Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13645

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
2,928,268	-				-0.0
2,928,279	-				-1.0
2,928,279	-				+2.2
2,928,279	-				-1.2
2,928,317	-				+0.3
2,928,317	-				+1.0
2,928,317	-				-1.5
2,928,345	-				-1.4
2,928,345	-				+2.2
2,928,345	-				-0.8
2,928,345	-				+0.4
2,928,345	-				+1.6
2,928,394	-		DZA65_RS13640	0.14	-0.4
2,928,394	-		DZA65_RS13640	0.14	+1.3
2,928,394	-		DZA65_RS13640	0.14	+0.0
2,928,394	-		DZA65_RS13640	0.14	+0.9
2,928,473	+		DZA65_RS13640	0.23	-2.2
2,928,474	-		DZA65_RS13640	0.24	-0.4
2,928,474	-		DZA65_RS13640	0.24	+1.6
2,928,474	-		DZA65_RS13640	0.24	-2.0
2,928,474	-		DZA65_RS13640	0.24	+0.6
2,928,474	-		DZA65_RS13640	0.24	-0.0
2,928,476	+		DZA65_RS13640	0.24	-1.2
2,928,476	+		DZA65_RS13640	0.24	-0.4
2,928,476	+		DZA65_RS13640	0.24	-0.4
2,928,476	+		DZA65_RS13640	0.24	+0.9
2,928,476	+		DZA65_RS13640	0.24	+1.3
2,928,476	+		DZA65_RS13640	0.24	-1.7
2,928,477	-				+2.6
2,928,477	-		DZA65_RS13640	0.24	-1.5
2,928,477	-		DZA65_RS13640	0.24	+0.6
2,928,477	-		DZA65_RS13640	0.24	-1.0
2,928,477	-		DZA65_RS13640	0.24	+0.6
2,928,477	-		DZA65_RS13640	0.24	+0.1
2,928,553	-		DZA65_RS13640	0.33	-1.2
2,928,553	-		DZA65_RS13640	0.33	-1.2
2,928,558	-		DZA65_RS13640	0.34	+1.2
2,928,663	+		DZA65_RS13640	0.47	-0.2
2,928,664	-		DZA65_RS13640	0.47	+1.0
2,928,664	-		DZA65_RS13640	0.47	-1.0
2,928,664	-		DZA65_RS13640	0.47	-0.4
2,928,664	-		DZA65_RS13640	0.47	-0.2
2,928,664	-		DZA65_RS13640	0.47	-0.7
2,928,664	-		DZA65_RS13640	0.47	-0.4
2,928,664	-		DZA65_RS13640	0.47	-2.3
2,928,664	-		DZA65_RS13640	0.47	+0.5
2,928,664	-		DZA65_RS13640	0.47	+0.1
2,928,664	-		DZA65_RS13640	0.47	+0.1
2,928,751	+		DZA65_RS13640	0.58	+0.6
2,928,751	+				+1.9
2,928,752	-		DZA65_RS13640	0.58	+0.6
2,928,752	-		DZA65_RS13640	0.58	-0.0
2,928,752	-		DZA65_RS13640	0.58	+1.1
2,928,752	-		DZA65_RS13640	0.58	-0.5
2,928,752	-		DZA65_RS13640	0.58	+1.0
2,928,752	-		DZA65_RS13640	0.58	-0.8
2,928,752	-		DZA65_RS13640	0.58	-0.1
2,928,752	-		DZA65_RS13640	0.58	-0.8
2,928,752	-		DZA65_RS13640	0.58	+0.0
2,928,777	-		DZA65_RS13640	0.61	-0.7
2,928,777	-		DZA65_RS13640	0.61	-0.1
2,928,782	+		DZA65_RS13640	0.62	+0.6
2,928,782	+		DZA65_RS13640	0.62	+1.2
2,928,782	+		DZA65_RS13640	0.62	+1.0
2,928,782	+		DZA65_RS13640	0.62	+0.6
2,928,782	+		DZA65_RS13640	0.62	+1.0
2,928,782	+		DZA65_RS13640	0.62	+0.9
2,928,782	+		DZA65_RS13640	0.62	-0.4
2,928,782	+		DZA65_RS13640	0.62	-2.2
2,928,782	+		DZA65_RS13640	0.62	+0.2
2,928,782	+		DZA65_RS13640	0.62	-0.6
2,928,782	+		DZA65_RS13640	0.62	-0.2
2,928,782	+		DZA65_RS13640	0.62	+0.1
2,928,782	+		DZA65_RS13640	0.62	-2.8
