Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09660

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
2,031,925	-		DZA65_RS09655	0.35	-0.0
2,031,925	-		DZA65_RS09655	0.35	-0.1
2,031,940	+		DZA65_RS09655	0.36	-0.7
2,031,940	+		DZA65_RS09655	0.36	+0.8
2,032,109	-		DZA65_RS09655	0.51	-0.0
2,032,240	+		DZA65_RS09655	0.63	+0.1
2,032,240	+				+1.5
2,032,240	+		DZA65_RS09655	0.63	+0.0
2,032,240	+		DZA65_RS09655	0.63	+2.5
2,032,240	+		DZA65_RS09655	0.63	-1.0
2,032,241	-		DZA65_RS09655	0.63	+1.5
2,032,241	-		DZA65_RS09655	0.63	-0.8
2,032,241	-		DZA65_RS09655	0.63	+0.5
2,032,242	+		DZA65_RS09655	0.63	-0.9
2,032,242	+		DZA65_RS09655	0.63	+0.1
2,032,242	+		DZA65_RS09655	0.63	+0.9
2,032,242	+		DZA65_RS09655	0.63	-1.0
2,032,242	+		DZA65_RS09655	0.63	+0.1
2,032,243	-		DZA65_RS09655	0.63	-0.8
2,032,243	-		DZA65_RS09655	0.63	-1.0
2,032,243	-		DZA65_RS09655	0.63	-0.9
2,032,243	-		DZA65_RS09655	0.63	-0.7
2,032,243	-		DZA65_RS09655	0.63	+2.2
2,032,243	-		DZA65_RS09655	0.63	+0.8
2,032,243	-		DZA65_RS09655	0.63	-0.7
2,032,243	-		DZA65_RS09655	0.63	-1.0
2,032,243	-		DZA65_RS09655	0.63	-0.8
2,032,383	+		DZA65_RS09655	0.76	-0.0
2,032,384	-		DZA65_RS09655	0.76	-0.2
2,032,384	-		DZA65_RS09655	0.76	-1.0
2,032,384	-		DZA65_RS09655	0.76	+0.7
2,032,512	+		DZA65_RS09655	0.87	+0.2
2,032,512	+		DZA65_RS09655	0.87	-0.8
2,032,512	+		DZA65_RS09655	0.87	-0.4
2,032,512	+		DZA65_RS09655	0.87	-1.6
2,032,513	-		DZA65_RS09655	0.87	-0.5
2,032,513	-		DZA65_RS09655	0.87	-1.3
2,032,513	-		DZA65_RS09655	0.87	-0.6
2,032,684	-				-1.0
2,032,698	+				+0.5
2,032,699	-				-0.7
2,032,699	-				+1.2
2,032,704	+		DZA65_RS22855	0.11	-1.5
2,032,704	+		DZA65_RS22855	0.11	-0.0
2,032,705	-		DZA65_RS22855	0.11	+1.2
2,032,717	-		DZA65_RS22855	0.18	-1.3
2,032,723	-		DZA65_RS22855	0.22	-0.3
2,032,729	-		DZA65_RS22855	0.25	-0.3
2,032,729	-		DZA65_RS22855	0.25	+0.5
2,032,740	+		DZA65_RS22855	0.32	+0.8
2,032,740	+		DZA65_RS22855	0.32	-1.0
2,032,784	+		DZA65_RS22855	0.57	-1.8
2,032,785	-		DZA65_RS22855	0.57	-0.0
2,032,818	+		DZA65_RS22855	0.76	-1.5
2,032,818	+		DZA65_RS22855	0.76	-0.9
2,032,818	+		DZA65_RS22855	0.76	-0.6
2,032,818	+		DZA65_RS22855	0.76	-1.6
2,032,818	+		DZA65_RS22855	0.76	+0.7
2,032,818	+		DZA65_RS22855	0.76	-1.5
2,032,818	+		DZA65_RS22855	0.76	-1.0
2,032,818	+		DZA65_RS22855	0.76	-1.5
2,032,819	-		DZA65_RS22855	0.77	-0.0
