Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21815

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,713,826	-		DZA65_RS21805	0.48	-0.4
4,713,919	+		DZA65_RS21805	0.56	+0.3
4,713,919	+		DZA65_RS21805	0.56	-0.8
4,713,919	+		DZA65_RS21805	0.56	+0.9
4,713,920	-		DZA65_RS21805	0.56	+1.8
4,713,920	-		DZA65_RS21805	0.56	+0.2
4,713,920	-		DZA65_RS21805	0.56	+0.2
4,713,961	+		DZA65_RS21805	0.59	-0.6
4,713,998	+		DZA65_RS21805	0.62	-1.2
4,713,999	-		DZA65_RS21805	0.62	-0.1
4,713,999	-		DZA65_RS21805	0.62	+0.6
4,713,999	-		DZA65_RS21805	0.62	+0.0
4,714,244	+		DZA65_RS21805	0.83	-1.4
4,714,245	-		DZA65_RS21805	0.83	+1.9
4,714,252	+		DZA65_RS21805	0.83	+0.2
4,714,252	+		DZA65_RS21805	0.83	-0.2
4,714,253	-		DZA65_RS21805	0.83	-0.0
4,714,312	+		DZA65_RS21805	0.88	-0.8
4,714,312	+		DZA65_RS21805	0.88	+0.6
4,714,312	+		DZA65_RS21805	0.88	-0.8
4,714,312	+		DZA65_RS21805	0.88	-0.1
4,714,313	-		DZA65_RS21805	0.88	-0.4
4,714,313	-		DZA65_RS21805	0.88	-0.2
4,714,313	-		DZA65_RS21805	0.88	-1.2
4,714,313	-		DZA65_RS21805	0.88	+1.7
4,714,313	-		DZA65_RS21805	0.88	-0.8
4,714,313	-		DZA65_RS21805	0.88	+1.6
4,714,313	-		DZA65_RS21805	0.88	-1.7
4,714,351	+				-1.7
4,714,351	+				-0.7
4,714,352	-				+0.9
4,714,364	+				-1.3
4,714,364	+				-0.5
4,714,364	+				+0.8
4,714,365	-				-1.5
4,714,365	-				+1.3
4,714,401	+				-0.3
4,714,401	+				+0.2
4,714,402	-				-0.7
4,714,402	-				+0.2
4,714,421	+				+0.1
4,714,422	-				+0.8
4,714,431	-				-0.4
4,714,431	-				+2.3
4,714,525	+				+0.2
4,714,525	+				-0.1
4,714,525	+				-0.1
4,714,525	+				+0.0
4,714,525	+				+2.0
4,714,525	+				-0.3
4,714,526	-				+0.0
4,714,526	-				+0.8
4,714,526	-				+0.8
4,714,526	-				-0.5
4,714,526	-				-1.7
4,714,527	+				-1.2
4,714,527	+				+0.0
4,714,527	+				+0.3
4,714,527	+				-0.2
4,714,527	+				+0.5
4,714,527	+				+0.8
4,714,527	+				+0.2
4,714,527	+				-1.7
4,714,527	+				-0.5
4,714,527	+				-0.8
4,714,527	+				-0.4
4,714,527	+				-0.8
4,714,527	+				-1.2
4,714,527	+				+1.9
4,714,527	+				-1.2
4,714,527	+				+2.2
4,714,527	+				-0.8
4,714,528	-				+1.2
4,714,528	-				+0.2
4,714,528	-				+1.5
4,714,528	-				-0.8
4,714,528	-				-0.3
4,714,528	-				+0.4
4,714,528	-				+1.2
4,714,528	-				+1.2
4,714,528	-				+0.5
4,714,528	-				+0.7
4,714,528	-				-1.0
4,714,528	-				-0.2
4,714,528	-				+2.2
4,714,529	+				+0.7
4,714,529	+				+0.3
4,714,529	+				-1.7
4,714,529	+				+0.3
4,714,529	+				-0.4
4,714,529	+				+0.3
4,714,529	+				-1.8
4,714,530	-				+1.7
4,714,530	-				-0.6
4,714,539	-				+1.2
4,714,586	-				+0.3
4,714,586	-				+1.2
4,714,594	-				-1.7
4,714,594	-				+0.5
4,714,594	-				+0.7
