
4,886,185	+		DZA65_RS22600	0.46	+0.9
4,886,186	-		DZA65_RS22600	0.46	-0.2
4,886,186	-		DZA65_RS22600	0.46	+3.8
4,886,186	-		DZA65_RS22600	0.46	+0.3
4,886,186	-		DZA65_RS22600	0.46	+0.3
4,886,186	-		DZA65_RS22600	0.46	-0.5
4,886,186	-		DZA65_RS22600	0.46	-0.3
4,886,186	-		DZA65_RS22600	0.46	-0.8
4,886,186	-		DZA65_RS22600	0.46	+0.4
4,886,186	-		DZA65_RS22600	0.46	+0.3
4,886,188	+		DZA65_RS22600	0.47	+1.2
4,886,189	-		DZA65_RS22600	0.47	+0.2
4,886,189	-		DZA65_RS22600	0.47	+0.7
4,886,208	+		DZA65_RS22600	0.50	-0.4
4,886,208	+		DZA65_RS22600	0.50	-1.1
4,886,208	+		DZA65_RS22600	0.50	+1.0
4,886,208	+		DZA65_RS22600	0.50	-0.7
4,886,209	-		DZA65_RS22600	0.51	+1.2
4,886,209	-		DZA65_RS22600	0.51	-1.0
4,886,209	-		DZA65_RS22600	0.51	-0.2
4,886,241	+		DZA65_RS22600	0.57	+1.4
4,886,241	+		DZA65_RS22600	0.57	-0.5
4,886,241	+		DZA65_RS22600	0.57	+0.3
4,886,241	+		DZA65_RS22600	0.57	+0.2
4,886,241	+		DZA65_RS22600	0.57	+0.8
4,886,242	-		DZA65_RS22600	0.57	+1.0
4,886,242	-		DZA65_RS22600	0.57	-0.3
4,886,242	-		DZA65_RS22600	0.57	+0.6
4,886,308	+		DZA65_RS22600	0.69	-1.8
4,886,308	+		DZA65_RS22600	0.69	-1.4
4,886,309	-		DZA65_RS22600	0.69	+0.0
4,886,309	-		DZA65_RS22600	0.69	-0.0
4,886,309	-		DZA65_RS22600	0.69	-1.3
4,886,334	+		DZA65_RS22600	0.74	+0.2
4,886,334	+		DZA65_RS22600	0.74	+0.8
4,886,338	+		DZA65_RS22600	0.75	+0.2
4,886,339	-		DZA65_RS22600	0.75	-0.1
4,886,339	-		DZA65_RS22600	0.75	-0.3
4,886,343	+		DZA65_RS22600	0.76	-0.1
4,886,344	-		DZA65_RS22600	0.76	-1.0
4,886,344	-		DZA65_RS22600	0.76	-1.3
4,886,516	+				+1.0
4,886,516	+				-0.1
4,886,516	+				-0.8
4,886,517	-				-0.4
4,886,517	-				-0.3
4,886,517	-				-0.4
4,886,517	-				+0.0
4,886,517	-				+0.2
4,886,517	-				-0.4
4,886,517	-				+0.2
4,886,538	-				+0.5
4,886,696	+		DZA65_RS22605	0.11	-2.5
4,886,696	+		DZA65_RS22605	0.11	+1.2
4,886,871	+		DZA65_RS22605	0.20	-0.0
4,886,871	+		DZA65_RS22605	0.20	-1.3
4,886,871	+		DZA65_RS22605	0.20	-0.6
4,886,871	+		DZA65_RS22605	0.20	+1.7
4,886,871	+		DZA65_RS22605	0.20	-0.1
4,886,871	+		DZA65_RS22605	0.20	-0.1
4,886,871	+		DZA65_RS22605	0.20	+0.4
4,886,871	+		DZA65_RS22605	0.20	-0.3
4,886,872	-		DZA65_RS22605	0.20	+0.2
4,886,872	-		DZA65_RS22605	0.20	-0.9
4,886,872	-		DZA65_RS22605	0.20	-0.8
4,886,872	-		DZA65_RS22605	0.20	-1.0
4,886,953	-		DZA65_RS22605	0.24	+0.2
4,886,953	-				+0.6
4,886,996	-		DZA65_RS22605	0.26	-0.4