2,032,819	-		DZA65_RS22855	0.77	-0.5
2,032,819	-		DZA65_RS22855	0.77	-0.0
2,032,819	-		DZA65_RS22855	0.77	+1.2
2,032,819	-		DZA65_RS22855	0.77	+0.3
2,032,847	+				+1.3
2,032,847	+				+0.2
2,032,847	+				+0.9
2,032,863	+				-0.4
2,032,863	+				-0.0
2,032,863	+				+0.5
2,032,864	-				-0.2
2,032,879	+				-1.5
2,032,941	+				+0.5
2,032,941	+				-1.3
2,032,941	+				+0.4
2,032,942	-				+0.0
2,032,942	-				-0.3
2,033,081	+				-0.9
2,033,081	+		DZA65_RS09660	0.25	-1.0
2,033,082	-		DZA65_RS09660	0.26	-0.0
2,033,290	-		DZA65_RS09660	0.49	+0.2
2,033,317	+		DZA65_RS09660	0.52	-0.3
2,033,318	-		DZA65_RS09660	0.53	+0.2
2,033,333	-		DZA65_RS09660	0.54	-0.8
2,033,390	+		DZA65_RS09660	0.61	-0.5
2,033,403	-		DZA65_RS09660	0.62	+1.5
2,033,456	-		DZA65_RS09660	0.68	-1.5
2,033,523	+		DZA65_RS09660	0.76	-0.4
2,033,523	+		DZA65_RS09660	0.76	-0.6
2,033,524	-		DZA65_RS09660	0.76	-0.0
2,033,524	-		DZA65_RS09660	0.76	-0.3
2,033,524	-		DZA65_RS09660	0.76	-1.3
2,033,524	-		DZA65_RS09660	0.76	-0.3
2,033,524	-		DZA65_RS09660	0.76	-0.5
2,033,534	+		DZA65_RS09660	0.77	-0.5
2,033,534	+		DZA65_RS09660	0.77	+0.2
2,033,535	-		DZA65_RS09660	0.77	-1.9
2,033,712	+				-0.7
2,033,712	+				+0.2
2,033,712	+				+1.2
2,033,712	+				+0.2
2,033,712	+				-1.0
2,033,712	+				-2.5
2,033,712	+				-0.3
2,033,712	+				+0.9
2,033,712	+				-1.5
2,033,712	+				+0.2
2,033,712	+				-0.1
2,033,712	+				-1.0
2,033,712	+				-0.3
2,033,713	-				-1.0
2,033,713	-				+0.2
2,033,713	-				-0.0
2,033,713	-				-1.2
2,033,713	-				+0.2
2,033,713	-				+0.1
2,033,713	-				-0.5
2,033,713	-				-1.0
2,033,906	-				-1.3
2,033,917	+				-1.1
2,033,917	+				-0.7
2,033,917	+				-0.1
2,033,917	+				+0.6
2,033,918	-				+1.8
2,033,918	-				+0.3
2,033,918	-				+0.2
2,033,918	-				-1.5
2,033,919	+				+0.5
2,033,919	+				-1.5
2,033,919	+				+0.8
2,033,919	+				+0.4
2,033,919	+				-0.3
2,033,919	+				-0.1
2,033,919	+				-0.7
2,033,919	+				+1.7
2,033,919	+				+0.2
2,033,919	+				-1.5
2,033,919	+				+0.1
2,033,919	+				+2.1
2,033,919	+				+1.5
2,033,919	+				+0.2
2,033,919	+				+1.0
2,033,919	+				-0.0
2,033,919	+				+0.3
2,033,919	+				+0.0
2,033,919	+				+0.2
2,033,919	+				-0.6
2,033,919	+				-0.5
2,033,919	+				-0.3
2,033,920	-				+0.0
2,033,920	-				+0.5
2,033,920	-				+0.8
2,033,920	-				-0.5
2,033,920	-				+1.3
2,033,920	-				-0.0
2,033,920	-				+1.5
2,033,920	-				-0.0
2,033,920	-				+0.2