4,714,641	+				+1.2
4,714,641	+				-1.2
4,714,641	+				-0.3
4,714,641	+				-1.8
4,714,641	+				+0.6
4,714,641	+				+0.4
4,714,641	+				+1.3
4,714,641	+				-0.2
4,714,641	+				+0.0
4,714,641	+				+0.7
4,714,641	+				+0.7
4,714,642	-				+0.0
4,714,642	-				+0.4
4,714,642	-				+0.5
4,714,642	-				+2.0
4,714,642	-				+0.6
4,714,642	-				-0.8
4,714,651	-				-0.4
4,714,652	+				-0.2
4,714,652	+				-2.3
4,714,652	+				-0.2
4,714,652	+				+1.2
4,714,652	+				+1.5
4,714,652	+				+0.6
4,714,652	+				-0.3
4,714,728	+				+0.6
4,714,728	+				-1.4
4,714,728	+				-1.0
4,714,728	+				-0.3
4,714,728	+				-0.6
4,714,728	+				-0.3
4,714,728	+				-0.4
4,714,728	+				-1.4
4,714,728	+				-0.8
4,714,728	+				-0.2
4,714,728	+				-0.8
4,714,728	+				-0.8
4,714,728	+				-3.4
4,714,728	+				+1.2
4,714,728	+				-0.8
4,714,728	+				-0.4
4,714,728	+				+1.7
4,714,729	-				-1.4
4,714,729	-				+0.6
4,714,729	-				+0.6
4,714,729	-				+0.8
4,714,729	-				+1.2
4,714,729	-				-1.7
4,714,729	-				-1.0
4,714,729	-				-2.0
4,714,729	-				-1.2
4,714,729	-				-0.2
4,714,729	-				-0.4
4,714,729	-				+0.3
4,714,729	-				+0.7
4,714,729	-				-0.8
4,714,729	-				-0.8
4,714,730	+				+1.0
4,714,730	+				-1.5
4,714,730	+				+0.7
4,714,730	+				+1.2
4,714,730	+				-1.4
4,714,730	+				+0.1
4,714,730	+				-1.4
4,714,731	-				+0.2
4,714,731	-				+0.3
4,714,731	-				+2.2
4,714,731	-				-0.0
4,714,731	-				-2.2
4,714,731	-				-0.8
4,714,731	-				-0.1
4,714,731	-				-0.7
4,714,731	-				-1.2
4,714,731	-				+0.3
4,714,731	-				+1.6
4,714,731	-				-0.8
4,714,752	+				+0.6
4,714,752	+				+0.1
4,714,753	-				+0.3
4,714,753	-				-0.9
4,714,753	-				-0.1
4,714,753	-				-3.2
4,714,753	-				-0.1
4,714,754	+				+0.7
4,714,754	+				-1.4
4,714,754	+				-0.2
4,714,755	-				+1.0
4,714,755	-				+0.1
4,714,755	-				-0.8
4,714,755	-				-0.0
4,714,766	+				-0.1
4,714,766	+				-0.4
4,714,766	+				+0.2
4,714,766	+				-0.6
4,714,767	-				+0.7
4,714,767	-				-0.2
4,714,767	-				+0.3
4,714,767	-				+0.2
4,714,767	-				+0.0
4,714,767	-				-2.2
4,714,767	-				-0.2
4,714,767	-				-0.8
4,714,767	-				-0.7
4,714,980	+		DZA65_RS21815	0.19	+0.2
4,714,980	+		DZA65_RS21815	0.19	+0.4
4,714,981	-		DZA65_RS21815	0.20	+0.9
4,714,981	-		DZA65_RS21815	0.20	-0.7
4,714,981	-		DZA65_RS21815	0.20	-1.0
4,715,018	-		DZA65_RS21815	0.23	+0.8
4,715,018	-		DZA65_RS21815	0.23	+2.2
4,715,097	-		DZA65_RS21815	0.31	-0.2
4,715,097	-				+1.2
4,715,139	-		DZA65_RS21815	0.36	+0.2
4,715,139	-		DZA65_RS21815	0.36	+1.7
4,715,141	+		DZA65_RS21815	0.36	+0.7
4,715,188	+		DZA65_RS21815	0.41	+1.2
4,715,188	+		DZA65_RS21815	0.41	-1.1
4,715,188	+		DZA65_RS21815	0.41	+1.2
