Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09560

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
2,008,141	-		DZA65_RS09550	0.12	-0.1
2,008,295	+		DZA65_RS09550	0.39	-0.3
2,008,296	-		DZA65_RS09550	0.39	-0.3
2,008,296	-		DZA65_RS09550	0.39	+1.1
2,008,327	+		DZA65_RS09550	0.44	-0.2
2,008,328	-		DZA65_RS09550	0.45	+0.5
2,008,366	+		DZA65_RS09550	0.51	+0.4
2,008,366	+		DZA65_RS09550	0.51	-0.2
2,008,366	+		DZA65_RS09550	0.51	-0.1
2,008,366	+		DZA65_RS09550	0.51	+0.2
2,008,367	-		DZA65_RS09550	0.51	+3.5
2,008,367	-		DZA65_RS09550	0.51	-0.7
2,008,367	-		DZA65_RS09550	0.51	+0.4
2,008,368	+		DZA65_RS09550	0.51	-0.5
2,008,368	+		DZA65_RS09550	0.51	-1.3
2,008,368	+		DZA65_RS09550	0.51	-2.8
2,008,368	+		DZA65_RS09550	0.51	-0.7
2,008,369	-		DZA65_RS09550	0.52	+0.5
2,008,377	+		DZA65_RS09550	0.53	+0.8
2,008,377	+		DZA65_RS09550	0.53	+0.5
2,008,377	+		DZA65_RS09550	0.53	+0.9
2,008,377	+		DZA65_RS09550	0.53	+0.7
2,008,377	+		DZA65_RS09550	0.53	-1.8
2,008,378	-		DZA65_RS09550	0.53	-1.6
2,008,378	-		DZA65_RS09550	0.53	+0.1
2,008,378	-		DZA65_RS09550	0.53	-1.0
2,008,378	-		DZA65_RS09550	0.53	+0.7
2,008,393	+		DZA65_RS09550	0.56	-0.8
2,008,394	-		DZA65_RS09550	0.56	-0.8
2,008,401	+		DZA65_RS09550	0.57	-0.7
2,008,401	+		DZA65_RS09550	0.57	+1.3
2,008,401	+		DZA65_RS09550	0.57	-0.5
2,008,401	+		DZA65_RS09550	0.57	-1.8
2,008,401	+		DZA65_RS09550	0.57	-1.0
2,008,401	+		DZA65_RS09550	0.57	+0.5
2,008,401	+		DZA65_RS09550	0.57	-0.5
2,008,401	+		DZA65_RS09550	0.57	-1.5
2,008,401	+		DZA65_RS09550	0.57	-0.3
2,008,401	+		DZA65_RS09550	0.57	+1.4
2,008,401	+		DZA65_RS09550	0.57	-0.1
2,008,402	-		DZA65_RS09550	0.57	+0.2
2,008,402	-		DZA65_RS09550	0.57	-1.8
2,008,402	-		DZA65_RS09550	0.57	-0.0
2,008,402	-		DZA65_RS09550	0.57	+1.1
2,008,402	-		DZA65_RS09550	0.57	-2.6
2,008,402	-		DZA65_RS09550	0.57	+0.4
2,008,402	-		DZA65_RS09550	0.57	-1.5
2,008,417	+		DZA65_RS09550	0.60	-1.5
2,008,417	+		DZA65_RS09550	0.60	+0.3
2,008,418	-		DZA65_RS09550	0.60	-1.0
2,008,418	-		DZA65_RS09550	0.60	+0.5
2,008,419	+		DZA65_RS09550	0.60	-1.5
2,008,419	+		DZA65_RS09550	0.60	+0.3
2,008,419	+		DZA65_RS09550	0.60	-0.0
2,008,419	+		DZA65_RS09550	0.60	+0.8
2,008,419	+		DZA65_RS09550	0.60	-1.5
2,008,419	+		DZA65_RS09550	0.60	+0.2
2,008,420	-		DZA65_RS09550	0.61	+0.5
2,008,420	-		DZA65_RS09550	0.61	+0.0
2,008,420	-		DZA65_RS09550	0.61	-0.6
