Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS16460

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
3,564,730	+		DZA65_RS16455	0.42	-0.3
3,564,732	+		DZA65_RS16455	0.42	-0.3
3,564,732	+		DZA65_RS16455	0.42	-0.8
3,564,732	+		DZA65_RS16455	0.42	+0.9
3,564,732	+				+0.8
3,564,732	+		DZA65_RS16455	0.42	+1.0
3,564,732	+		DZA65_RS16455	0.42	-0.0
3,564,732	+		DZA65_RS16455	0.42	-0.1
3,564,732	+		DZA65_RS16455	0.42	+0.3
3,564,732	+		DZA65_RS16455	0.42	-0.6
3,564,732	+		DZA65_RS16455	0.42	+0.8
3,564,732	+		DZA65_RS16455	0.42	+0.8
3,564,732	+		DZA65_RS16455	0.42	+2.0
3,564,733	-		DZA65_RS16455	0.42	-0.5
3,564,733	-		DZA65_RS16455	0.42	-0.2
3,564,733	-		DZA65_RS16455	0.42	+0.0
3,564,733	-		DZA65_RS16455	0.42	-0.8
3,564,733	-		DZA65_RS16455	0.42	-0.8
3,564,733	-		DZA65_RS16455	0.42	-0.3
3,564,733	-		DZA65_RS16455	0.42	+0.1
3,564,733	-		DZA65_RS16455	0.42	+0.8
3,564,733	-		DZA65_RS16455	0.42	+0.3
3,564,733	-		DZA65_RS16455	0.42	-1.2
3,564,733	-		DZA65_RS16455	0.42	+0.0
3,564,733	-		DZA65_RS16455	0.42	-1.0
3,564,733	-		DZA65_RS16455	0.42	+0.9
3,564,733	-		DZA65_RS16455	0.42	+1.1
3,564,750	-		DZA65_RS16455	0.43	-0.9
3,564,857	+		DZA65_RS16455	0.49	-0.3
3,564,858	-		DZA65_RS16455	0.49	+0.2
3,564,858	-		DZA65_RS16455	0.49	-1.8
3,564,897	+		DZA65_RS16455	0.52	-0.8
3,564,898	-		DZA65_RS16455	0.52	+0.1
3,564,934	+		DZA65_RS16455	0.54	-1.2
3,564,968	+		DZA65_RS16455	0.56	+0.9
3,564,968	+		DZA65_RS16455	0.56	-0.5
3,564,969	-		DZA65_RS16455	0.56	-0.8
3,564,969	-		DZA65_RS16455	0.56	-1.0
3,564,969	-		DZA65_RS16455	0.56	-0.2
3,564,969	-		DZA65_RS16455	0.56	-0.4
3,564,973	+		DZA65_RS16455	0.56	-0.5
3,564,973	+		DZA65_RS16455	0.56	+1.2
3,564,973	+		DZA65_RS16455	0.56	-0.9
3,564,974	-		DZA65_RS16455	0.56	-0.4
3,564,997	-		DZA65_RS16455	0.58	-0.3
3,564,999	+		DZA65_RS16455	0.58	-2.5
3,565,009	+		DZA65_RS16455	0.58	-0.1
3,565,009	+		DZA65_RS16455	0.58	-0.7
3,565,009	+		DZA65_RS16455	0.58	-0.5
3,565,010	-		DZA65_RS16455	0.58	+1.1
3,565,010	-		DZA65_RS16455	0.58	-0.6
3,565,010	-		DZA65_RS16455	0.58	-0.6
3,565,010	-		DZA65_RS16455	0.58	+0.6
3,565,010	-		DZA65_RS16455	0.58	-2.4
3,565,042	+		DZA65_RS16455	0.60	-2.2
3,565,054	+		DZA65_RS16455	0.61	-0.1
3,565,054	+		DZA65_RS16455	0.61	-0.6
3,565,093	+		DZA65_RS16455	0.63	-0.4
3,565,095	+		DZA65_RS16455	0.63	+0.6
