Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13070

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
2,803,838	-		DZA65_RS13065	0.82	-1.1
2,803,938	+		DZA65_RS13065	0.86	+0.1
2,804,033	+		DZA65_RS13065	0.90	-1.4
2,804,118	+				-0.4
2,804,119	-				-1.6
2,804,189	+				+0.3
2,804,189	+				+0.0
2,804,189	+				+1.4
2,804,190	-				+0.2
2,804,198	+				-0.7
2,804,198	+				-2.2
2,804,198	+				+0.6
2,804,198	+				-1.2
2,804,199	-				-1.3
2,804,243	-				-0.2
2,804,385	+				+0.1
2,804,386	-				-0.4
2,804,411	-				-0.4
2,804,411	-				-0.4
2,804,444	+				-0.0
2,804,444	+				-0.1
2,804,444	+				+0.3
2,804,444	+				+1.6
2,804,444	+				+0.4
2,804,445	-				+0.9
2,804,445	-				-0.2
2,804,445	-				+1.3
2,804,448	+				+0.6
2,804,448	+				+0.8
2,804,449	-				+0.9
2,804,449	-				+1.2
2,804,460	-				+0.0
2,804,465	+				-1.6
2,804,465	+				+0.0
2,804,465	+				+0.8
2,804,466	-				+0.9
2,804,466	-				+0.5
2,804,470	+				+0.2
2,804,470	+				-0.4
2,804,470	+				+2.1
2,804,470	+				-0.7
2,804,470	+				-1.7
2,804,470	+				+0.0
2,804,470	+				-0.3
2,804,471	-				+0.7
2,804,471	-				+0.1
2,804,471	-				+0.7
2,804,471	-				-0.1
2,804,475	+				-0.1
2,804,475	+				-0.9
2,804,476	-				-1.4
2,804,499	+				+0.1
2,804,520	-				-2.0
2,804,520	-				+0.1
2,804,566	+				-2.0
2,804,566	+				+2.6
2,804,567	-				-1.1
2,804,567	-				+1.9
2,804,567	-				+0.6
2,804,567	-				+0.9
2,804,583	-				+0.2
2,804,641	+				+0.7
2,804,648	-				+1.3
2,804,648	-				+0.2
2,804,684	+				+1.2
2,804,684	+				-1.0
2,804,686	+				+1.2
2,804,686	+				-0.7
2,804,687	-				-0.2
2,804,692	+				-0.5
2,804,692	+				-1.2
2,804,693	-				-1.4
2,804,723	-				+0.1
2,804,740	+				-2.4
2,804,741	-				+2.2
2,804,798	+				+0.6
2,804,798	+				-0.5
2,804,799	-				-0.7
2,804,799	-				-0.9
2,804,802	-				+0.6
2,804,802	-				-1.0
2,804,833	+				+0.2
2,804,833	+				+0.7
2,804,834	-				-1.0
2,804,836	+				+0.2
2,804,836	+				-0.4
2,804,836	+				-0.6
2,804,837	-				-0.3
2,804,837	-				-1.6
2,804,915	+		DZA65_RS13070	0.20	+1.2
2,804,915	+		DZA65_RS13070	0.20	+0.9
2,804,915	+		DZA65_RS13070	0.20	+1.0
2,804,916	-		DZA65_RS13070	0.21	+0.1
2,804,916	-		DZA65_RS13070	0.21	-0.6
2,804,916	-		DZA65_RS13070	0.21	+0.1
2,804,919	+		DZA65_RS13070	0.21	+1.4
2,804,919	+		DZA65_RS13070	0.21	-0.1
2,804,919	+		DZA65_RS13070	0.21	-0.7
2,804,920	-		DZA65_RS13070	0.21	+0.2
2,804,920	-		DZA65_RS13070	0.21	-0.3
2,804,920	-		DZA65_RS13070	0.21	+0.0
2,804,925	+		DZA65_RS13070	0.22	+0.2
2,804,926	-		DZA65_RS13070	0.22	-0.8
2,805,002	+		DZA65_RS13070	0.35	+0.9
2,805,002	+		DZA65_RS13070	0.35	-1.6
2,805,003	-		DZA65_RS13070	0.35	+1.3
2,805,003	-		DZA65_RS13070	0.35	+0.6
2,805,026	+		DZA65_RS13070	0.39	+0.2
2,805,026	+		DZA65_RS13070	0.39	-0.4
2,805,026	+		DZA65_RS13070	0.39	+0.8
2,805,027	-		DZA65_RS13070	0.39	+0.2
