Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14750

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
3,208,081	-		DZA65_RS14745	0.65	+0.2
3,208,103	+		DZA65_RS14745	0.66	-1.3
3,208,103	+		DZA65_RS14745	0.66	+1.6
3,208,104	-		DZA65_RS14745	0.66	+0.2
3,208,104	-		DZA65_RS14745	0.66	+0.1
3,208,471	+		DZA65_RS14745	0.80	+0.4
3,208,471	+		DZA65_RS14745	0.80	-0.9
3,208,471	+		DZA65_RS14745	0.80	+0.5
3,208,471	+		DZA65_RS14745	0.80	+0.3
3,208,472	-		DZA65_RS14745	0.80	+0.1
3,208,472	-		DZA65_RS14745	0.80	-0.1
3,208,472	-		DZA65_RS14745	0.80	+0.2
3,208,543	+		DZA65_RS14745	0.83	-0.9
3,208,543	+		DZA65_RS14745	0.83	+1.0
3,208,543	+		DZA65_RS14745	0.83	+0.2
3,208,543	+		DZA65_RS14745	0.83	+0.7
3,208,544	-		DZA65_RS14745	0.83	+0.4
3,208,547	+		DZA65_RS14745	0.83	+0.2
3,208,547	+		DZA65_RS14745	0.83	-0.5
3,208,548	-		DZA65_RS14745	0.83	+0.7
3,208,548	-		DZA65_RS14745	0.83	-1.5
3,208,583	-		DZA65_RS14745	0.84	-0.4
3,208,672	+		DZA65_RS14745	0.88	-0.5
3,208,672	+		DZA65_RS14745	0.88	+0.4
3,208,672	+		DZA65_RS14745	0.88	-1.6
3,208,672	+		DZA65_RS14745	0.88	+1.1
3,208,672	+		DZA65_RS14745	0.88	-0.3
3,208,672	+		DZA65_RS14745	0.88	+0.1
3,208,672	+		DZA65_RS14745	0.88	-0.6
3,208,672	+		DZA65_RS14745	0.88	-0.2
3,208,672	+		DZA65_RS14745	0.88	-0.2
3,208,672	+		DZA65_RS14745	0.88	-0.9
3,208,672	+		DZA65_RS14745	0.88	-0.3
3,208,672	+		DZA65_RS14745	0.88	-0.7
3,208,673	-		DZA65_RS14745	0.88	-0.3
3,208,673	-		DZA65_RS14745	0.88	-1.6
3,208,673	-		DZA65_RS14745	0.88	+0.5
3,208,673	-		DZA65_RS14745	0.88	+1.4
3,208,673	-		DZA65_RS14745	0.88	+2.1
3,208,673	-		DZA65_RS14745	0.88	+0.3
3,208,673	-		DZA65_RS14745	0.88	-0.6
3,208,675	+		DZA65_RS14745	0.88	-0.3
3,208,675	+		DZA65_RS14745	0.88	-0.6
3,208,675	+		DZA65_RS14745	0.88	+0.7
3,208,676	-		DZA65_RS14745	0.88	+0.7
3,208,676	-		DZA65_RS14745	0.88	-0.7
3,208,676	-		DZA65_RS14745	0.88	-0.9
3,208,676	-		DZA65_RS14745	0.88	-0.3
3,208,676	-		DZA65_RS14745	0.88	+1.4
3,208,676	-		DZA65_RS14745	0.88	+0.1
3,208,676	-		DZA65_RS14745	0.88	+0.8
3,208,676	-		DZA65_RS14745	0.88	-0.3
3,208,740	-				-2.0
3,208,740	-				+0.0
3,208,740	-				-2.3
3,208,740	-				+1.7
3,208,966	+				-0.7
3,208,994	+				-1.6
3,208,995	-				+0.8
