Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13370

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
2,862,747	+		DZA65_RS13365	0.37	-0.4
2,862,747	+		DZA65_RS13365	0.37	+0.5
2,862,747	+		DZA65_RS13365	0.37	+0.4
2,862,747	+		DZA65_RS13365	0.37	+0.0
2,862,747	+		DZA65_RS13365	0.37	+0.9
2,862,748	-		DZA65_RS13365	0.37	-0.8
2,862,820	+		DZA65_RS13365	0.42	-1.0
2,862,820	+		DZA65_RS13365	0.42	+2.1
2,862,820	+		DZA65_RS13365	0.42	+0.6
2,862,820	+		DZA65_RS13365	0.42	-1.4
2,862,820	+		DZA65_RS13365	0.42	+0.0
2,862,821	-		DZA65_RS13365	0.43	-0.8
2,863,015	+		DZA65_RS13365	0.58	-0.6
2,863,015	+		DZA65_RS13365	0.58	-2.4
2,863,015	+		DZA65_RS13365	0.58	+1.3
2,863,015	+		DZA65_RS13365	0.58	+0.2
2,863,016	-		DZA65_RS13365	0.58	-0.4
2,863,017	+		DZA65_RS13365	0.58	-1.0
2,863,017	+		DZA65_RS13365	0.58	+0.4
2,863,017	+		DZA65_RS13365	0.58	+0.6
2,863,017	+		DZA65_RS13365	0.58	-0.4
2,863,017	+		DZA65_RS13365	0.58	+0.3
2,863,017	+		DZA65_RS13365	0.58	+1.6
2,863,018	-		DZA65_RS13365	0.58	-0.7
2,863,018	-		DZA65_RS13365	0.58	-0.5
2,863,018	-		DZA65_RS13365	0.58	-0.2
2,863,018	-		DZA65_RS13365	0.58	+1.3
2,863,018	-		DZA65_RS13365	0.58	-0.1
2,863,018	-		DZA65_RS13365	0.58	-0.4
2,863,018	-		DZA65_RS13365	0.58	-0.2
2,863,018	-		DZA65_RS13365	0.58	+0.8
2,863,018	-		DZA65_RS13365	0.58	+0.8
2,863,018	-		DZA65_RS13365	0.58	-0.6
2,863,018	-				+0.0
2,863,039	+				+0.3
2,863,053	+		DZA65_RS13365	0.61	+0.4
2,863,054	-		DZA65_RS13365	0.61	+1.1
2,863,260	+		DZA65_RS13365	0.77	+2.3
2,863,260	+		DZA65_RS13365	0.77	+0.3
2,863,261	-		DZA65_RS13365	0.77	-3.0
2,863,261	-		DZA65_RS13365	0.77	-1.0
2,863,261	-		DZA65_RS13365	0.77	+0.8
2,863,378	+		DZA65_RS13365	0.86	+0.9
2,863,516	+				+0.2
2,863,516	+				-1.0
2,863,516	+				-1.4
2,863,516	+				-0.7
2,863,516	+				+1.7
2,863,516	+				-0.5
2,863,516	+				-0.4
2,863,516	+				-0.8
2,863,516	+				+1.1
2,863,516	+				-0.4
2,863,516	+				-2.4
2,863,517	-				+0.4
2,863,517	-				-2.6
2,863,517	-				+0.0
2,863,517	-				-0.5
2,863,517	-				+0.6
2,863,517	-				+0.9
2,863,517	-				-0.7
2,863,517	-				-0.1
2,863,517	-				-1.6
2,863,517	-				+1.0
2,863,517	-				-0.2
2,863,527	+				-0.6
2,863,528	-				-0.4
2,863,528	-				+0.2
2,863,656	+				-1.1
2,863,656	+				+0.3