4,886,996	-		DZA65_RS22605	0.26	-1.4
4,887,103	+		DZA65_RS22605	0.32	-0.1
4,887,103	+		DZA65_RS22605	0.32	-0.8
4,887,103	+		DZA65_RS22605	0.32	-1.8
4,887,103	+		DZA65_RS22605	0.32	-0.7
4,887,103	+		DZA65_RS22605	0.32	+0.3
4,887,103	+		DZA65_RS22605	0.32	+0.8
4,887,104	-		DZA65_RS22605	0.32	+0.8
4,887,104	-		DZA65_RS22605	0.32	+1.2
4,887,104	-		DZA65_RS22605	0.32	+0.3
4,887,104	-		DZA65_RS22605	0.32	+0.3
4,887,104	-		DZA65_RS22605	0.32	+0.6
4,887,104	-		DZA65_RS22605	0.32	+0.4
4,887,104	-		DZA65_RS22605	0.32	+2.0
4,887,104	-		DZA65_RS22605	0.32	-1.2
4,887,104	-		DZA65_RS22605	0.32	-0.2
4,887,104	-		DZA65_RS22605	0.32	-1.2
4,887,104	-		DZA65_RS22605	0.32	+0.9
4,887,175	+		DZA65_RS22605	0.35	+0.5
4,887,176	-		DZA65_RS22605	0.35	-0.0
4,887,223	+		DZA65_RS22605	0.38	-0.7
4,887,224	-		DZA65_RS22605	0.38	-0.8
4,887,243	+		DZA65_RS22605	0.39	+1.9
4,887,243	+		DZA65_RS22605	0.39	+0.2
4,887,243	+		DZA65_RS22605	0.39	-0.9
4,887,244	-		DZA65_RS22605	0.39	-0.4
4,887,244	-		DZA65_RS22605	0.39	+1.6
4,887,244	-		DZA65_RS22605	0.39	-0.3
4,887,244	-		DZA65_RS22605	0.39	+0.6
4,887,244	-		DZA65_RS22605	0.39	-0.6
4,887,299	+		DZA65_RS22605	0.41	-0.8
4,887,299	+		DZA65_RS22605	0.41	-0.8
4,887,299	+		DZA65_RS22605	0.41	-0.4
4,887,300	-		DZA65_RS22605	0.41	-0.4
4,887,302	+		DZA65_RS22605	0.42	-0.8
4,887,302	+		DZA65_RS22605	0.42	+2.2
4,887,302	+		DZA65_RS22605	0.42	+0.6
4,887,303	-		DZA65_RS22605	0.42	+0.4
4,887,303	-		DZA65_RS22605	0.42	-0.4
4,887,303	-		DZA65_RS22605	0.42	+1.0
4,887,303	-		DZA65_RS22605	0.42	-1.8
4,887,303	-		DZA65_RS22605	0.42	-0.3
4,887,303	-		DZA65_RS22605	0.42	-0.8
4,887,303	-		DZA65_RS22605	0.42	-2.1
4,887,303	-		DZA65_RS22605	0.42	-1.7
4,887,333	+		DZA65_RS22605	0.43	-1.7
4,887,333	+		DZA65_RS22605	0.43	-1.7
4,887,333	+		DZA65_RS22605	0.43	+1.2
4,887,334	-		DZA65_RS22605	0.43	-0.7
4,887,438	+		DZA65_RS22605	0.48	+1.6
4,887,438	+		DZA65_RS22605	0.48	+0.2
4,887,439	-		DZA65_RS22605	0.48	+0.2
4,887,515	+		DZA65_RS22605	0.52	-0.2
4,887,573	-		DZA65_RS22605	0.55	-0.9
4,887,573	-		DZA65_RS22605	0.55	-0.4
4,887,573	-		DZA65_RS22605	0.55	-1.0
4,887,573	-		DZA65_RS22605	0.55	+0.7
4,887,574	+		DZA65_RS22605	0.55	+1.7
4,887,574	+		DZA65_RS22605	0.55	+0.3
4,887,574	+		DZA65_RS22605	0.55	+0.2
4,887,574	+		DZA65_RS22605	0.55	+0.5
4,887,574	+		DZA65_RS22605	0.55	-2.9
4,887,574	+		DZA65_RS22605	0.55	-0.0
4,887,574	+		DZA65_RS22605	0.55	-1.7
4,887,574	+		DZA65_RS22605	0.55	-0.3