2,928,782	+		DZA65_RS13640	0.62	-0.2
2,928,783	-		DZA65_RS13640	0.62	+0.2
2,928,783	-		DZA65_RS13640	0.62	+0.4
2,928,783	-		DZA65_RS13640	0.62	+0.9
2,928,783	-		DZA65_RS13640	0.62	+0.6
2,928,783	-		DZA65_RS13640	0.62	-1.0
2,928,783	-		DZA65_RS13640	0.62	+0.6
2,928,783	-		DZA65_RS13640	0.62	+0.7
2,928,783	-		DZA65_RS13640	0.62	-0.5
2,928,783	-		DZA65_RS13640	0.62	+0.1
2,928,783	-		DZA65_RS13640	0.62	-0.0
2,928,783	-		DZA65_RS13640	0.62	+0.0
2,928,783	-		DZA65_RS13640	0.62	-1.2
2,928,783	-		DZA65_RS13640	0.62	-0.2
2,928,783	-		DZA65_RS13640	0.62	-0.2
2,928,783	-		DZA65_RS13640	0.62	-0.4
2,928,783	-		DZA65_RS13640	0.62	-2.2
2,928,783	-		DZA65_RS13640	0.62	-0.2
2,928,783	-		DZA65_RS13640	0.62	-0.7
2,928,783	-		DZA65_RS13640	0.62	-1.5
2,928,783	-		DZA65_RS13640	0.62	-0.6
2,928,783	-		DZA65_RS13640	0.62	-0.6
2,928,786	+		DZA65_RS13640	0.62	-0.4
2,928,930	+		DZA65_RS13640	0.80	-2.0
2,928,931	-		DZA65_RS13640	0.80	-0.0
2,928,931	-		DZA65_RS13640	0.80	+0.2
2,928,931	-		DZA65_RS13640	0.80	+1.0
2,928,962	+		DZA65_RS13640	0.84	-1.5
2,928,963	-		DZA65_RS13640	0.84	-0.1
2,928,963	-		DZA65_RS13640	0.84	+0.2
2,928,984	-		DZA65_RS13640	0.87	+0.9
2,929,032	+				-2.5
2,929,033	-				-0.8
2,929,033	-				+0.6
2,929,088	+				+1.8
2,929,088	+				-0.6
2,929,088	+				-0.2
2,929,088	+				+1.0
2,929,088	+				-1.4
2,929,088	+				-0.3
2,929,088	+				-0.0
2,929,089	-				-1.0
2,929,089	-				+0.2
2,929,089	-				-0.6
2,929,089	-				+2.2
2,929,089	-				-0.8
2,929,089	-				-0.1
2,929,089	-				-0.3
2,929,089	-				+0.1
2,929,089	-				+1.0
2,929,089	-				-0.2
2,929,089	-				-1.3
2,929,201	+				+1.6
2,929,202	-				-0.7
2,929,202	-				-1.2
2,929,266	+				-1.0
2,929,389	+		DZA65_RS13645	0.14	-1.7
2,929,537	-		DZA65_RS13645	0.26	-1.1
2,929,537	-		DZA65_RS13645	0.26	+0.0
2,929,553	+		DZA65_RS13645	0.27	-1.5
2,929,572	+		DZA65_RS13645	0.29	-1.0
2,929,575	+		DZA65_RS13645	0.29	+0.2
2,929,649	+		DZA65_RS13645	0.35	-0.4
2,929,722	-		DZA65_RS13645	0.41	-0.5
2,929,896	+		DZA65_RS13645	0.55	-0.7
2,929,896	+		DZA65_RS13645	0.55	-0.1
2,929,897	-		DZA65_RS13645	0.55	-2.4
2,929,911	+		DZA65_RS13645	0.56	+0.3
2,929,921	-		DZA65_RS13645	0.57	-0.8
2,929,960	-		DZA65_RS13645	0.60	-0.0
2,930,037	+		DZA65_RS13645	0.67	-1.5
2,930,038	-		DZA65_RS13645	0.67	-0.2
2,930,395	-				-1.2
2,930,411	-				-0.6
2,930,434	+				-0.2
2,930,435	-				-0.4
2,930,493	-				+0.5
2,930,505	-				-0.3
2,930,505	-				-1.2
2,930,939	-				-1.5
2,930,939	-				+0.2
2,930,939	-				-1.1
2,930,939	-				-2.5
2,930,939	-				-1.0
2,930,939	-				-1.0
2,930,939	-				-1.5
2,930,939	-				-0.4
2,930,939	-				-0.7
2,930,939	-				-1.4
2,930,939	-				-1.0
2,930,939	-				-0.3