3,565,095	+		DZA65_RS16455	0.63	-0.7
3,565,095	+		DZA65_RS16455	0.63	+0.0
3,565,095	+		DZA65_RS16455	0.63	+0.3
3,565,095	+		DZA65_RS16455	0.63	+0.4
3,565,095	+		DZA65_RS16455	0.63	+2.3
3,565,096	-		DZA65_RS16455	0.63	+0.2
3,565,096	-		DZA65_RS16455	0.63	-0.2
3,565,096	-		DZA65_RS16455	0.63	-2.0
3,565,096	-		DZA65_RS16455	0.63	-0.6
3,565,096	-		DZA65_RS16455	0.63	-0.6
3,565,096	-		DZA65_RS16455	0.63	-0.4
3,565,096	-		DZA65_RS16455	0.63	+0.9
3,565,160	+		DZA65_RS16455	0.67	-2.4
3,565,160	+		DZA65_RS16455	0.67	+0.8
3,565,160	+		DZA65_RS16455	0.67	+1.4
3,565,198	+		DZA65_RS16455	0.70	-2.0
3,565,198	+		DZA65_RS16455	0.70	-1.1
3,565,199	-		DZA65_RS16455	0.70	-0.8
3,565,199	-		DZA65_RS16455	0.70	-1.5
3,565,222	+		DZA65_RS16455	0.71	-0.9
3,565,223	-		DZA65_RS16455	0.71	-0.4
3,565,233	+		DZA65_RS16455	0.72	+1.3
3,565,233	+		DZA65_RS16455	0.72	-0.4
3,565,233	+		DZA65_RS16455	0.72	+0.3
3,565,233	+		DZA65_RS16455	0.72	-0.0
3,565,233	+		DZA65_RS16455	0.72	-0.8
3,565,234	-		DZA65_RS16455	0.72	-2.0
3,565,265	-		DZA65_RS16455	0.74	+0.8
3,565,286	+		DZA65_RS16455	0.75	-2.0
3,565,287	-		DZA65_RS16455	0.75	+0.1
3,565,287	-		DZA65_RS16455	0.75	-0.2
3,565,287	-		DZA65_RS16455	0.75	-0.4
3,565,308	+		DZA65_RS16455	0.76	-1.8
3,565,308	+		DZA65_RS16455	0.76	-0.8
3,565,308	+		DZA65_RS16455	0.76	+0.0
3,565,308	+		DZA65_RS16455	0.76	-0.8
3,565,308	+		DZA65_RS16455	0.76	+0.7
3,565,309	-		DZA65_RS16455	0.76	+0.4
3,565,309	-		DZA65_RS16455	0.76	-1.2
3,565,309	-		DZA65_RS16455	0.76	+0.1
3,565,326	+		DZA65_RS16455	0.77	-1.0
3,565,419	+		DZA65_RS16455	0.83	+0.2
3,565,420	-		DZA65_RS16455	0.83	-0.5
3,565,420	-		DZA65_RS16455	0.83	+0.6
3,565,420	-		DZA65_RS16455	0.83	-1.1
3,565,420	-		DZA65_RS16455	0.83	-1.5
3,565,478	+		DZA65_RS16455	0.86	+1.3
3,565,479	-		DZA65_RS16455	0.86	+0.0
3,565,539	-				+0.8
3,565,539	-				+0.1
3,565,616	-				-0.9
3,565,616	-				-2.2
3,565,616	-				+0.2
3,565,675	+				+1.2
3,565,675	+				-0.8
3,565,676	-				-1.1
3,565,676	-				+1.2
3,565,678	+				-0.2
3,565,678	+				+0.4
3,565,679	-				+0.2
3,565,679	-				+1.6
3,565,679	-				+0.4
3,565,679	-				-1.4
3,565,679	-				-0.5
3,565,679	-				-0.3
3,565,722	-				+0.6
3,565,733	+				+0.8
3,565,733	+				-0.1
3,565,734	-				+1.3
3,565,734	-				-1.2
3,565,753	+		DZA65_RS16460	0.14	+1.6
3,565,753	+		DZA65_RS16460	0.14	+1.0