2,805,027	-		DZA65_RS13070	0.39	+1.3
2,805,027	-		DZA65_RS13070	0.39	-0.6
2,805,027	-		DZA65_RS13070	0.39	-0.7
2,805,027	-		DZA65_RS13070	0.39	-0.7
2,805,028	+		DZA65_RS13070	0.39	+2.2
2,805,029	-		DZA65_RS13070	0.39	-0.3
2,805,029	-		DZA65_RS13070	0.39	+1.3
2,805,029	-		DZA65_RS13070	0.39	-1.4
2,805,029	-		DZA65_RS13070	0.39	+1.2
2,805,029	-		DZA65_RS13070	0.39	-1.4
2,805,086	+		DZA65_RS13070	0.48	+0.2
2,805,086	+		DZA65_RS13070	0.48	-0.4
2,805,086	+		DZA65_RS13070	0.48	+0.0
2,805,149	+		DZA65_RS13070	0.59	-0.1
2,805,149	+		DZA65_RS13070	0.59	+0.6
2,805,150	-		DZA65_RS13070	0.59	+0.1
2,805,150	-		DZA65_RS13070	0.59	-0.8
2,805,170	+		DZA65_RS13070	0.62	+1.0
2,805,205	-		DZA65_RS13070	0.68	+1.2
2,805,205	-		DZA65_RS13070	0.68	+0.7
2,805,205	-		DZA65_RS13070	0.68	-0.4
2,805,221	+		DZA65_RS13070	0.70	+0.4
2,805,257	+		DZA65_RS13070	0.76	+0.6
2,805,257	+		DZA65_RS13070	0.76	-1.8
2,805,258	-		DZA65_RS13070	0.76	+0.5
2,805,258	-		DZA65_RS13070	0.76	+1.0
2,805,329	+				+0.2
2,805,330	-		DZA65_RS13070	0.88	+0.6
2,805,398	+				+0.5
2,805,399	-				-0.6
2,805,399	-				-1.0
2,805,399	-				-0.3
2,805,414	+				-1.2
2,805,551	+				+0.2
2,805,551	+				-0.4
2,805,551	+				-0.2
2,805,551	+				+0.4
2,805,552	-				-0.4
2,805,552	-				+0.0
2,805,587	+		DZA65_RS13075	0.13	-0.1
2,805,587	+		DZA65_RS13075	0.13	+0.6
2,805,587	+		DZA65_RS13075	0.13	-0.7
2,805,587	+		DZA65_RS13075	0.13	-0.5
2,805,587	+		DZA65_RS13075	0.13	-0.6
2,805,587	+		DZA65_RS13075	0.13	-0.4
2,805,587	+		DZA65_RS13075	0.13	-1.4
2,805,587	+		DZA65_RS13075	0.13	+1.1
2,805,588	-		DZA65_RS13075	0.13	+0.3
2,805,588	-		DZA65_RS13075	0.13	-2.3
2,805,723	+		DZA65_RS13075	0.28	-0.1
2,805,790	+		DZA65_RS13075	0.36	-1.2
2,805,790	+		DZA65_RS13075	0.36	+1.4
2,805,791	-		DZA65_RS13075	0.36	-0.8
2,805,791	-		DZA65_RS13075	0.36	+0.0
2,805,942	+		DZA65_RS13075	0.54	+0.6
2,805,942	+		DZA65_RS13075	0.54	+0.6
2,805,942	+		DZA65_RS13075	0.54	+1.6
2,805,942	+		DZA65_RS13075	0.54	-0.6
2,805,943	-		DZA65_RS13075	0.54	-0.4
2,806,016	+		DZA65_RS13075	0.62	+0.6
2,806,016	+		DZA65_RS13075	0.62	-0.6
2,806,016	+		DZA65_RS13075	0.62	+0.0
2,806,092	+		DZA65_RS13075	0.71	-1.7
2,806,094	+		DZA65_RS13075	0.72	+0.6
2,806,094	+				-0.7
2,806,094	+		DZA65_RS13075	0.72	-0.7
2,806,095	-		DZA65_RS13075	0.72	+0.6
2,806,202	+		DZA65_RS13075	0.84	+1.0
2,806,203	-		DZA65_RS13075	0.84	-2.6
2,806,210	-		DZA65_RS13075	0.85	+0.2
2,806,210	-		DZA65_RS13075	0.85	-1.0
2,806,327	+				+0.4
2,806,327	+				-0.3
2,806,327	+				-1.4
2,806,327	+				-0.4
2,806,328	-				+1.6
2,806,328	-				+0.3
2,806,328	-				+0.2
2,806,348	+				+0.5
2,806,349	-				-0.4
2,806,377	+				-1.6
2,806,377	+				+0.6
2,806,377	+				-1.2
2,806,377	+				-1.4
2,806,378	-				+0.0
2,806,378	-				+0.8
2,806,380	+				-0.6
2,806,381	-				-0.1
2,806,381	-				+0.3
2,806,402	+				-0.1