3,208,995	-				-0.9
3,209,050	+				+1.0
3,209,050	+				+0.2
3,209,050	+				-1.1
3,209,050	+				+1.3
3,209,051	-				-0.0
3,209,051	-				-0.3
3,209,051	-				-0.9
3,209,051	-				+2.3
3,209,051	-				-0.6
3,209,060	+				-0.6
3,209,061	-				-0.4
3,209,061	-				-1.6
3,209,230	+				+2.3
3,209,553	+		DZA65_RS14750	0.13	-0.4
3,209,554	-		DZA65_RS14750	0.13	-0.3
3,209,554	-		DZA65_RS14750	0.13	+1.5
3,209,554	-		DZA65_RS14750	0.13	+0.2
3,209,554	-		DZA65_RS14750	0.13	+0.9
3,209,634	+		DZA65_RS14750	0.15	-0.0
3,209,703	+		DZA65_RS14750	0.17	-2.1
3,209,703	+		DZA65_RS14750	0.17	+0.1
3,209,703	+		DZA65_RS14750	0.17	+0.2
3,209,703	+		DZA65_RS14750	0.17	+1.3
3,209,703	+		DZA65_RS14750	0.17	+1.4
3,209,703	+		DZA65_RS14750	0.17	-0.8
3,209,703	+		DZA65_RS14750	0.17	+1.0
3,209,704	-		DZA65_RS14750	0.17	+0.1
3,209,704	-		DZA65_RS14750	0.17	-0.6
3,209,704	-		DZA65_RS14750	0.17	-0.1
3,209,704	-		DZA65_RS14750	0.17	-0.2
3,209,704	-		DZA65_RS14750	0.17	+0.4
3,209,704	-		DZA65_RS14750	0.17	+1.2
3,209,740	+				-1.3
3,209,808	+		DZA65_RS14750	0.19	-1.9
3,209,808	+		DZA65_RS14750	0.19	+0.7
3,209,808	+		DZA65_RS14750	0.19	+0.7
3,209,809	-		DZA65_RS14750	0.19	+0.7
3,209,809	-		DZA65_RS14750	0.19	+0.2
3,209,809	-		DZA65_RS14750	0.19	+0.2
3,209,809	-		DZA65_RS14750	0.19	-0.4
3,209,809	-		DZA65_RS14750	0.19	+0.8
3,209,809	-		DZA65_RS14750	0.19	-0.5
3,209,809	-		DZA65_RS14750	0.19	-2.3
3,209,809	-		DZA65_RS14750	0.19	-0.2
3,209,929	-		DZA65_RS14750	0.22	+0.0
3,210,141	+		DZA65_RS14750	0.27	+0.1
3,210,141	+		DZA65_RS14750	0.27	-1.8
3,210,141	+		DZA65_RS14750	0.27	-1.9
3,210,141	+		DZA65_RS14750	0.27	-1.1
3,210,141	+		DZA65_RS14750	0.27	+0.2
3,210,142	-		DZA65_RS14750	0.27	+1.5
3,210,142	-		DZA65_RS14750	0.27	-1.5
3,210,142	-		DZA65_RS14750	0.27	-0.5
3,210,142	-		DZA65_RS14750	0.27	+0.6
3,210,142	-		DZA65_RS14750	0.27	-0.1
3,210,150	+		DZA65_RS14750	0.28	+1.3
3,210,228	+		DZA65_RS14750	0.29	+1.3
3,210,228	+		DZA65_RS14750	0.29	-0.5
3,210,229	-		DZA65_RS14750	0.29	+0.1
3,210,284	+		DZA65_RS14750	0.31	-1.6
3,210,284	+		DZA65_RS14750	0.31	+1.1
3,210,284	+		DZA65_RS14750	0.31	+0.7
3,210,284	+		DZA65_RS14750	0.31	-0.8
3,210,285	-		DZA65_RS14750	0.31	+1.0
3,210,285	-		DZA65_RS14750	0.31	-0.5