4,715,189	-		DZA65_RS21815	0.41	-0.8
4,715,189	-		DZA65_RS21815	0.41	-1.7
4,715,197	-		DZA65_RS21815	0.41	-0.3
4,715,197	-		DZA65_RS21815	0.41	-0.8
4,715,197	-		DZA65_RS21815	0.41	+0.4
4,715,207	-		DZA65_RS21815	0.42	-0.7
4,715,207	-		DZA65_RS21815	0.42	+1.2
4,715,215	+		DZA65_RS21815	0.43	-1.8
4,715,257	+		DZA65_RS21815	0.48	-2.2
4,715,257	+		DZA65_RS21815	0.48	+0.9
4,715,257	+		DZA65_RS21815	0.48	+0.4
4,715,257	+		DZA65_RS21815	0.48	+0.4
4,715,258	-		DZA65_RS21815	0.48	+0.9
4,715,258	-		DZA65_RS21815	0.48	+0.3
4,715,258	-		DZA65_RS21815	0.48	+0.6
4,715,258	-		DZA65_RS21815	0.48	-1.0
4,715,258	-		DZA65_RS21815	0.48	-0.6
4,715,293	-		DZA65_RS21815	0.51	+0.6
4,715,293	-		DZA65_RS21815	0.51	-0.4
4,715,293	-		DZA65_RS21815	0.51	-1.7
4,715,301	+		DZA65_RS21815	0.52	-0.4
4,715,326	+		DZA65_RS21815	0.55	-0.1
4,715,327	-		DZA65_RS21815	0.55	+2.7
4,715,347	+		DZA65_RS21815	0.57	-0.0
4,715,347	+		DZA65_RS21815	0.57	-0.8
4,715,347	+		DZA65_RS21815	0.57	+0.3
4,715,348	-		DZA65_RS21815	0.57	+0.8
4,715,348	-		DZA65_RS21815	0.57	+0.7
4,715,348	-		DZA65_RS21815	0.57	-0.6
4,715,348	-		DZA65_RS21815	0.57	-0.0
4,715,351	+		DZA65_RS21815	0.57	-0.1
4,715,351	+		DZA65_RS21815	0.57	-0.0
4,715,352	-		DZA65_RS21815	0.57	+0.2
4,715,352	-		DZA65_RS21815	0.57	+0.4
4,715,352	-		DZA65_RS21815	0.57	+0.7
4,715,352	-		DZA65_RS21815	0.57	-0.3
4,715,481	+		DZA65_RS21815	0.70	+0.0
4,715,481	+		DZA65_RS21815	0.70	-1.2
4,715,481	+		DZA65_RS21815	0.70	+1.5
4,715,481	+		DZA65_RS21815	0.70	+1.7
4,715,481	+		DZA65_RS21815	0.70	+1.7
4,715,481	+		DZA65_RS21815	0.70	-0.2
4,715,482	-		DZA65_RS21815	0.70	+0.7
4,715,482	-		DZA65_RS21815	0.70	-0.3
4,715,482	-		DZA65_RS21815	0.70	+0.5
4,715,482	-		DZA65_RS21815	0.70	-1.0
4,715,500	+		DZA65_RS21815	0.72	-0.8
4,715,522	+		DZA65_RS21815	0.74	+1.3
4,715,523	-		DZA65_RS21815	0.74	+1.6
4,715,523	-		DZA65_RS21815	0.74	+0.4
4,715,699	-				+0.4
4,715,789	-				-1.8
4,715,879	-		DZA65_RS21820	0.36	+0.2
4,715,897	+		DZA65_RS21820	0.45	+0.4
4,716,004	+				-0.4
4,716,004	+				+0.3
4,716,005	-				+1.2
4,716,005	-				-0.8
4,716,005	-				+1.9
4,716,005	-				+1.2
4,716,005	-				-0.7
4,716,005	-				+0.1
4,716,006	+				-0.8
4,716,006	+				-1.7
4,716,023	+				+0.4
4,716,023	+				+1.6
4,716,023	+				+0.9
4,716,023	+				-1.3
4,716,023	+				-2.2
4,716,023	+				+0.4
4,716,024	-				-1.0
4,716,024	-				-1.4
4,716,024	-				-0.2
4,716,024	-				-0.8
4,716,024	-				+0.2
4,716,024	-				+1.2
4,716,024	-				-0.4
4,716,029	+				+0.4
4,716,029	+				+0.5
4,716,079	+				-0.2
4,716,129	+				+1.5
4,716,129	+				-0.8
4,716,129	+				-0.3
4,716,130	-				-1.5
4,716,130	-				+0.2
4,716,130	-				-2.0