2,863,656	+				-0.8
2,863,656	+				+0.5
2,863,656	+				-0.3
2,863,657	-				-0.4
2,863,657	-				-1.8
2,863,686	+				+0.6
2,863,686	+				+0.0
2,863,686	+				-0.8
2,863,686	+				-2.0
2,863,686	+				-1.6
2,863,896	+				-1.2
2,863,896	+				-1.7
2,863,905	-				+0.8
2,863,905	-				-0.1
2,863,942	+		DZA65_RS13370	0.11	-0.8
2,863,942	+		DZA65_RS13370	0.11	+0.6
2,863,942	+		DZA65_RS13370	0.11	+0.0
2,863,942	+		DZA65_RS13370	0.11	+0.2
2,863,942	+		DZA65_RS13370	0.11	-1.0
2,863,943	-		DZA65_RS13370	0.11	+0.5
2,863,943	-		DZA65_RS13370	0.11	-1.4
2,863,967	+		DZA65_RS13370	0.12	-0.1
2,864,000	+		DZA65_RS13370	0.14	-1.0
2,864,000	+		DZA65_RS13370	0.14	-1.1
2,864,000	+		DZA65_RS13370	0.14	+1.4
2,864,001	-		DZA65_RS13370	0.14	-1.7
2,864,001	-		DZA65_RS13370	0.14	+1.2
2,864,043	+		DZA65_RS13370	0.16	-1.0
2,864,044	-		DZA65_RS13370	0.16	+1.9
2,864,044	-		DZA65_RS13370	0.16	-0.2
2,864,096	-		DZA65_RS13370	0.19	-2.4
2,864,108	-		DZA65_RS13370	0.20	-0.2
2,864,108	-		DZA65_RS13370	0.20	+1.0
2,864,159	+		DZA65_RS13370	0.22	+0.0
2,864,159	+		DZA65_RS13370	0.22	+0.0
2,864,159	+		DZA65_RS13370	0.22	+0.2
2,864,159	+		DZA65_RS13370	0.22	+1.0
2,864,160	-		DZA65_RS13370	0.22	-0.4
2,864,261	+		DZA65_RS13370	0.28	+0.0
2,864,261	+		DZA65_RS13370	0.28	-0.8
2,864,261	+		DZA65_RS13370	0.28	-0.2
2,864,261	+		DZA65_RS13370	0.28	+1.0
2,864,262	-		DZA65_RS13370	0.28	-2.8
2,864,262	-		DZA65_RS13370	0.28	+0.2
2,864,262	-		DZA65_RS13370	0.28	+0.6
2,864,262	-		DZA65_RS13370	0.28	-1.4
2,864,507	-		DZA65_RS13370	0.40	-0.2
2,864,507	-		DZA65_RS13370	0.40	+0.0
2,864,625	-		DZA65_RS13370	0.46	-1.1
2,864,683	+		DZA65_RS13370	0.49	-0.7
2,864,684	-		DZA65_RS13370	0.49	-0.4
2,864,709	+		DZA65_RS13370	0.51	-1.5
2,864,709	+		DZA65_RS13370	0.51	+0.0
2,864,709	+		DZA65_RS13370	0.51	-0.1
2,864,710	-		DZA65_RS13370	0.51	+0.6
2,864,710	-		DZA65_RS13370	0.51	+0.1
2,864,941	+		DZA65_RS13370	0.63	-0.5
2,864,941	+		DZA65_RS13370	0.63	-1.3
2,864,941	+		DZA65_RS13370	0.63	-2.2
2,864,941	+		DZA65_RS13370	0.63	-0.5
2,864,942	-		DZA65_RS13370	0.63	+0.3
2,864,942	-		DZA65_RS13370	0.63	-0.8
2,864,975	+		DZA65_RS13370	0.64	-1.2
2,865,008	+		DZA65_RS13370	0.66	+0.0
2,865,008	+		DZA65_RS13370	0.66	+0.4
2,865,008	+		DZA65_RS13370	0.66	-0.7