3,210,285	-		DZA65_RS14750	0.31	+0.1
3,210,285	-		DZA65_RS14750	0.31	+1.2
3,210,285	-		DZA65_RS14750	0.31	-1.1
3,210,306	+		DZA65_RS14750	0.31	-1.5
3,210,306	+		DZA65_RS14750	0.31	-0.8
3,210,307	-		DZA65_RS14750	0.31	+0.7
3,210,307	-		DZA65_RS14750	0.31	-0.9
3,210,307	-		DZA65_RS14750	0.31	+0.5
3,210,307	-		DZA65_RS14750	0.31	-0.5
3,210,432	+		DZA65_RS14750	0.34	-0.9
3,210,433	-		DZA65_RS14750	0.34	+0.1
3,210,433	-		DZA65_RS14750	0.34	+1.5
3,210,479	+		DZA65_RS14750	0.35	+0.2
3,210,508	-				-0.9
3,210,508	-		DZA65_RS14750	0.36	+0.0
3,210,508	-		DZA65_RS14750	0.36	+1.6
3,210,508	-		DZA65_RS14750	0.36	-1.5
3,210,620	-		DZA65_RS14750	0.39	+0.7
3,210,783	+		DZA65_RS14750	0.43	+1.7
3,210,854	-		DZA65_RS14750	0.44	+0.7
3,210,855	+		DZA65_RS14750	0.44	-0.9
3,210,856	-		DZA65_RS14750	0.44	+0.3
3,210,885	+		DZA65_RS14750	0.45	-0.2
3,210,885	+				+0.1
3,210,885	+		DZA65_RS14750	0.45	+1.7
3,210,886	-		DZA65_RS14750	0.45	+0.7
3,210,886	-		DZA65_RS14750	0.45	+0.0
3,210,886	-		DZA65_RS14750	0.45	+0.4
3,210,886	-		DZA65_RS14750	0.45	-0.6
3,210,952	+				-1.3
3,211,491	-		DZA65_RS14750	0.60	-0.8
3,211,552	-		DZA65_RS14750	0.61	+0.7
3,211,552	-		DZA65_RS14750	0.61	-0.3
3,211,709	+		DZA65_RS14750	0.65	+1.1
3,211,709	+		DZA65_RS14750	0.65	-0.4
3,211,710	-		DZA65_RS14750	0.65	+0.0
3,211,710	-		DZA65_RS14750	0.65	-0.7
3,211,710	-		DZA65_RS14750	0.65	+0.2
3,211,710	-		DZA65_RS14750	0.65	-0.7
3,211,710	-		DZA65_RS14750	0.65	+0.9
3,211,783	-		DZA65_RS14750	0.66	+0.7
3,211,806	+		DZA65_RS14750	0.67	+0.1
3,211,832	+		DZA65_RS14750	0.68	-1.5
3,211,832	+		DZA65_RS14750	0.68	+0.1
3,211,832	+		DZA65_RS14750	0.68	+0.9
3,211,832	+		DZA65_RS14750	0.68	+1.4
3,211,846	-		DZA65_RS14750	0.68	-1.2
3,211,913	+		DZA65_RS14750	0.70	-0.4
3,211,914	-		DZA65_RS14750	0.70	+1.1
3,211,914	-		DZA65_RS14750	0.70	-0.5
3,211,930	+		DZA65_RS14750	0.70	-0.4
3,211,930	+		DZA65_RS14750	0.70	-0.0
3,211,931	-		DZA65_RS14750	0.70	-1.1
3,211,931	-		DZA65_RS14750	0.70	-0.6
3,211,950	-		DZA65_RS14750	0.70	-0.7
3,211,970	+		DZA65_RS14750	0.71	+1.0
3,211,970	+		DZA65_RS14750	0.71	-0.6
3,211,971	-		DZA65_RS14750	0.71	-0.3
3,211,971	-		DZA65_RS14750	0.71	-0.3
3,211,971	-		DZA65_RS14750	0.71	-0.3