4,716,130	-				-0.6
4,716,130	-				-0.4
4,716,130	-				-2.4
4,716,147	+				-0.2
4,716,147	+				-1.4
4,716,148	-				-1.8
4,716,300	+		DZA65_RS21825	0.12	-1.0
4,716,300	+		DZA65_RS21825	0.12	-1.3
4,716,300	+		DZA65_RS21825	0.12	-1.2
4,716,300	+		DZA65_RS21825	0.12	-1.8
4,716,300	+		DZA65_RS21825	0.12	-2.2
4,716,300	+		DZA65_RS21825	0.12	-1.2
4,716,300	+		DZA65_RS21825	0.12	-0.0
4,716,300	+		DZA65_RS21825	0.12	-2.2
4,716,300	+		DZA65_RS21825	0.12	+0.2
4,716,300	+				-0.4
4,716,300	+		DZA65_RS21825	0.12	-0.8
4,716,300	+		DZA65_RS21825	0.12	-2.3
4,716,300	+		DZA65_RS21825	0.12	-3.2
4,716,301	-		DZA65_RS21825	0.12	-1.4
4,716,301	-		DZA65_RS21825	0.12	-0.9
4,716,301	-		DZA65_RS21825	0.12	-1.4
4,716,301	-		DZA65_RS21825	0.12	-1.7
4,716,301	-		DZA65_RS21825	0.12	-2.1
4,716,301	-		DZA65_RS21825	0.12	-1.3
4,716,301	-		DZA65_RS21825	0.12	-1.1
4,716,301	-		DZA65_RS21825	0.12	-0.3
4,716,301	-		DZA65_RS21825	0.12	-0.2
4,716,337	+		DZA65_RS21825	0.16	-0.4
4,716,337	+		DZA65_RS21825	0.16	-2.0
4,716,337	+		DZA65_RS21825	0.16	-1.7
4,716,337	+		DZA65_RS21825	0.16	+0.8
4,716,337	+		DZA65_RS21825	0.16	-1.8
4,716,337	+		DZA65_RS21825	0.16	-0.1
4,716,337	+		DZA65_RS21825	0.16	-1.7
4,716,337	+		DZA65_RS21825	0.16	+0.7
4,716,337	+		DZA65_RS21825	0.16	-3.0
4,716,337	+		DZA65_RS21825	0.16	-2.2
4,716,337	+		DZA65_RS21825	0.16	-0.8
4,716,337	+		DZA65_RS21825	0.16	-1.0
4,716,337	+		DZA65_RS21825	0.16	-2.2
4,716,337	+		DZA65_RS21825	0.16	-2.0
4,716,337	+		DZA65_RS21825	0.16	-1.9
4,716,337	+		DZA65_RS21825	0.16	-0.5
4,716,337	+		DZA65_RS21825	0.16	-0.8
4,716,338	-		DZA65_RS21825	0.16	-0.8
4,716,338	-		DZA65_RS21825	0.16	-1.0
4,716,338	-		DZA65_RS21825	0.16	-1.2
4,716,338	-		DZA65_RS21825	0.16	-1.0
4,716,338	-		DZA65_RS21825	0.16	+0.4
4,716,338	-		DZA65_RS21825	0.16	-2.0
4,716,338	-		DZA65_RS21825	0.16	-2.4
4,716,338	-		DZA65_RS21825	0.16	-1.8
4,716,338	-		DZA65_RS21825	0.16	+0.2
4,716,342	+		DZA65_RS21825	0.16	-1.2
4,716,342	+		DZA65_RS21825	0.16	-2.3
4,716,342	+		DZA65_RS21825	0.16	-1.0
4,716,342	+		DZA65_RS21825	0.16	-1.8
4,716,342	+		DZA65_RS21825	0.16	-1.3
4,716,342	+		DZA65_RS21825	0.16	-0.0
4,716,342	+		DZA65_RS21825	0.16	-0.4
4,716,342	+		DZA65_RS21825	0.16	-0.2
4,716,342	+		DZA65_RS21825	0.16	-2.5
4,716,343	-		DZA65_RS21825	0.16	-1.4
4,716,343	-		DZA65_RS21825	0.16	-2.5
4,716,343	-		DZA65_RS21825	0.16	-2.5
4,716,343	-		DZA65_RS21825	0.16	-0.2
4,716,343	-		DZA65_RS21825	0.16	+0.4
4,716,343	-				+1.6
4,716,343	-		DZA65_RS21825	0.16	-0.4
4,716,343	-		DZA65_RS21825	0.16	-0.7
4,716,343	-		DZA65_RS21825	0.16	-0.9
4,716,343	-		DZA65_RS21825	0.16	-2.2
4,716,422	+		DZA65_RS21825	0.25	-2.3
