Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17645

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
3,801,353	+				-1.4
3,801,353	+				-0.5
3,801,353	+				+0.5
3,801,353	+				-0.2
3,801,353	+				+0.4
3,801,353	+				+0.1
3,801,353	+				-0.7
3,801,354	-				+0.4
3,801,354	-				+0.7
3,801,354	-				-0.4
3,801,354	-				+1.2
3,801,354	-				+0.6
3,801,354	-				+1.7
3,801,354	-				+0.5
3,801,354	-				+2.2
3,801,354	-				-1.0
3,801,362	-				+2.5
3,801,364	+				-1.4
3,801,436	+				-0.4
3,801,436	+				+0.9
3,801,438	+				+0.2
3,801,439	-				-2.3
3,801,439	-				-0.7
3,801,439	-				-0.7
3,801,469	+				+0.5
3,801,469	+				+0.0
3,801,469	+				-1.4
3,801,469	+				+3.4
3,801,469	+				-0.1
3,801,469	+				-0.3
3,801,469	+				-0.7
3,801,469	+				+1.9
3,801,469	+				+0.2
3,801,469	+				-0.9
3,801,470	-				-1.5
3,801,470	-				-1.9
3,801,470	-				+0.1
3,801,470	-				-1.7
3,801,470	-				-1.7
3,801,470	-				-0.8
3,801,470	-				-0.9
3,801,471	+				-0.6
3,801,471	+				-0.9
3,801,471	+				+0.9
3,801,471	+				+0.1
3,801,471	+				-0.7
3,801,471	+				+0.9
3,801,471	+				+0.3
3,801,472	-				-1.9
3,801,472	-				-1.1
3,801,472	-				-2.4
3,801,472	-				-1.8
3,801,472	-				-1.4
3,801,472	-				-1.6
3,801,472	-				-0.1
3,801,472	-				-1.9
3,801,472	-				-1.4
3,801,472	-				-0.9
3,801,473	+				-0.8
3,801,473	+				-1.1
3,801,473	+				+0.4
3,801,474	-				-1.7
3,801,474	-				-0.1
3,801,474	-				+0.3
3,801,474	-				-0.9
3,801,508	+				+0.4
3,801,514	+				-0.1
3,801,514	+				-0.4
3,801,515	-				+0.2
3,801,515	-				-1.4
3,801,518	+				-0.7
3,801,518	+				-0.1
3,801,518	+				-0.6
3,801,518	+				-0.6
3,801,518	+				-1.0
3,801,518	+				-1.7
3,801,518	+				-1.1
3,801,518	+				-0.1
3,801,519	-				-1.2
3,801,519	-				+0.5
3,801,519	-				-1.2
3,801,519	-				-1.8
3,801,527	+				+0.4
3,801,528	-				+1.9
3,801,529	+				-0.1
3,801,530	-				-1.7
3,801,596	+				+0.1
3,801,621	+				+0.3
3,801,669	-				+1.9
3,801,669	-				-1.2
3,801,669	-				-2.3
3,801,669	-				+1.5
3,801,669	-				-0.2
3,801,706	+				-0.6
3,801,706	+				-1.4
3,801,717	-				+0.6
3,801,722	+				+0.1
3,801,722	+				-1.3
3,801,722	+				+0.9
3,801,723	-				-1.4
3,801,723	-				-0.3
3,801,728	-				-1.1
3,801,728	-				-0.7
3,801,728	-				-1.0
3,801,731	+				-1.1
3,801,732	-				-1.1
3,801,732	-				-0.7
3,801,732	-				-1.1
3,801,899	+				+0.2
3,801,899	+				+1.9
3,801,899	+				-0.7
