Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15115

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
3,293,249	-				+1.5
3,293,249	-				-0.3
3,293,249	-				-0.6
3,293,277	-				+1.3
3,293,322	+				+0.7
3,293,322	+				+0.6
3,293,322	+				+0.7
3,293,323	-				-0.6
3,293,323	-				-0.3
3,293,344	+				-0.3
3,293,344	+				+0.1
3,293,344	+				-0.9
3,293,344	+				-0.9
3,293,345	-				+0.7
3,293,345	-				-1.6
3,293,345	-				+2.3
3,293,345	-				-1.0
3,293,369	+				-0.7
3,293,402	+				-0.6
3,293,402	+				-1.2
3,293,403	-				+0.1
3,293,444	+				+0.6
3,293,445	-				+0.2
3,293,452	+				-0.0
3,293,453	-				-0.4
3,293,453	-				+1.2
3,293,543	+				-0.9
3,293,543	+				+0.9
3,293,543	+				+0.4
3,293,543	+				-1.2
3,293,544	-				+0.7
3,293,544	-				+0.7
3,293,616	+		DZA65_RS15110	0.18	-1.3
3,293,616	+		DZA65_RS15110	0.18	+0.7
3,293,616	+		DZA65_RS15110	0.18	-0.9
3,293,617	-		DZA65_RS15110	0.18	-1.3
3,293,617	-		DZA65_RS15110	0.18	-0.1
3,293,617	-		DZA65_RS15110	0.18	+1.9
3,293,617	-		DZA65_RS15110	0.18	-1.2
3,293,617	-		DZA65_RS15110	0.18	-0.2
3,293,617	-		DZA65_RS15110	0.18	-2.5
3,293,617	-		DZA65_RS15110	0.18	-0.4
3,293,711	+		DZA65_RS15110	0.35	+0.5
3,293,711	+		DZA65_RS15110	0.35	+0.1
3,293,711	+		DZA65_RS15110	0.35	+1.5
3,293,711	+		DZA65_RS15110	0.35	+0.7
3,293,711	+		DZA65_RS15110	0.35	-0.0
3,293,711	+		DZA65_RS15110	0.35	-1.4
3,293,711	+		DZA65_RS15110	0.35	-0.2
3,293,711	+		DZA65_RS15110	0.35	-0.5
3,293,711	+		DZA65_RS15110	0.35	-2.4
3,293,712	-		DZA65_RS15110	0.35	-2.7
3,293,712	-		DZA65_RS15110	0.35	-0.5
3,293,712	-		DZA65_RS15110	0.35	-0.3
3,293,712	-		DZA65_RS15110	0.35	-1.2
3,293,712	-		DZA65_RS15110	0.35	+0.3
3,293,712	-		DZA65_RS15110	0.35	+0.6
3,293,712	-		DZA65_RS15110	0.35	+0.5
3,293,712	-		DZA65_RS15110	0.35	+0.1
3,293,712	-		DZA65_RS15110	0.35	+1.7
3,293,712	-		DZA65_RS15110	0.35	+0.4
3,293,712	-		DZA65_RS15110	0.35	+1.0
3,293,714	+		DZA65_RS15110	0.36	+1.2
3,293,714	+		DZA65_RS15110	0.36	+0.7
3,293,714	+		DZA65_RS15110	0.36	-1.7
3,293,714	+		DZA65_RS15110	0.36	-0.3
3,293,714	+		DZA65_RS15110	0.36	-0.3
3,293,715	-		DZA65_RS15110	0.36	-1.3
3,293,715	-		DZA65_RS15110	0.36	+0.1
3,293,715	-		DZA65_RS15110	0.36	+0.2
3,293,715	-		DZA65_RS15110	0.36	-1.6
3,293,715	-		DZA65_RS15110	0.36	+2.4
3,293,715	-		DZA65_RS15110	0.36	+0.5
3,293,774	+		DZA65_RS15110	0.47	+2.0
3,293,775	-		DZA65_RS15110	0.47	-1.0
3,293,816	+		DZA65_RS15110	0.54	-0.0
3,293,832	+		DZA65_RS15110	0.57	+1.0
3,293,832	+		DZA65_RS15110	0.57	+0.5
3,293,832	+		DZA65_RS15110	0.57	-1.9
3,293,833	-		DZA65_RS15110	0.57	-1.9
3,294,004	+		DZA65_RS15110	0.89	+1.2
3,294,004	+		DZA65_RS15110	0.89	-0.9