4,716,423	-		DZA65_RS21825	0.25	+0.2
4,716,456	+		DZA65_RS21825	0.28	-1.0
4,716,456	+		DZA65_RS21825	0.28	+0.6
4,716,456	+		DZA65_RS21825	0.28	-0.8
4,716,456	+		DZA65_RS21825	0.28	-1.0
4,716,456	+		DZA65_RS21825	0.28	+0.6
4,716,457	-		DZA65_RS21825	0.28	-1.8
4,716,457	-		DZA65_RS21825	0.28	-0.8
4,716,457	-		DZA65_RS21825	0.28	-2.2
4,716,457	-		DZA65_RS21825	0.28	-1.6
4,716,457	-		DZA65_RS21825	0.28	-1.9
4,716,457	-		DZA65_RS21825	0.28	-1.2
4,716,488	+		DZA65_RS21825	0.32	+0.5
4,716,489	-		DZA65_RS21825	0.32	-1.5
4,716,495	+		DZA65_RS21825	0.32	-0.0
4,716,496	-		DZA65_RS21825	0.33	-1.3
4,716,496	-		DZA65_RS21825	0.33	-1.2
4,716,496	-		DZA65_RS21825	0.33	-1.8
4,716,496	-		DZA65_RS21825	0.33	-0.8
4,716,496	-		DZA65_RS21825	0.33	-0.7
4,716,499	-		DZA65_RS21825	0.33	-1.2
4,716,582	+		DZA65_RS21825	0.42	-0.4
4,716,582	+				+0.6
4,716,582	+		DZA65_RS21825	0.42	-0.8
4,716,582	+		DZA65_RS21825	0.42	-1.3
4,716,582	+		DZA65_RS21825	0.42	-0.6
4,716,582	+		DZA65_RS21825	0.42	-2.2
4,716,582	+		DZA65_RS21825	0.42	-0.4
4,716,582	+				-0.8
4,716,582	+		DZA65_RS21825	0.42	-1.3
4,716,582	+		DZA65_RS21825	0.42	-0.4
4,716,583	-		DZA65_RS21825	0.42	-2.0
4,716,583	-		DZA65_RS21825	0.42	-0.1
4,716,583	-		DZA65_RS21825	0.42	-0.8
4,716,583	-		DZA65_RS21825	0.42	-2.8
4,716,583	-		DZA65_RS21825	0.42	-1.4
4,716,583	-		DZA65_RS21825	0.42	-1.2
4,716,583	-		DZA65_RS21825	0.42	-1.4
4,716,583	-		DZA65_RS21825	0.42	+0.3
4,716,583	-		DZA65_RS21825	0.42	-1.8
4,716,583	-		DZA65_RS21825	0.42	-0.2
4,716,588	+		DZA65_RS21825	0.42	-1.6
4,716,589	-		DZA65_RS21825	0.43	-2.4
4,716,589	-		DZA65_RS21825	0.43	+0.2
4,716,589	-		DZA65_RS21825	0.43	+1.2
4,716,589	-		DZA65_RS21825	0.43	-1.4
4,716,589	-		DZA65_RS21825	0.43	-2.0
4,716,589	-		DZA65_RS21825	0.43	-0.8
4,716,589	-		DZA65_RS21825	0.43	-2.4
4,716,589	-		DZA65_RS21825	0.43	-0.1
4,716,589	-		DZA65_RS21825	0.43	-1.4
4,716,589	-		DZA65_RS21825	0.43	-2.2
4,716,589	-		DZA65_RS21825	0.43	-1.2
4,716,602	+		DZA65_RS21825	0.44	-2.7
4,716,602	+		DZA65_RS21825	0.44	-2.0
4,716,602	+		DZA65_RS21825	0.44	-1.4
4,716,626	+		DZA65_RS21825	0.47	-0.8
4,716,626	+		DZA65_RS21825	0.47	-0.4
4,716,627	-		DZA65_RS21825	0.47	-2.8
4,716,627	-		DZA65_RS21825	0.47	-0.4
4,716,627	-		DZA65_RS21825	0.47	-2.0
4,716,699	+		DZA65_RS21825	0.54	-2.0
4,716,744	+		DZA65_RS21825	0.59	-2.4
4,716,744	+		DZA65_RS21825	0.59	-1.7
4,716,745	-		DZA65_RS21825	0.59	-2.3
4,716,745	-		DZA65_RS21825	0.59	-1.2
4,716,745	-		DZA65_RS21825	0.59	-1.4
4,716,745	-		DZA65_RS21825	0.59	-1.8
4,716,752	+		DZA65_RS21825	0.60	+0.2
4,716,753	-		DZA65_RS21825	0.60	-1.8
4,716,753	-		DZA65_RS21825	0.60	-1.5