3,565,753	+		DZA65_RS16460	0.14	+0.3
3,565,753	+		DZA65_RS16460	0.14	+0.8
3,565,754	-		DZA65_RS16460	0.14	-0.2
3,565,915	+				-0.1
3,565,915	+				+0.2
3,565,915	+				+0.6
3,565,915	+				-0.5
3,565,915	+				+0.3
3,565,916	-				+0.6
3,565,916	-				+0.2
3,565,916	-				-0.2
3,565,930	+				+2.1
3,565,930	+				-0.5
3,565,930	+				+1.1
3,565,930	+				+0.5
3,565,930	+				+0.8
3,565,930	+				+1.3
3,565,930	+				-0.2
3,565,930	+				+0.4
3,565,930	+				-0.4
3,565,930	+				+1.4
3,565,930	+				-2.4
3,565,930	+				+3.4
3,565,930	+				+0.6
3,565,930	+				-1.0
3,565,930	+				+0.8
3,565,930	+				-0.9
3,565,930	+				+0.8
3,565,930	+				-0.1
3,565,931	-				+0.2
3,565,931	-				+1.8
3,565,931	-				+0.2
3,565,931	-				+0.8
3,565,931	-				+0.5
3,565,931	-				-0.8
3,565,931	-				-0.5
3,565,931	-				+0.5
3,565,931	-				-2.9
3,565,931	-				-0.2
3,565,931	-				-0.2
3,565,931	-				+0.6
3,565,931	-				-0.5
3,565,931	-				+0.8
3,565,931	-				+0.8
3,565,931	-				-0.4
3,565,931	-				-2.3
3,565,931	-				-0.4
3,565,931	-				-0.8
3,565,931	-				+0.6
3,565,934	+				-0.5
3,565,934	+				+1.2
3,565,934	+				-0.4
3,565,934	+				-0.5
3,565,935	-				-1.2
3,565,935	-				-0.2
3,565,935	-				-0.7
3,565,935	-				+0.1
3,565,935	-				-2.4
3,565,935	-				+0.8
3,565,936	+				+0.6
3,565,936	+				+0.1
3,565,936	+				+1.4
3,565,937	-				-0.5
3,565,937	-				+0.0
3,565,937	-				-0.2
3,566,141	-				+0.5
3,566,151	+				+0.8
3,566,151	+				+1.0
3,566,152	-				+1.6
3,566,152	-				-0.3
3,566,152	-				+0.1
3,566,189	+				+0.8
3,566,189	+				+0.3
3,566,189	+				-0.2
3,566,189	+				-0.6
3,566,189	+				+0.8
3,566,189	+				-0.3
3,566,189	+				+0.8
3,566,190	-				-0.6
3,566,190	-				-0.8
3,566,190	-				+0.1
3,566,190	-				-1.4
3,566,242	+				-2.4
3,566,269	-				-0.3
3,566,392	+				-0.4
3,566,411	+				-1.2
3,566,420	+				+0.1
3,566,427	+				+0.2
3,566,427	+				+0.2
3,566,428	-				+0.1
3,566,437	-				+0.2
3,566,445	+				-0.9
3,566,445	+				-0.4
3,566,445	+				-0.6
3,566,446	-				-0.8
3,566,446	-				-0.2
3,566,492	+				+1.8
3,566,492	+				+0.9
3,566,492	+				-0.2
3,566,493	-				-2.2
3,566,493	-				-0.4
3,566,493	-				-1.4
3,566,493	-				-0.4
3,566,500	+				-0.5
3,566,500	+				-1.1
3,566,500	+				+0.3
3,566,500	+				-0.3
3,566,500	+				+0.0
3,566,500	+				+0.0
3,566,500	+				-0.9
3,566,501	-				-0.3