3,294,005	-		DZA65_RS15110	0.89	-0.6
3,294,005	-		DZA65_RS15110	0.89	-0.4
3,294,044	+				+0.0
3,294,045	-				-0.5
3,294,045	-				-0.5
3,294,056	+				+0.6
3,294,056	+				+1.5
3,294,056	+				+2.8
3,294,056	+				-0.5
3,294,057	-				+0.1
3,294,057	-				+0.3
3,294,060	+				+0.1
3,294,060	+				-1.5
3,294,060	+				-1.2
3,294,060	+				+0.4
3,294,061	-				+1.0
3,294,061	-				+0.2
3,294,061	-				+0.3
3,294,061	-				+0.4
3,294,061	-				+1.5
3,294,066	+				+0.1
3,294,083	+				-2.1
3,294,083	+				+0.3
3,294,083	+				-1.4
3,294,083	+				-0.6
3,294,083	+				-0.3
3,294,083	+				+1.0
3,294,083	+				-0.3
3,294,084	-				-0.4
3,294,084	-				+1.0
3,294,084	-				-0.0
3,294,084	-				+1.0
3,294,085	+				-2.6
3,294,085	+				-0.2
3,294,086	-				+0.2
3,294,086	-				-0.6
3,294,086	-				-0.6
3,294,089	+				-1.1
3,294,089	+				+0.4
3,294,089	+				-0.2
3,294,089	+				-1.6
3,294,090	-				+1.3
3,294,090	-				-0.6
3,294,090	-				+0.2
3,294,090	-				-1.0
3,294,090	-				-0.5
3,294,090	-				-0.2
3,294,090	-				-0.2
3,294,090	-				-0.3
3,294,090	-				-0.2
3,294,090	-				-0.3
3,294,090	-				-0.3
3,294,090	-				-1.6
3,294,090	-				-1.5
3,294,090	-				+0.1
3,294,093	-				-0.7
3,294,093	-				+0.3
3,294,093	-				-0.3
3,294,093	-				+0.9
3,294,111	+				+0.2
3,294,111	+				+0.0
3,294,111	+				+0.4
3,294,111	+				-0.7
3,294,111	+				-0.4
3,294,112	-				+0.3
3,294,112	-				-0.9
3,294,119	+				-0.7
3,294,119	+				-1.3
3,294,120	-				-0.0
3,294,120	-				-0.9
3,294,120	-				+0.7
3,294,186	+				+1.2
3,294,186	+				-1.0
3,294,186	+				+1.3
3,294,186	+				+1.6
3,294,187	-				+1.3
3,294,187	-				-0.1
3,294,192	-				-0.6
3,294,192	-				-2.1
3,294,192	-				-0.3
3,294,192	-				-0.2
3,294,218	+				+1.3
3,294,218	+				-0.2
3,294,218	+				+0.2
3,294,218	+				+0.3
3,294,218	+				-0.1
3,294,218	+				+1.9
3,294,218	+				-0.3
3,294,218	+				+1.5
3,294,219	-				+0.4
3,294,219	-				-0.7
3,294,268	+				+0.4
3,294,268	+				+1.5
3,294,269	-				-2.5
3,294,297	+				-0.3
3,294,337	-		DZA65_RS15115	0.11	-1.2
3,294,340	+		DZA65_RS15115	0.11	+0.3
3,294,340	+		DZA65_RS15115	0.11	-1.6
3,294,340	+		DZA65_RS15115	0.11	+0.7
3,294,341	-		DZA65_RS15115	0.11	-0.2
3,294,341	-		DZA65_RS15115	0.11	-0.3
3,294,341	-		DZA65_RS15115	0.11	+1.1
3,294,341	-		DZA65_RS15115	0.11	+0.5
3,294,376	-		DZA65_RS15115	0.14	+1.9
3,294,380	+		DZA65_RS15115	0.14	+0.5
3,294,380	+		DZA65_RS15115	0.14	+0.2
3,294,380	+		DZA65_RS15115	0.14	+0.7
3,294,380	+		DZA65_RS15115	0.14	-2.1
3,294,380	+		DZA65_RS15115	0.14	+0.4
3,294,380	+		DZA65_RS15115	0.14	+0.7
3,294,380	+		DZA65_RS15115	0.14	-0.6
3,294,380	+		DZA65_RS15115	0.14	-0.9
3,294,380	+		DZA65_RS15115	0.14	+2.3