3,211,971	-		DZA65_RS14750	0.71	+1.3
3,212,105	+		DZA65_RS14750	0.74	+0.3
3,212,192	+		DZA65_RS14750	0.76	+1.9
3,212,192	+		DZA65_RS14750	0.76	-0.7
3,212,192	+		DZA65_RS14750	0.76	+1.5
3,212,192	+		DZA65_RS14750	0.76	-0.2
3,212,193	-		DZA65_RS14750	0.76	-0.3
3,212,193	-		DZA65_RS14750	0.76	+0.3
3,212,193	-		DZA65_RS14750	0.76	+0.7
3,212,193	-		DZA65_RS14750	0.76	+0.1
3,212,241	+		DZA65_RS14750	0.77	+1.4
3,212,242	-		DZA65_RS14750	0.77	+0.1
3,212,361	+		DZA65_RS14750	0.80	-0.4
3,212,361	+		DZA65_RS14750	0.80	+0.1
3,212,361	+		DZA65_RS14750	0.80	-1.1
3,212,362	-		DZA65_RS14750	0.80	-0.6
3,212,362	-		DZA65_RS14750	0.80	-0.2
3,212,362	-		DZA65_RS14750	0.80	-1.3
3,212,557	+		DZA65_RS14750	0.85	-0.0
3,212,898	+				-0.9
3,212,899	-				-0.6
3,213,006	-				+0.2
3,213,006	-				+0.1
3,213,066	+				+0.0
3,213,066	+				-0.0
3,213,066	+				-0.3
3,213,066	+				-1.6
3,213,067	-				+0.3
3,213,137	+				+0.4
3,213,228	+				+0.4
3,213,323	+		DZA65_RS14755	0.15	-0.3
3,213,323	+		DZA65_RS14755	0.15	-0.5
3,213,324	-		DZA65_RS14755	0.15	+0.4
3,213,324	-		DZA65_RS14755	0.15	+0.2
3,213,383	+		DZA65_RS14755	0.23	+2.0
3,213,395	+		DZA65_RS14755	0.24	-0.9
3,213,395	+		DZA65_RS14755	0.24	-0.8
3,213,396	-		DZA65_RS14755	0.24	-3.1
3,213,396	-		DZA65_RS14755	0.24	+0.4
3,213,615	-		DZA65_RS14755	0.52	-1.0
3,213,615	-		DZA65_RS14755	0.52	-0.2
3,213,681	-		DZA65_RS14755	0.60	-0.3
3,213,681	-		DZA65_RS14755	0.60	-2.3
3,213,711	+		DZA65_RS14755	0.64	-1.9
3,213,711	+		DZA65_RS14755	0.64	+0.3
3,213,712	-		DZA65_RS14755	0.64	+0.3
3,213,712	-		DZA65_RS14755	0.64	-0.7
3,213,718	+		DZA65_RS14755	0.65	+1.0
3,213,719	-		DZA65_RS14755	0.65	-1.1
3,213,719	-		DZA65_RS14755	0.65	+0.1
3,213,749	+		DZA65_RS14755	0.68	+0.7
3,213,749	+		DZA65_RS14755	0.68	+1.0
3,213,749	+		DZA65_RS14755	0.68	-2.6
3,213,749	+		DZA65_RS14755	0.68	-0.6
3,213,749	+		DZA65_RS14755	0.68	-1.1
3,213,750	-		DZA65_RS14755	0.69	+0.1
3,213,753	-		DZA65_RS14755	0.69	+0.7
3,213,883	+		DZA65_RS14755	0.85	+0.0
3,213,884	-		DZA65_RS14755	0.85	-0.0
3,214,000	+				-1.3
3,214,001	-				-0.3
3,214,024	+				+0.5
3,214,024	+				-0.8
3,214,025	-				+1.7
3,214,065	+				-1.6
3,214,065	+				-2.3
3,214,066	-				-0.5
3,214,066	-				-0.9
3,214,066	-				-0.4