Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09600

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
2,018,194	+		DZA65_RS09595	0.38	+0.2
2,018,222	+		DZA65_RS09595	0.39	-1.3
2,018,222	+		DZA65_RS09595	0.39	-1.0
2,018,222	+		DZA65_RS09595	0.39	-1.0
2,018,223	-		DZA65_RS09595	0.40	+0.5
2,018,223	-		DZA65_RS09595	0.40	-0.4
2,018,357	+		DZA65_RS09595	0.49	+0.3
2,018,357	+		DZA65_RS09595	0.49	+0.1
2,018,357	+		DZA65_RS09595	0.49	-0.2
2,018,358	-		DZA65_RS09595	0.49	-0.5
2,018,358	-		DZA65_RS09595	0.49	+0.8
2,018,358	-		DZA65_RS09595	0.49	-1.8
2,018,358	-		DZA65_RS09595	0.49	+1.0
2,018,406	+		DZA65_RS09595	0.52	+0.7
2,018,406	+		DZA65_RS09595	0.52	-2.5
2,018,406	+		DZA65_RS09595	0.52	-0.1
2,018,406	+		DZA65_RS09595	0.52	-0.5
2,018,408	+		DZA65_RS09595	0.52	-0.9
2,018,409	-		DZA65_RS09595	0.52	-0.9
2,018,445	+		DZA65_RS09595	0.55	+0.4
2,018,445	+		DZA65_RS09595	0.55	+0.5
2,018,598	+		DZA65_RS09595	0.65	-0.2
2,018,598	+		DZA65_RS09595	0.65	+0.0
2,018,598	+		DZA65_RS09595	0.65	+0.2
2,018,598	+		DZA65_RS09595	0.65	+0.3
2,018,598	+		DZA65_RS09595	0.65	+0.7
2,018,598	+		DZA65_RS09595	0.65	-2.0
2,018,598	+		DZA65_RS09595	0.65	-1.8
2,018,599	-		DZA65_RS09595	0.65	+0.5
2,018,599	-		DZA65_RS09595	0.65	+0.5
2,018,599	-				-0.5
2,018,599	-		DZA65_RS09595	0.65	-1.3
2,018,599	-		DZA65_RS09595	0.65	+0.1
2,018,599	-		DZA65_RS09595	0.65	+0.1
2,018,599	-		DZA65_RS09595	0.65	+1.7
2,018,599	-		DZA65_RS09595	0.65	-0.2
2,018,599	-		DZA65_RS09595	0.65	+1.5
2,018,599	-		DZA65_RS09595	0.65	-0.9
2,018,599	-		DZA65_RS09595	0.65	+1.8
2,018,599	-		DZA65_RS09595	0.65	-1.8
2,018,599	-		DZA65_RS09595	0.65	-0.2
2,018,622	-		DZA65_RS09595	0.67	+1.7
2,018,622	-		DZA65_RS09595	0.67	+0.2
2,018,697	+		DZA65_RS09595	0.72	-0.0
2,018,697	+		DZA65_RS09595	0.72	+0.2
2,018,697	+		DZA65_RS09595	0.72	+1.2
2,018,698	-		DZA65_RS09595	0.72	-0.0
2,018,698	-		DZA65_RS09595	0.72	+0.9
2,018,698	-		DZA65_RS09595	0.72	+0.5
2,018,760	+		DZA65_RS09595	0.76	+0.1
2,018,761	-		DZA65_RS09595	0.76	-0.6
2,018,761	-		DZA65_RS09595	0.76	+0.3
2,018,761	-		DZA65_RS09595	0.76	+0.7
2,018,777	+		DZA65_RS09595	0.77	+0.7
2,018,777	+		DZA65_RS09595	0.77	+0.5
2,018,778	-		DZA65_RS09595	0.77	-0.9
2,018,847	+		DZA65_RS09595	0.82	-0.8
2,018,847	+		DZA65_RS09595	0.82	+0.4
2,018,848	-		DZA65_RS09595	0.82	-0.0
2,018,848	-		DZA65_RS09595	0.82	-0.0
2,018,940	-		DZA65_RS09595	0.88	-0.5
2,018,959	-		DZA65_RS09595	0.89	-2.0
2,019,009	+				+1.0
2,019,009	+				-0.5
2,019,009	+				-1.0
2,019,009	+				+0.1
2,019,009	+				+0.2
2,019,009	+				+0.6
2,019,009	+				+0.8
2,019,010	-				-0.0
2,019,010	-				-0.8
2,019,010	-				+0.0
2,019,077	-				-1.2
2,019,077	-				-0.3
2,019,081	+				+0.9
2,019,082	-				-1.0
2,019,107	+				-0.0
2,019,107	+				+0.1
2,019,107	+				-0.2
2,019,108	-				+0.3