3,294,381	-		DZA65_RS15115	0.14	-0.9
3,294,381	-		DZA65_RS15115	0.14	-0.7
3,294,381	-		DZA65_RS15115	0.14	-0.3
3,294,381	-		DZA65_RS15115	0.14	+0.1
3,294,381	-		DZA65_RS15115	0.14	-1.9
3,294,381	-		DZA65_RS15115	0.14	-1.6
3,294,381	-		DZA65_RS15115	0.14	-0.3
3,294,381	-		DZA65_RS15115	0.14	-1.5
3,294,381	-		DZA65_RS15115	0.14	-0.2
3,294,381	-		DZA65_RS15115	0.14	+1.0
3,294,414	-		DZA65_RS15115	0.17	-0.3
3,294,414	-		DZA65_RS15115	0.17	+0.5
3,294,438	+		DZA65_RS15115	0.19	-1.6
3,294,438	+		DZA65_RS15115	0.19	+0.7
3,294,442	+		DZA65_RS15115	0.19	-0.9
3,294,442	+		DZA65_RS15115	0.19	+1.5
3,294,442	+		DZA65_RS15115	0.19	-0.4
3,294,442	+		DZA65_RS15115	0.19	-0.3
3,294,443	-		DZA65_RS15115	0.19	+0.3
3,294,443	-		DZA65_RS15115	0.19	-2.5
3,294,448	+		DZA65_RS15115	0.19	+1.9
3,294,449	-		DZA65_RS15115	0.19	+0.1
3,294,505	+		DZA65_RS15115	0.24	+0.4
3,294,506	-		DZA65_RS15115	0.24	-0.6
3,294,506	-		DZA65_RS15115	0.24	-1.1
3,294,630	+		DZA65_RS15115	0.33	+0.7
3,294,631	-		DZA65_RS15115	0.33	+1.4
3,294,643	-		DZA65_RS15115	0.34	-0.7
3,294,691	-		DZA65_RS15115	0.38	-0.3
3,294,691	-		DZA65_RS15115	0.38	+0.5
3,294,709	+		DZA65_RS15115	0.39	-0.1
3,294,782	+		DZA65_RS15115	0.45	-1.1
3,294,782	+		DZA65_RS15115	0.45	-0.0
3,294,783	-		DZA65_RS15115	0.45	-0.0
3,294,783	-		DZA65_RS15115	0.45	-1.3
3,294,824	+		DZA65_RS15115	0.48	-0.6
3,294,824	+		DZA65_RS15115	0.48	-0.5
3,294,824	+		DZA65_RS15115	0.48	+1.0
3,294,824	+		DZA65_RS15115	0.48	-2.5
3,294,824	+		DZA65_RS15115	0.48	-1.0
3,294,824	+		DZA65_RS15115	0.48	-1.1
3,294,824	+		DZA65_RS15115	0.48	+0.6
3,294,824	+		DZA65_RS15115	0.48	+0.4
3,294,824	+		DZA65_RS15115	0.48	-0.3
3,294,824	+		DZA65_RS15115	0.48	-0.6
3,294,824	+		DZA65_RS15115	0.48	-0.2
3,294,824	+		DZA65_RS15115	0.48	-0.4
3,294,824	+		DZA65_RS15115	0.48	-0.6
3,294,825	-		DZA65_RS15115	0.48	+0.0
3,294,825	-		DZA65_RS15115	0.48	-0.2
3,294,825	-		DZA65_RS15115	0.48	+0.7
3,294,825	-		DZA65_RS15115	0.48	-0.5
3,294,825	-		DZA65_RS15115	0.48	-0.5
3,294,825	-		DZA65_RS15115	0.48	+1.3
3,294,825	-		DZA65_RS15115	0.48	+1.1
3,294,825	-		DZA65_RS15115	0.48	-1.2
3,294,825	-		DZA65_RS15115	0.48	-0.7
3,294,825	-		DZA65_RS15115	0.48	-1.9
3,294,825	-		DZA65_RS15115	0.48	-0.9
3,294,825	-		DZA65_RS15115	0.48	-0.6
3,294,825	-		DZA65_RS15115	0.48	-0.3
3,294,826	+		DZA65_RS15115	0.48	-0.3
3,294,826	+		DZA65_RS15115	0.48	-0.0
3,294,826	+		DZA65_RS15115	0.48	-1.3
3,294,826	+		DZA65_RS15115	0.48	-2.2
3,294,826	+		DZA65_RS15115	0.48	-0.2
3,294,826	+		DZA65_RS15115	0.48	-0.2
3,294,826	+		DZA65_RS15115	0.48	-0.5
3,294,827	-		DZA65_RS15115	0.48	-2.1
3,294,827	-		DZA65_RS15115	0.48	-0.7