2,033,920	-				+0.8
2,033,920	-				+0.8
2,033,920	-				-0.4
2,033,920	-				-0.2
2,033,920	-				+1.1
2,033,920	-				-0.6
2,033,920	-				+0.9
2,033,920	-				-1.0
2,033,920	-				+2.1
2,033,920	-				+0.3
2,033,920	-				+0.1
2,033,920	-				-1.0
2,033,920	-				+0.8
2,033,924	-				-0.9
2,033,924	-				-0.8
2,033,924	-				+0.5
2,033,924	-				-0.5
2,033,924	-				-0.0
2,033,924	-				+0.5
2,034,006	+				-0.4
2,034,046	+				-0.0
2,034,048	+				-0.9
2,034,050	+				-0.5
2,034,050	+				-1.0
2,034,050	+				-1.6
2,034,050	+				-1.0
2,034,050	+				-0.3
2,034,050	+				-1.6
2,034,063	+				-0.8
2,034,064	-				-0.2
2,034,096	+				+0.8
2,034,096	+				+0.4
2,034,096	+				-0.9
2,034,096	+				-0.0
2,034,096	+				+0.3
2,034,097	-				-0.5
2,034,097	-				+1.0
2,034,097	-				-0.5
2,034,101	+				+0.1
2,034,102	-				-0.0
2,034,102	-				+0.5
2,034,102	-				-1.4
2,034,142	+				-1.0
2,034,149	-				+0.2
2,034,183	+				-0.9
2,034,183	+				+2.1
2,034,184	-				-1.2
2,034,210	+				+0.6
2,034,211	-				+1.5
2,034,211	-				+0.7
2,034,211	-				+1.5
2,034,221	+				+1.2
2,034,221	+				+0.1
2,034,221	+				-0.9
2,034,221	+				-0.5
2,034,222	-				+0.5
2,034,222	-				-0.7
2,034,222	-				+1.1
2,034,222	-				-0.4
2,034,222	-				+1.2
2,034,320	+				-0.1
2,034,321	-				-0.2
2,034,321	-				+0.1
2,034,321	-				+0.9
2,034,366	+				+0.5
2,034,366	+				-0.8
2,034,366	+				-0.7
2,034,367	-				-0.5
2,034,367	-				+0.5
2,034,367	-				-0.2
2,034,375	+				+0.5
2,034,379	+				-0.6
2,034,379	+				-1.7
2,034,379	+				+0.4
2,034,380	-				-0.9
2,034,380	-				+0.5
2,034,380	-				-1.1
2,034,380	-				-0.8
2,034,452	+				-0.8
2,034,452	+				-0.5
2,034,452	+				+1.2
2,034,453	-				+0.1
2,034,453	-				-0.3
2,034,453	-				+0.4
2,034,484	+				-0.5
2,034,485	-				+0.3
2,034,485	-				+0.4
2,034,507	+				-0.5
2,034,507	+				-0.1
2,034,508	-				-0.7
2,034,513	+				-0.5
2,034,513	+				-1.1
2,034,513	+				+0.3
2,034,514	-				+0.0
2,034,514	-				-0.2
2,034,526	+				+0.1
2,034,527	-				+0.1
2,034,553	+				+1.5
2,034,553	+				-1.1
2,034,554	-				-0.5
2,034,556	+				+0.0
2,034,556	+				-1.2
2,034,557	-				-0.3
2,034,560	-				-0.1
2,034,570	+				-0.7
2,034,571	-				-0.3
2,034,571	-				+0.0
2,034,571	-				+2.7
2,034,574	+				-0.0
2,034,588	+				+1.0
2,034,588	+				-1.5
2,034,682	+		DZA65_RS09670	0.13	-1.1
2,034,682	+		DZA65_RS09670	0.13	+0.4
2,034,683	-		DZA65_RS09670	0.13	-0.1