3,801,900	-				-0.2
3,801,900	-				+0.3
3,801,900	-				-1.3
3,801,900	-				-1.9
3,801,900	-				+0.7
3,801,900	-				+0.3
3,801,900	-				-1.7
3,801,936	-				+0.2
3,801,969	+				+0.3
3,801,969	+				+0.1
3,802,090	-				+0.9
3,802,157	+				-1.7
3,802,158	-				-0.2
3,802,158	-				+0.6
3,802,158	-				+0.2
3,802,183	-				+0.3
3,802,225	+				-1.2
3,802,225	+				+1.0
3,802,225	+				-1.2
3,802,247	-				-2.8
3,802,247	-				-0.1
3,802,247	-				-0.4
3,802,292	-				+0.3
3,802,292	-				-1.2
3,802,301	+				-0.7
3,802,301	+				+2.5
3,802,301	+				-0.7
3,802,302	-				+0.4
3,802,302	-				+0.9
3,802,302	-				-0.7
3,802,359	+				+0.1
3,802,359	+				+0.5
3,802,359	+				-2.1
3,802,359	+				-0.1
3,802,359	+				-1.4
3,802,360	-				+1.0
3,802,360	-				-0.7
3,802,362	+				+1.2
3,802,363	-				-1.1
3,802,363	-				+0.3
3,802,404	+		DZA65_RS17645	0.18	-0.8
3,802,404	+		DZA65_RS17645	0.18	-0.7
3,802,404	+		DZA65_RS17645	0.18	+0.2
3,802,405	-		DZA65_RS17645	0.18	+0.6
3,802,409	+		DZA65_RS17645	0.19	+0.7
3,802,501	+		DZA65_RS17645	0.50	-0.2
3,802,501	+		DZA65_RS17645	0.50	+0.5
3,802,502	-		DZA65_RS17645	0.51	-0.9
3,802,578	+		DZA65_RS17645	0.76	+0.9
3,802,579	-		DZA65_RS17645	0.76	+0.2
3,802,579	-		DZA65_RS17645	0.76	+1.6
3,802,615	+		DZA65_RS17645	0.89	-0.1
3,802,615	+		DZA65_RS17645	0.89	-0.4
3,802,615	+		DZA65_RS17645	0.89	+2.2
3,802,616	-		DZA65_RS17645	0.89	-1.8
3,802,616	-		DZA65_RS17645	0.89	+0.1
3,802,616	-		DZA65_RS17645	0.89	+1.6
3,802,619	-				-0.5
3,802,619	-				-1.1
3,802,619	-				+0.7
3,802,676	-				+0.1
3,802,676	-				+0.5
3,802,718	+				+0.5
3,802,718	+				-0.7
3,802,718	+				+0.1
3,802,718	+				-1.3
3,802,718	+				+0.3
3,802,719	-				-0.2
3,802,719	-				+0.6
3,802,731	+				-2.8
3,802,732	-				+0.2
3,802,819	+		DZA65_RS17650	0.12	-0.0
3,802,819	+		DZA65_RS17650	0.12	-0.1
3,802,819	+		DZA65_RS17650	0.12	+0.9
3,802,819	+		DZA65_RS17650	0.12	+1.6
3,802,819	+		DZA65_RS17650	0.12	-0.5
3,802,819	+		DZA65_RS17650	0.12	+1.0
3,802,819	+		DZA65_RS17650	0.12	-1.0
3,802,819	+		DZA65_RS17650	0.12	-0.8
3,802,819	+		DZA65_RS17650	0.12	+0.9
3,802,820	-		DZA65_RS17650	0.12	-1.4
3,802,820	-		DZA65_RS17650	0.12	+0.3
3,802,820	-		DZA65_RS17650	0.12	-0.4
3,802,820	-		DZA65_RS17650	0.12	-1.4
3,802,820	-		DZA65_RS17650	0.12	-2.1
3,802,820	-		DZA65_RS17650	0.12	+0.2
3,802,964	-		DZA65_RS17650	0.29	-0.5
3,802,983	+		DZA65_RS17650	0.32	-1.4