3,294,827	-		DZA65_RS15115	0.48	+0.3
3,294,827	-		DZA65_RS15115	0.48	-0.2
3,294,827	-		DZA65_RS15115	0.48	+0.5
3,294,827	-		DZA65_RS15115	0.48	+0.1
3,294,827	-		DZA65_RS15115	0.48	-0.3
3,294,827	-		DZA65_RS15115	0.48	-1.1
3,294,978	-		DZA65_RS15115	0.59	-1.0
3,294,978	-		DZA65_RS15115	0.59	+0.7
3,294,992	+		DZA65_RS15115	0.60	+1.3
3,294,993	-		DZA65_RS15115	0.60	+0.7
3,294,993	-		DZA65_RS15115	0.60	+0.5
3,294,996	+		DZA65_RS15115	0.61	-0.9
3,294,996	+		DZA65_RS15115	0.61	+1.2
3,294,996	+		DZA65_RS15115	0.61	-1.8
3,294,996	+		DZA65_RS15115	0.61	-0.1
3,294,996	+		DZA65_RS15115	0.61	-0.9
3,294,996	+		DZA65_RS15115	0.61	+0.5
3,294,996	+		DZA65_RS15115	0.61	-1.0
3,294,996	+		DZA65_RS15115	0.61	+2.0
3,294,996	+		DZA65_RS15115	0.61	-0.7
3,294,997	-		DZA65_RS15115	0.61	+0.2
3,294,997	-		DZA65_RS15115	0.61	-0.5
3,294,997	-		DZA65_RS15115	0.61	-0.2
3,294,997	-		DZA65_RS15115	0.61	+0.3
3,294,997	-		DZA65_RS15115	0.61	+0.7
3,294,997	-		DZA65_RS15115	0.61	-0.2
3,294,997	-		DZA65_RS15115	0.61	-1.0
3,294,997	-		DZA65_RS15115	0.61	+1.0
3,294,997	-		DZA65_RS15115	0.61	+0.5
3,295,032	-		DZA65_RS15115	0.63	+0.2
3,295,039	-		DZA65_RS15115	0.64	-0.3
3,295,039	-		DZA65_RS15115	0.64	-0.5
3,295,039	-		DZA65_RS15115	0.64	+0.7
3,295,039	-		DZA65_RS15115	0.64	-0.3
3,295,068	+		DZA65_RS15115	0.66	+0.7
3,295,095	-		DZA65_RS15115	0.68	-0.5
3,295,145	+		DZA65_RS15115	0.72	+0.1
3,295,145	+		DZA65_RS15115	0.72	-0.7
3,295,145	+		DZA65_RS15115	0.72	+0.7
3,295,145	+		DZA65_RS15115	0.72	+2.5
3,295,158	+		DZA65_RS15115	0.73	-0.9
3,295,328	-		DZA65_RS15115	0.86	+0.6
3,295,328	-				+0.1
3,295,436	+				+0.7
3,295,455	-				-0.7
3,295,455	-				+0.4
3,295,455	-				-2.5
3,295,455	-				+1.2
3,295,490	+				-0.4
3,295,490	+				-0.3
3,295,491	-				-0.4
3,295,541	+				-0.7
3,295,541	+				+0.7
3,295,542	-				+0.2
3,295,542	-				-0.4
3,295,542	-				-0.3
3,295,597	-				+0.9
3,295,668	-		DZA65_RS15120	0.10	-1.8
3,295,768	+		DZA65_RS15120	0.17	-2.1
3,295,768	+		DZA65_RS15120	0.17	-0.9
3,295,769	-		DZA65_RS15120	0.17	-0.1
3,295,769	-		DZA65_RS15120	0.17	+0.4
3,295,889	+		DZA65_RS15120	0.24	-0.6
3,295,889	+		DZA65_RS15120	0.24	-1.5
3,295,889	+		DZA65_RS15120	0.24	-0.5
3,295,889	+		DZA65_RS15120	0.24	+2.9
3,295,889	+		DZA65_RS15120	0.24	-0.6
3,295,890	-		DZA65_RS15120	0.24	-0.0
3,295,890	-		DZA65_RS15120	0.24	-0.5
3,295,890	-		DZA65_RS15120	0.24	+0.1
3,295,890	-		DZA65_RS15120	0.24	-0.0
3,295,890	-		DZA65_RS15120	0.24	+0.0
3,295,890	-		DZA65_RS15120	0.24	-0.9
3,295,890	-		DZA65_RS15120	0.24	-0.7
3,295,890	-		DZA65_RS15120	0.24	-0.2
3,295,915	+		DZA65_RS15120	0.26	+0.3
3,295,936	+		DZA65_RS15120	0.27	+2.3