4,887,574	+		DZA65_RS22605	0.55	-0.4
4,887,574	+		DZA65_RS22605	0.55	+0.2
4,887,575	-		DZA65_RS22605	0.55	+1.5
4,887,575	-		DZA65_RS22605	0.55	-0.3
4,887,575	-		DZA65_RS22605	0.55	-0.1
4,887,575	-		DZA65_RS22605	0.55	+0.2
4,887,575	-		DZA65_RS22605	0.55	-0.7
4,887,575	-		DZA65_RS22605	0.55	-0.8
4,887,575	-		DZA65_RS22605	0.55	-0.2
4,887,575	-		DZA65_RS22605	0.55	-0.2
4,887,575	-		DZA65_RS22605	0.55	+2.4
4,887,575	-		DZA65_RS22605	0.55	+0.4
4,887,608	-		DZA65_RS22605	0.57	+0.5
4,887,758	+		DZA65_RS22605	0.64	-0.8
4,887,758	+		DZA65_RS22605	0.64	+0.3
4,887,758	+		DZA65_RS22605	0.64	-0.4
4,887,758	+		DZA65_RS22605	0.64	+0.8
4,887,758	+		DZA65_RS22605	0.64	-0.5
4,887,758	+		DZA65_RS22605	0.64	+0.1
4,887,758	+		DZA65_RS22605	0.64	-0.4
4,887,758	+		DZA65_RS22605	0.64	-1.5
4,887,758	+		DZA65_RS22605	0.64	+0.5
4,887,759	-		DZA65_RS22605	0.64	-1.2
4,887,759	-		DZA65_RS22605	0.64	-0.2
4,887,759	-		DZA65_RS22605	0.64	-1.3
4,887,759	-		DZA65_RS22605	0.64	-1.1
4,887,759	-		DZA65_RS22605	0.64	+0.5
4,887,759	-		DZA65_RS22605	0.64	-0.5
4,887,759	-		DZA65_RS22605	0.64	-0.0
4,887,856	+		DZA65_RS22605	0.69	-0.7
4,887,856	+		DZA65_RS22605	0.69	-0.1
4,887,856	+		DZA65_RS22605	0.69	+0.1
4,887,856	+		DZA65_RS22605	0.69	+0.6
4,887,856	+		DZA65_RS22605	0.69	+0.6
4,887,856	+		DZA65_RS22605	0.69	+0.9
4,887,856	+		DZA65_RS22605	0.69	-1.4
4,887,856	+		DZA65_RS22605	0.69	+0.9
4,887,857	-		DZA65_RS22605	0.69	+0.1
4,887,857	-		DZA65_RS22605	0.69	-0.7
4,887,857	-		DZA65_RS22605	0.69	-1.1
4,887,857	-		DZA65_RS22605	0.69	-0.8
4,887,857	-		DZA65_RS22605	0.69	-0.8
4,887,857	-		DZA65_RS22605	0.69	-0.5
4,887,857	-		DZA65_RS22605	0.69	-0.4
4,887,857	-		DZA65_RS22605	0.69	+0.5
4,887,857	-		DZA65_RS22605	0.69	+0.2
4,887,872	+		DZA65_RS22605	0.70	+1.0
4,887,872	+		DZA65_RS22605	0.70	-0.6
4,887,872	+		DZA65_RS22605	0.70	-0.5
4,887,872	+		DZA65_RS22605	0.70	-2.4
4,887,872	+		DZA65_RS22605	0.70	-0.8
4,887,873	-		DZA65_RS22605	0.70	+0.0
4,887,873	-		DZA65_RS22605	0.70	+0.0
4,887,926	+		DZA65_RS22605	0.73	-1.7
4,887,951	+		DZA65_RS22605	0.74	-1.7
4,887,951	+		DZA65_RS22605	0.74	-1.3
4,887,951	+		DZA65_RS22605	0.74	-0.1
4,887,951	+		DZA65_RS22605	0.74	-1.2
4,887,952	-		DZA65_RS22605	0.74	+1.4
4,887,966	-		DZA65_RS22605	0.75	+0.9
4,888,053	+		DZA65_RS22605	0.79	-0.2
4,888,167	-		DZA65_RS22605	0.85	+0.4
4,888,202	+		DZA65_RS22605	0.86	+0.6
4,888,203	-		DZA65_RS22605	0.87	-0.4