2,019,111	+				+0.4
2,019,175	+				-0.2
2,019,229	-				+1.5
2,019,283	-				+0.0
2,019,326	+		DZA65_RS09600	0.11	+1.1
2,019,327	-		DZA65_RS09600	0.11	+0.2
2,019,413	+		DZA65_RS09600	0.18	-0.0
2,019,413	+		DZA65_RS09600	0.18	+1.5
2,019,414	-		DZA65_RS09600	0.19	-0.3
2,019,414	-		DZA65_RS09600	0.19	+0.9
2,019,588	+		DZA65_RS09600	0.33	+1.5
2,019,589	-		DZA65_RS09600	0.33	+1.3
2,019,596	-		DZA65_RS09600	0.34	-0.1
2,019,596	-		DZA65_RS09600	0.34	+0.4
2,019,688	+		DZA65_RS09600	0.42	+0.0
2,019,688	+		DZA65_RS09600	0.42	-0.3
2,019,688	+		DZA65_RS09600	0.42	+0.1
2,019,690	+		DZA65_RS09600	0.42	+0.2
2,019,690	+		DZA65_RS09600	0.42	+0.0
2,019,690	+		DZA65_RS09600	0.42	+0.5
2,019,690	+		DZA65_RS09600	0.42	-2.3
2,019,690	+		DZA65_RS09600	0.42	+0.1
2,019,690	+		DZA65_RS09600	0.42	+2.0
2,019,690	+		DZA65_RS09600	0.42	-0.5
2,019,691	-		DZA65_RS09600	0.42	-0.1
2,019,691	-		DZA65_RS09600	0.42	+0.4
2,019,691	-		DZA65_RS09600	0.42	+0.2
2,019,691	-		DZA65_RS09600	0.42	-2.0
2,019,691	-		DZA65_RS09600	0.42	+0.8
2,019,691	-		DZA65_RS09600	0.42	+1.1
2,019,691	-		DZA65_RS09600	0.42	+0.9
2,019,691	-		DZA65_RS09600	0.42	+0.7
2,019,691	-		DZA65_RS09600	0.42	+0.1
2,019,696	+		DZA65_RS09600	0.42	+0.4
2,019,697	-		DZA65_RS09600	0.42	-0.0
2,019,723	-		DZA65_RS09600	0.45	+0.1
2,019,738	+		DZA65_RS09600	0.46	-1.6
2,019,738	+		DZA65_RS09600	0.46	+0.5
2,019,738	+		DZA65_RS09600	0.46	-1.2
2,019,738	+		DZA65_RS09600	0.46	-0.5
2,019,739	-		DZA65_RS09600	0.46	-0.8
2,019,894	+		DZA65_RS09600	0.59	+2.3
2,019,894	+		DZA65_RS09600	0.59	-0.2
2,019,895	-		DZA65_RS09600	0.59	-0.5
2,019,895	-		DZA65_RS09600	0.59	+0.9
2,019,895	-		DZA65_RS09600	0.59	-1.6
2,019,929	+		DZA65_RS09600	0.62	+2.7
2,020,067	-		DZA65_RS09600	0.73	+1.0
2,020,078	+		DZA65_RS09600	0.74	-0.0
2,020,117	+		DZA65_RS09600	0.78	+0.2
2,020,117	+		DZA65_RS09600	0.78	-0.5
2,020,147	+		DZA65_RS09600	0.80	-0.5
2,020,160	-		DZA65_RS09600	0.81	-0.3
2,020,212	+		DZA65_RS09600	0.86	-0.5
2,020,212	+		DZA65_RS09600	0.86	+0.5
2,020,213	-		DZA65_RS09600	0.86	+1.0
2,020,213	-		DZA65_RS09600	0.86	+0.0
2,020,213	-		DZA65_RS09600	0.86	-0.1
2,020,382	-				+1.2
2,020,382	-				-1.0
2,020,382	-				-0.0
2,020,401	-				+0.8
2,020,403	+				+1.2
2,020,403	+				+0.2
2,020,404	-				-1.4
2,020,421	+				-0.2
2,020,421	+				+0.4
2,020,421	+				-1.5
2,020,422	-				+0.1
2,020,422	-				+0.2
2,020,422	-				+0.8
2,020,427	-				-1.3
2,020,427	-				-0.5
2,020,541	-				+1.0
2,020,541	-				+2.0
2,020,623	-				+1.5
2,020,643	+				+0.5
2,020,679	+				+1.1
2,020,715	+				-0.4
2,020,961	+				-0.5
2,021,021	-				-1.8
2,021,075	-				-1.8
2,021,120	+				-0.8
2,021,144	-				-0.5
2,021,295	+		DZA65_RS09605	0.18	+0.5
2,021,337	+		DZA65_RS09605	0.22	+1.1
2,021,359	-		DZA65_RS09605	0.24	-0.2
2,021,364	-		DZA65_RS09605	0.24	-0.3