3,295,936	+		DZA65_RS15120	0.27	-0.1
3,295,954	+		DZA65_RS15120	0.28	-2.2
3,295,954	+		DZA65_RS15120	0.28	-1.2
3,295,954	+		DZA65_RS15120	0.28	-0.9
3,295,954	+		DZA65_RS15120	0.28	-0.3
3,295,954	+		DZA65_RS15120	0.28	-1.0
3,295,955	-		DZA65_RS15120	0.29	-0.6
3,295,955	-		DZA65_RS15120	0.29	-1.2
3,295,955	-		DZA65_RS15120	0.29	-1.1
3,295,955	-		DZA65_RS15120	0.29	-1.6
3,295,955	-		DZA65_RS15120	0.29	-0.4
3,295,960	+		DZA65_RS15120	0.29	-0.9
3,295,960	+		DZA65_RS15120	0.29	+1.1
3,295,961	-		DZA65_RS15120	0.29	-0.3
3,295,961	-		DZA65_RS15120	0.29	-0.9
3,296,019	+		DZA65_RS15120	0.33	+0.4
3,296,019	+		DZA65_RS15120	0.33	+0.2
3,296,056	+		DZA65_RS15120	0.35	-0.1
3,296,056	+		DZA65_RS15120	0.35	+0.1
3,296,069	+		DZA65_RS15120	0.36	+2.2
3,296,069	+		DZA65_RS15120	0.36	+1.3
3,296,069	+		DZA65_RS15120	0.36	-0.5
3,296,070	-		DZA65_RS15120	0.36	-0.1
3,296,114	-		DZA65_RS15120	0.39	-1.4
3,296,180	+		DZA65_RS15120	0.43	-0.5
3,296,224	+		DZA65_RS15120	0.46	-0.3
3,296,225	-		DZA65_RS15120	0.46	-0.0
3,296,225	-		DZA65_RS15120	0.46	+0.0
3,296,225	-		DZA65_RS15120	0.46	+1.6
3,296,225	-		DZA65_RS15120	0.46	+0.1
3,296,225	-		DZA65_RS15120	0.46	-0.3
3,296,225	-		DZA65_RS15120	0.46	-0.9
3,296,225	-		DZA65_RS15120	0.46	+0.2
3,296,225	-		DZA65_RS15120	0.46	-2.2
3,296,225	-		DZA65_RS15120	0.46	-0.3
3,296,364	+		DZA65_RS15120	0.54	+0.3
3,296,364	+		DZA65_RS15120	0.54	+0.1
3,296,364	+		DZA65_RS15120	0.54	+0.5
3,296,364	+		DZA65_RS15120	0.54	-0.0
3,296,364	+		DZA65_RS15120	0.54	-0.1
3,296,364	+		DZA65_RS15120	0.54	-0.3
3,296,364	+		DZA65_RS15120	0.54	+0.7
3,296,364	+		DZA65_RS15120	0.54	-1.3
3,296,364	+		DZA65_RS15120	0.54	+1.0
3,296,364	+		DZA65_RS15120	0.54	-0.3
3,296,364	+		DZA65_RS15120	0.54	-0.7
3,296,365	-		DZA65_RS15120	0.54	+0.2
3,296,365	-		DZA65_RS15120	0.54	+0.9
3,296,365	-		DZA65_RS15120	0.54	+0.7
3,296,365	-		DZA65_RS15120	0.54	-0.5
3,296,365	-		DZA65_RS15120	0.54	-0.3
3,296,365	-		DZA65_RS15120	0.54	-1.6
3,296,365	-		DZA65_RS15120	0.54	+0.1
3,296,365	-		DZA65_RS15120	0.54	+0.1
3,296,365	-		DZA65_RS15120	0.54	+0.7
3,296,365	-		DZA65_RS15120	0.54	+0.8
3,296,365	-		DZA65_RS15120	0.54	+1.5
3,296,392	-		DZA65_RS15120	0.56	+1.0
3,296,442	+		DZA65_RS15120	0.59	+0.7
3,296,442	+		DZA65_RS15120	0.59	-0.1
3,296,463	+		DZA65_RS15120	0.61	-1.5
3,296,464	-		DZA65_RS15120	0.61	+1.4
3,296,464	-		DZA65_RS15120	0.61	-0.0
3,296,482	+		DZA65_RS15120	0.62	-0.9
3,296,482	+		DZA65_RS15120	0.62	-1.3
3,296,484	+		DZA65_RS15120	0.62	-1.5
3,296,485	-		DZA65_RS15120	0.62	+1.2
3,296,510	+		DZA65_RS15120	0.64	+0.4
3,296,511	-		DZA65_RS15120	0.64	-1.9
3,296,511	-		DZA65_RS15120	0.64	+0.4