4,888,272	+				+0.2
4,888,272	+				+0.7
4,888,272	+				-1.8
4,888,272	+				-0.1
4,888,272	+				-0.7
4,888,272	+				-1.4
4,888,272	+				+0.8
4,888,273	-				+0.2
4,888,273	-				+0.9
4,888,273	-				-0.1
4,888,273	-				+0.3
4,888,273	-				+0.2
4,888,436	+				-0.4
4,888,437	-				-0.3
4,888,472	+				+0.8
4,888,472	+				-1.7
4,888,472	+				-0.2
4,888,489	+				+0.3
4,888,489	+				+0.2
4,888,489	+				+0.2
4,888,489	+				-1.4
4,888,489	+				-0.6
4,888,489	+				-0.0
4,888,489	+				+0.1
4,888,489	+				+0.8
4,888,489	+				-0.4
4,888,489	+				+2.2
4,888,489	+				-0.7
4,888,489	+				+0.9
4,888,489	+				-0.5
4,888,489	+				-1.4
4,888,489	+				+0.2
4,888,489	+				-0.3
4,888,489	+				-1.0
4,888,489	+				+0.1
4,888,489	+				-2.5
4,888,489	+				-1.2
4,888,489	+				-0.7
4,888,489	+				-0.4
4,888,490	-				+0.8
4,888,490	-				-0.9
4,888,490	-				-0.2
4,888,490	-				-1.0
4,888,490	-				-1.4
4,888,490	-				-1.7
4,888,490	-				-0.8
4,888,490	-				+0.2
4,888,490	-				-0.6
4,888,490	-				-0.4
4,888,490	-				+1.0
4,888,490	-				-0.1
4,888,490	-				+0.3
4,888,490	-				-1.7
4,888,490	-				+0.5
4,888,490	-				+1.2
4,888,490	-				-0.7
4,888,490	-				-0.9
4,888,490	-				+0.2
4,888,490	-				+0.4
4,888,506	+				-0.0
4,888,506	+				+0.2
4,888,507	-				+3.2
4,888,542	-				+0.2
4,888,566	+				-0.9
4,888,593	+				-1.7
4,888,594	-				-0.3
4,888,616	+				-1.0
4,888,616	+				-0.2
4,888,616	+				-1.2
4,888,616	+				-0.1
4,888,617	-				-2.2
4,888,617	-				+0.2
4,888,617	-				+1.3
4,888,617	-				+0.6
4,888,617	-				-0.4
4,888,667	+				+0.6
4,888,668	-				-1.0
4,888,668	-				-1.2
4,888,695	+				-0.7
4,888,695	+				-0.1
4,888,696	-				-0.8
4,888,696	-				+0.3
4,888,735	+				+0.2
4,888,735	+				-0.2
4,888,735	+				+0.3
4,888,735	+				-1.3
4,888,736	-				-0.9
4,888,736	-				+0.0
4,888,736	-				+0.3
4,888,751	-				-0.7
4,888,780	+				-1.8
4,888,780	+				-0.8
4,888,780	+				+1.2
4,888,780	+				+1.7
4,888,780	+				+0.2
4,888,781	-				-0.2
4,888,781	-				-0.3
4,888,781	-				-0.4
4,888,781	-				-1.8
4,888,789	+				+0.5
4,888,789	+				+1.2
4,888,789	+				+1.2
4,888,828	-				-0.7
4,888,845	+				-0.8
4,888,862	+				+1.8
4,888,863	-				+0.4
4,888,863	-				-1.0
4,888,863	-				+0.7
4,888,863	-				+0.3
4,888,866	+				+0.0
4,888,867	-				-0.7
4,888,867	-				+1.2
4,888,878	+				+2.0
4,888,878	+				-0.3
4,888,878	+				+1.3
4,888,879	-				-0.4
4,888,881	+				-0.4
4,888,882	-				+1.6
