Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09730

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
2,051,734	-				-0.2
2,051,734	-				+0.2
2,051,734	-				-0.8
2,051,734	-				-0.7
2,051,737	+				+0.0
2,051,737	+				+0.5
2,051,737	+				-0.2
2,051,738	-				-0.4
2,051,738	-				+0.2
2,051,738	-				-1.5
2,051,738	-				+0.2
2,051,738	-				+1.3
2,051,743	-				+1.8
2,051,743	-				+0.5
2,051,753	+				-1.2
2,051,754	-				+0.1
2,051,755	+				-1.6
2,051,755	+				-0.2
2,051,755	+				-0.2
2,051,756	-				+1.9
2,051,756	-				-0.2
2,051,756	-				+0.3
2,051,756	-				+0.5
2,051,756	-				-0.8
2,051,756	-				-1.3
2,051,756	-				-0.9
2,051,756	-				+0.0
2,051,756	-				-0.4
2,051,756	-				-0.3
2,051,853	+		DZA65_RS09725	0.11	-0.8
2,051,853	+		DZA65_RS09725	0.11	+0.0
2,051,854	-				+0.5
2,051,884	+		DZA65_RS09725	0.15	-0.5
2,051,890	+		DZA65_RS09725	0.16	-0.8
2,051,890	+		DZA65_RS09725	0.16	+0.2
2,051,891	-		DZA65_RS09725	0.16	+1.1
2,051,927	+		DZA65_RS09725	0.20	+0.3
2,051,957	+		DZA65_RS09725	0.24	+0.7
2,051,957	+		DZA65_RS09725	0.24	-0.9
2,051,957	+		DZA65_RS09725	0.24	-0.5
2,051,957	+		DZA65_RS09725	0.24	-1.6
2,051,957	+		DZA65_RS09725	0.24	-2.5
2,051,957	+		DZA65_RS09725	0.24	-1.6
2,051,958	-		DZA65_RS09725	0.24	+0.7
2,051,958	-		DZA65_RS09725	0.24	+1.3
2,051,958	-		DZA65_RS09725	0.24	-1.1
2,052,023	+		DZA65_RS09725	0.32	-1.1
2,052,023	+		DZA65_RS09725	0.32	+0.2
2,052,023	+		DZA65_RS09725	0.32	+0.8
2,052,023	+		DZA65_RS09725	0.32	-0.3
2,052,024	-		DZA65_RS09725	0.32	-0.8
2,052,024	-		DZA65_RS09725	0.32	-0.5
2,052,074	-		DZA65_RS09725	0.38	-1.0
2,052,101	+		DZA65_RS09725	0.41	+1.2
2,052,101	+		DZA65_RS09725	0.41	+0.8
2,052,102	-		DZA65_RS09725	0.41	+0.4
2,052,262	+		DZA65_RS09725	0.60	-0.5
2,052,262	+		DZA65_RS09725	0.60	-0.5
2,052,323	-		DZA65_RS09725	0.67	-0.7
2,052,485	-		DZA65_RS09725	0.86	-1.2
2,052,509	+		DZA65_RS09725	0.89	-0.3
2,052,599	+				-1.8
2,052,600	-				+0.9
2,052,600	-				+0.5
2,052,600	-				-0.2
2,052,603	-				+0.5
2,052,610	+				+0.3
2,052,610	+				-1.8
2,052,664	-				+0.8
2,052,664	-				+1.0
2,052,664	-				+0.8
2,052,745	-				-0.6
2,052,751	+				-0.4
2,052,886	+		DZA65_RS09730	0.15	-0.5
2,052,886	+		DZA65_RS09730	0.15	-0.9
2,052,887	-		DZA65_RS09730	0.15	+0.5
2,052,889	+		DZA65_RS09730	0.15	+0.3
2,052,890	-		DZA65_RS09730	0.15	-0.1
2,052,890	-		DZA65_RS09730	0.15	+0.6
2,052,890	-		DZA65_RS09730	0.15	+1.5
2,052,890	-		DZA65_RS09730	0.15	-1.8
2,052,890	-		DZA65_RS09730	0.15	-0.5
2,053,025	+		DZA65_RS09730	0.29	+1.5
2,053,025	+		DZA65_RS09730	0.29	-0.5
2,053,025	+		DZA65_RS09730	0.29	-1.6
2,053,025	+		DZA65_RS09730	0.29	-0.3
2,053,025	+		DZA65_RS09730	0.29	-0.2
2,053,025	+		DZA65_RS09730	0.29	+0.8
2,053,026	-		DZA65_RS09730	0.29	+3.3