2,865,009	-		DZA65_RS13370	0.66	-2.7
2,865,098	+		DZA65_RS13370	0.71	-2.2
2,865,099	-		DZA65_RS13370	0.71	-1.2
2,865,361	+		DZA65_RS13370	0.84	-0.1
2,865,361	+		DZA65_RS13370	0.84	+0.1
2,865,362	-		DZA65_RS13370	0.84	+1.8
2,865,362	-		DZA65_RS13370	0.84	-0.7
2,865,478	+				+1.2
2,865,479	-				-0.3
2,865,504	+				+1.2
2,865,567	+				+0.0
2,865,567	+				+3.2
2,865,567	+				+0.7
2,865,568	-				+0.2
2,865,587	+				+0.3
2,865,650	+				-0.4
2,865,650	+				-3.1
2,865,650	+				+1.8
2,865,650	+				+1.4
2,865,651	-				-0.1
2,865,651	-				-0.5
2,865,651	-				+1.6
2,865,665	+				-0.7
2,865,665	+				+0.6
2,865,665	+				+1.6
2,865,665	+				+0.2
2,865,666	-				+0.3
2,865,666	-				-1.4
2,865,666	-				+0.0
2,865,666	-				+2.3
2,865,666	-				-1.0
2,865,666	-				+0.2
2,865,666	-				+1.5
2,865,666	-				-1.0
2,865,666	-				-1.4
2,865,669	+				-0.7
2,865,669	+				-0.7
2,865,830	+				-0.1
2,865,830	+				+0.4
2,865,831	-				-1.2
2,865,896	+		DZA65_RS13375	0.11	+1.0
2,865,896	+		DZA65_RS13375	0.11	-0.8
2,865,896	+		DZA65_RS13375	0.11	-0.2
2,865,897	-		DZA65_RS13375	0.11	+0.5
2,865,897	-		DZA65_RS13375	0.11	+0.2
2,865,897	-		DZA65_RS13375	0.11	-1.4
2,865,897	-		DZA65_RS13375	0.11	-0.3
2,865,897	-		DZA65_RS13375	0.11	-1.3
2,866,071	+		DZA65_RS13375	0.19	+0.5
2,866,072	-		DZA65_RS13375	0.19	+1.3
2,866,072	-		DZA65_RS13375	0.19	+2.2
2,866,127	+		DZA65_RS13375	0.22	-1.0
2,866,127	+				+0.6
2,866,127	+		DZA65_RS13375	0.22	-1.3
2,866,128	-		DZA65_RS13375	0.22	+0.3
2,866,128	-		DZA65_RS13375	0.22	-0.3
2,866,146	+		DZA65_RS13375	0.22	-0.5
2,866,147	-		DZA65_RS13375	0.23	-0.6
2,866,195	+		DZA65_RS13375	0.25	-1.5
2,866,196	-		DZA65_RS13375	0.25	-0.6
2,866,196	-		DZA65_RS13375	0.25	-1.2
2,866,239	+		DZA65_RS13375	0.27	-1.4
2,866,240	-		DZA65_RS13375	0.27	-0.7
2,866,240	-		DZA65_RS13375	0.27	+2.2
2,866,281	-		DZA65_RS13375	0.29	-1.6
2,866,318	-		DZA65_RS13375	0.31	-0.5
2,866,458	+		DZA65_RS13375	0.37	+1.8
2,866,458	+		DZA65_RS13375	0.37	-0.6
2,866,506	+		DZA65_RS13375	0.39	+0.1
2,866,506	+		DZA65_RS13375	0.39	-0.4
2,866,506	+		DZA65_RS13375	0.39	-0.4
2,866,507	-		DZA65_RS13375	0.39	+0.4
2,866,507	-		DZA65_RS13375	0.39	-2.2
2,866,528	-		DZA65_RS13375	0.40	-1.7
2,866,536	+		DZA65_RS13375	0.41	+1.9