4,888,890	+				-0.4
4,888,904	+				-0.8
4,888,904	+				+0.9
4,888,904	+				-0.6
4,888,904	+				+0.3
4,888,904	+				-0.5
4,888,904	+				+0.4
4,888,904	+				-1.4
4,888,904	+				-0.2
4,888,904	+				+1.0
4,888,904	+				+0.8
4,888,904	+				+0.2
4,888,905	-				+1.7
4,888,905	-				-1.0
4,888,905	-				-0.3
4,888,905	-				+0.4
4,888,905	-				+0.4
4,888,905	-				+0.2
4,888,905	-				-0.4
4,888,905	-				-0.0
4,888,905	-				+0.3
4,888,905	-				-0.1
4,888,909	-				+2.2
4,888,909	-				-0.2
4,888,909	-				-0.8
4,888,909	-				-0.7
4,888,909	-				+0.2
4,888,911	-				-1.0
4,888,920	-				-1.7
4,888,920	-				-0.4
4,888,920	-				+0.6
4,888,920	-				+0.9
4,889,044	+				+1.2
4,889,044	+				-2.5
4,889,045	-				+0.0
4,889,046	+				+0.3
4,889,046	+				-0.4
4,889,046	+				+2.2
4,889,046	+				-0.4
4,889,046	+				+0.7
4,889,046	+				+0.2
4,889,046	+				+1.8
4,889,046	+				-1.3
4,889,046	+				-0.2
4,889,046	+				-0.8
4,889,046	+				-2.2
4,889,046	+				-0.4
4,889,046	+				+0.4
4,889,046	+				+0.1
4,889,046	+				-0.4
4,889,046	+				-2.2
4,889,046	+				+1.7
4,889,046	+				+0.2
4,889,046	+				+0.7
4,889,047	-				-1.0
4,889,047	-				+2.5
4,889,047	-				-0.2
4,889,047	-				-0.5
4,889,047	-				-0.6
4,889,047	-				-1.7
4,889,047	-				+2.2
4,889,047	-				-1.0
4,889,047	-				+0.3
4,889,067	+				-1.1
4,889,068	-				+0.2
4,889,100	+				+1.2
4,889,100	+				-0.2
4,889,101	-				-0.4
4,889,101	-				-1.4
4,889,102	+				+0.7
4,889,102	+				+0.1
4,889,102	+				+0.4
4,889,102	+				-0.8
4,889,102	+				-0.2
4,889,103	-				-0.4
4,889,103	-				+0.4
4,889,118	+				+0.1
4,889,119	-				+0.2
4,889,146	-				-0.7
4,889,200	-				-1.8
4,889,200	-				-1.1
4,889,201	+				-0.8
4,889,201	+				-1.7
4,889,212	+				+0.1
4,889,212	+				-0.3
4,889,213	-				+1.0
4,889,213	-				-2.5
4,889,227	+				-1.7
4,889,227	+				-0.0
4,889,227	+				+0.4
4,889,228	-				-0.7
4,889,228	-				-1.5
4,889,228	-				-1.7
4,889,228	-				-0.8
4,889,237	+				+0.1
4,889,249	+				+2.6
4,889,250	-				-0.0
4,889,256	-				-0.8
4,889,263	+				+0.6
4,889,263	+				-0.3
4,889,263	+				+0.5
4,889,281	-				-1.4
4,889,308	+				-1.0
4,889,309	-				+0.8
4,889,309	-				+0.8
4,889,329	+				-0.8
4,889,398	+				+0.1
4,889,442	+				-1.3
4,889,463	+				-0.8
4,889,463	+				-1.4
4,889,463	+				-0.4
4,889,463	+				+0.2
4,889,463	+				+0.2
4,889,464	-				-1.8
4,889,464	-				+0.2
4,889,464	-				+0.1
4,889,464	-				-1.8
4,889,464	-				-0.5