2,053,026	-		DZA65_RS09730	0.29	+0.1
2,053,026	-		DZA65_RS09730	0.29	-0.1
2,053,026	-		DZA65_RS09730	0.29	+0.5
2,053,026	-				+2.1
2,053,026	-		DZA65_RS09730	0.29	+2.8
2,053,026	-		DZA65_RS09730	0.29	-1.3
2,053,027	+		DZA65_RS09730	0.29	+0.2
2,053,284	+		DZA65_RS09730	0.54	-0.1
2,053,418	-		DZA65_RS09730	0.67	-0.1
2,053,622	+		DZA65_RS09730	0.87	+0.5
2,053,622	+		DZA65_RS09730	0.87	-0.6
2,053,622	+		DZA65_RS09730	0.87	-1.5
2,053,623	-		DZA65_RS09730	0.87	+0.3
2,053,623	-		DZA65_RS09730	0.87	-0.7
2,053,623	-		DZA65_RS09730	0.87	+1.1
2,053,623	-		DZA65_RS09730	0.87	-1.5
2,053,623	-		DZA65_RS09730	0.87	-0.8
2,053,623	-		DZA65_RS09730	0.87	-0.7
2,053,623	-		DZA65_RS09730	0.87	-0.5
2,053,624	+		DZA65_RS09730	0.88	+0.1
2,053,624	+		DZA65_RS09730	0.88	-1.6
2,053,798	+				-0.6
2,053,798	+				-0.1
2,053,799	-				+0.5
2,053,799	-				-0.7
2,053,802	+				-0.3
2,053,802	+				-2.5
2,053,802	+				-0.1
2,053,803	-				-0.5
2,053,854	+		DZA65_RS09735	0.17	+1.8
2,053,854	+		DZA65_RS09735	0.17	+0.2
2,053,854	+		DZA65_RS09735	0.17	-0.8
2,053,855	-		DZA65_RS09735	0.17	+0.1
2,053,855	-		DZA65_RS09735	0.17	-0.5
2,053,855	-		DZA65_RS09735	0.17	+1.0
2,053,855	-		DZA65_RS09735	0.17	-0.6
2,053,873	+		DZA65_RS09735	0.20	+0.3
2,053,873	+		DZA65_RS09735	0.20	+0.9
2,053,873	+		DZA65_RS09735	0.20	+0.4
2,053,874	-		DZA65_RS09735	0.20	+0.5
2,053,874	-				+1.1
2,053,874	-		DZA65_RS09735	0.20	+0.0
2,053,874	-		DZA65_RS09735	0.20	+1.4
2,053,922	+		DZA65_RS09735	0.27	+0.2
2,053,922	+		DZA65_RS09735	0.27	-0.9
2,053,922	+		DZA65_RS09735	0.27	-0.6
2,053,923	-		DZA65_RS09735	0.27	-2.7
2,053,923	-		DZA65_RS09735	0.27	+1.3
2,053,926	-		DZA65_RS09735	0.28	+0.2
2,053,957	+		DZA65_RS09735	0.32	-0.2
2,053,957	+		DZA65_RS09735	0.32	-1.4
2,053,957	+		DZA65_RS09735	0.32	-2.6
2,053,957	+		DZA65_RS09735	0.32	+1.8
2,053,958	-		DZA65_RS09735	0.32	+0.8
2,054,049	+				+0.5
2,054,049	+		DZA65_RS09735	0.46	-0.4
2,054,049	+		DZA65_RS09735	0.46	+0.3
2,054,050	-		DZA65_RS09735	0.46	-1.0
2,054,050	-		DZA65_RS09735	0.46	-0.5
2,054,050	-		DZA65_RS09735	0.46	-0.6
2,054,050	-		DZA65_RS09735	0.46	-0.5
2,054,050	-		DZA65_RS09735	0.46	+0.5
2,054,290	-		DZA65_RS09735	0.83	-0.1
2,054,302	+		DZA65_RS09735	0.84	-1.1
2,054,303	-		DZA65_RS09735	0.84	+0.5
2,054,338	+		DZA65_RS09735	0.90	+0.4
2,054,338	+		DZA65_RS09735	0.90	-0.7
2,054,344	+				-0.6
2,054,344	+				+0.2
2,054,345	-				-0.5
2,054,345	-				-1.2
2,054,345	-				+0.9
2,054,347	+				-0.2
2,054,347	+				-0.1
2,054,347	+				+0.0
2,054,347	+				+1.1
2,054,347	+				-0.5
2,054,348	-				-0.6
2,054,348	-				-1.2
2,054,348	-				+1.5
2,054,348	-				-0.5
2,054,415	-				-1.1
2,054,592	+		DZA65_RS09740	0.13	-1.1
2,054,595	-		DZA65_RS09740	0.14	+0.5
2,054,631	-		DZA65_RS09740	0.18	+0.5