3,802,983	+		DZA65_RS17650	0.32	+0.1
3,802,983	+		DZA65_RS17650	0.32	+0.0
3,802,983	+		DZA65_RS17650	0.32	-0.7
3,802,983	+		DZA65_RS17650	0.32	-0.1
3,802,983	+		DZA65_RS17650	0.32	-1.4
3,802,984	-		DZA65_RS17650	0.32	-1.4
3,802,984	-		DZA65_RS17650	0.32	+0.9
3,802,984	-		DZA65_RS17650	0.32	-0.3
3,802,984	-		DZA65_RS17650	0.32	+0.5
3,803,025	+		DZA65_RS17650	0.37	-1.1
3,803,026	-		DZA65_RS17650	0.37	+1.3
3,803,094	-		DZA65_RS17650	0.45	-0.1
3,803,170	+		DZA65_RS17650	0.54	+0.2
3,803,170	+		DZA65_RS17650	0.54	+2.9
3,803,170	+		DZA65_RS17650	0.54	+0.4
3,803,170	+		DZA65_RS17650	0.54	-0.3
3,803,170	+		DZA65_RS17650	0.54	+0.6
3,803,170	+		DZA65_RS17650	0.54	+0.6
3,803,170	+		DZA65_RS17650	0.54	-0.1
3,803,170	+		DZA65_RS17650	0.54	-0.6
3,803,170	+		DZA65_RS17650	0.54	-0.2
3,803,171	-		DZA65_RS17650	0.54	+0.3
3,803,171	-		DZA65_RS17650	0.54	+0.2
3,803,171	-		DZA65_RS17650	0.54	+0.5
3,803,171	-		DZA65_RS17650	0.54	+0.6
3,803,171	-		DZA65_RS17650	0.54	+0.4
3,803,171	-		DZA65_RS17650	0.54	+0.3
3,803,174	+		DZA65_RS17650	0.55	-0.2
3,803,174	+		DZA65_RS17650	0.55	+0.9
3,803,174	+		DZA65_RS17650	0.55	+1.9
3,803,174	+		DZA65_RS17650	0.55	-0.1
3,803,174	+		DZA65_RS17650	0.55	+0.9
3,803,174	+		DZA65_RS17650	0.55	-0.2
3,803,174	+		DZA65_RS17650	0.55	-1.1
3,803,174	+		DZA65_RS17650	0.55	+0.2
3,803,174	+		DZA65_RS17650	0.55	-2.3
3,803,174	+		DZA65_RS17650	0.55	-0.4
3,803,174	+		DZA65_RS17650	0.55	-1.0
3,803,174	+		DZA65_RS17650	0.55	-0.9
3,803,174	+		DZA65_RS17650	0.55	-1.6
3,803,174	+		DZA65_RS17650	0.55	-0.2
3,803,174	+		DZA65_RS17650	0.55	-0.7
3,803,174	+		DZA65_RS17650	0.55	-0.2
3,803,175	-		DZA65_RS17650	0.55	-1.0
3,803,175	-		DZA65_RS17650	0.55	+0.1
3,803,175	-		DZA65_RS17650	0.55	+0.0
3,803,175	-		DZA65_RS17650	0.55	+0.9
3,803,230	+		DZA65_RS17650	0.61	+0.4
3,803,231	-		DZA65_RS17650	0.61	-0.1
3,803,231	-		DZA65_RS17650	0.61	+0.5
3,803,278	+		DZA65_RS17650	0.67	+1.0
3,803,279	-		DZA65_RS17650	0.67	-1.1
3,803,306	+		DZA65_RS17650	0.71	-0.2
3,803,307	-		DZA65_RS17650	0.71	-1.1
3,803,355	+		DZA65_RS17650	0.76	-0.9
3,803,355	+		DZA65_RS17650	0.76	+0.0
3,803,355	+		DZA65_RS17650	0.76	-0.1
3,803,355	+		DZA65_RS17650	0.76	-1.7
3,803,356	-		DZA65_RS17650	0.77	+0.3
3,803,443	+		DZA65_RS17650	0.87	-0.3
3,803,444	-		DZA65_RS17650	0.87	-1.3
3,803,629	+				+2.5
3,803,630	-				+0.3
3,803,630	-				-0.8