3,566,501	-				+2.5
3,566,501	-				-0.7
3,566,501	-				-0.2
3,566,501	-				+0.5
3,566,504	+				-0.4
3,566,504	+				+0.2
3,566,504	+				+1.1
3,566,504	+				+0.6
3,566,504	+				-2.0
3,566,505	-				-0.5
3,566,505	-				+0.2
3,566,505	-				-1.5
3,566,505	-				-0.2
3,566,505	-				-0.8
3,566,505	-				+0.1
3,566,505	-				+1.0
3,566,505	-				+0.6
3,566,505	-				-0.0
3,566,505	-				-0.2
3,566,505	-				-1.2
3,566,563	+		DZA65_RS16465	0.11	+0.5
3,566,564	-		DZA65_RS16465	0.11	+0.3
3,566,597	+		DZA65_RS16465	0.13	-0.3
3,566,611	+		DZA65_RS16465	0.14	-0.2
3,566,612	-		DZA65_RS16465	0.14	+0.1
3,566,678	+		DZA65_RS16465	0.18	+1.3
3,566,678	+		DZA65_RS16465	0.18	-0.0
3,566,678	+		DZA65_RS16465	0.18	-1.1
3,566,678	+		DZA65_RS16465	0.18	+1.2
3,566,678	+		DZA65_RS16465	0.18	+0.8
3,566,678	+		DZA65_RS16465	0.18	-1.5
3,566,679	-		DZA65_RS16465	0.19	-1.8
3,566,695	-		DZA65_RS16465	0.20	+0.7
3,566,734	+		DZA65_RS16465	0.22	+0.1
3,566,734	+		DZA65_RS16465	0.22	-1.8
3,566,734	+		DZA65_RS16465	0.22	-0.6
3,566,734	+		DZA65_RS16465	0.22	-1.5
3,566,768	-		DZA65_RS16465	0.25	+1.2
3,566,789	+		DZA65_RS16465	0.26	-0.2
3,566,789	+		DZA65_RS16465	0.26	+0.7
3,566,795	+		DZA65_RS16465	0.26	+0.6
3,566,795	+		DZA65_RS16465	0.26	-0.2
3,566,795	+		DZA65_RS16465	0.26	-0.6
3,566,795	+		DZA65_RS16465	0.26	+1.4
3,566,796	-		DZA65_RS16465	0.26	-0.3
3,566,822	+		DZA65_RS16465	0.28	+1.1
3,566,898	+		DZA65_RS16465	0.33	-0.0
3,566,898	+		DZA65_RS16465	0.33	-1.2
3,566,898	+		DZA65_RS16465	0.33	+1.2
3,566,898	+		DZA65_RS16465	0.33	-1.5
3,566,898	+		DZA65_RS16465	0.33	+1.4
3,566,899	-		DZA65_RS16465	0.33	+0.2
3,566,899	-		DZA65_RS16465	0.33	+1.9
3,566,899	-		DZA65_RS16465	0.33	+0.1
3,566,921	+		DZA65_RS16465	0.35	+0.4
3,566,922	-		DZA65_RS16465	0.35	+0.5
3,566,922	-		DZA65_RS16465	0.35	-0.8
3,566,922	-		DZA65_RS16465	0.35	-0.3
3,566,922	-		DZA65_RS16465	0.35	+0.6
3,566,922	-		DZA65_RS16465	0.35	+0.4
3,566,925	+		DZA65_RS16465	0.35	-0.0
3,566,925	+		DZA65_RS16465	0.35	-0.2
3,566,925	+		DZA65_RS16465	0.35	-1.8
3,566,925	+		DZA65_RS16465	0.35	+0.6
3,566,925	+		DZA65_RS16465	0.35	-0.3
3,566,925	+		DZA65_RS16465	0.35	-1.2
3,566,926	-		DZA65_RS16465	0.35	-0.8
3,566,926	-		DZA65_RS16465	0.35	+1.4
3,566,926	-		DZA65_RS16465	0.35	-0.6
3,566,926	-		DZA65_RS16465	0.35	-0.5
3,566,926	-		DZA65_RS16465	0.35	+0.6