2,008,429	+		DZA65_RS09550	0.62	+0.4
2,008,430	-		DZA65_RS09550	0.62	-0.7
2,008,466	-		DZA65_RS09550	0.69	-0.1
2,008,490	+		DZA65_RS09550	0.73	+0.3
2,008,490	+		DZA65_RS09550	0.73	+1.1
2,008,490	+		DZA65_RS09550	0.73	-0.1
2,008,490	+		DZA65_RS09550	0.73	-0.3
2,008,491	-		DZA65_RS09550	0.73	+1.5
2,008,530	+		DZA65_RS09550	0.80	+0.1
2,008,530	+		DZA65_RS09550	0.80	+0.1
2,008,530	+		DZA65_RS09550	0.80	+0.6
2,008,531	-		DZA65_RS09550	0.80	+0.1
2,008,531	-		DZA65_RS09550	0.80	-0.8
2,008,531	-		DZA65_RS09550	0.80	+0.4
2,008,574	-		DZA65_RS09550	0.87	-0.5
2,008,602	+				-0.6
2,008,603	-				+1.7
2,008,603	-				+0.1
2,008,603	-				+0.7
2,008,652	+				+0.8
2,008,652	+				+0.7
2,008,652	+				+2.0
2,008,652	+				-0.3
2,008,652	+				-0.5
2,008,652	+				-1.3
2,008,653	-				-0.8
2,008,653	-				+1.1
2,008,653	-				-1.3
2,008,653	-				-0.3
2,008,653	-				+1.9
2,008,653	-				+1.9
2,008,653	-				+2.1
2,008,658	-				+0.5
2,008,658	-				+0.4
2,008,661	-				-0.1
2,008,702	+				-2.0
2,008,702	+				-0.7
2,008,702	+				+0.9
2,008,758	+				+0.2
2,008,785	-				+1.1
2,008,827	-				+0.6
2,008,827	-				+0.5
2,008,865	+		DZA65_RS09555	0.13	-0.0
2,008,877	+		DZA65_RS09555	0.17	-0.5
2,008,877	+		DZA65_RS09555	0.17	+0.5
2,008,877	+		DZA65_RS09555	0.17	+0.1
2,008,877	+		DZA65_RS09555	0.17	-0.7
2,008,878	-		DZA65_RS09555	0.18	-2.3
2,008,878	-		DZA65_RS09555	0.18	+0.3
2,008,878	-		DZA65_RS09555	0.18	-1.7
2,008,922	+		DZA65_RS09555	0.35	+0.2
2,008,923	-		DZA65_RS09555	0.35	+0.3
2,008,949	+		DZA65_RS09555	0.45	-0.5
2,008,949	+		DZA65_RS09555	0.45	+0.2
2,008,950	-		DZA65_RS09555	0.46	+0.0
2,008,950	-		DZA65_RS09555	0.46	+0.0
2,009,052	+		DZA65_RS09555	0.86	+0.3
2,009,052	+		DZA65_RS09555	0.86	-1.6
2,009,057	+		DZA65_RS09555	0.88	-2.0
2,009,058	-		DZA65_RS09555	0.88	+0.9
2,009,058	-		DZA65_RS09555	0.88	+0.5
2,009,066	-				-0.1
2,009,170	-				+0.1
2,009,213	-		DZA65_RS09560	0.10	+0.1
2,009,213	-		DZA65_RS09560	0.10	-0.2
2,009,290	-		DZA65_RS09560	0.17	+0.4
2,009,290	-		DZA65_RS09560	0.17	+1.0
2,009,389	-		DZA65_RS09560	0.25	-0.0
2,009,434	+		DZA65_RS09560	0.29	-0.9
2,009,434	+		DZA65_RS09560	0.29	-0.0
2,009,435	-				-1.0
2,009,435	-		DZA65_RS09560	0.29	+1.9
2,009,438	+		DZA65_RS09560	0.29	+0.0
2,009,438	+		DZA65_RS09560	0.29	-0.3
2,009,439	-		DZA65_RS09560	0.29	+0.3
2,009,508	-		DZA65_RS09560	0.35	+0.1
2,009,528	+		DZA65_RS09560	0.37	+0.5
2,009,550	+		DZA65_RS09560	0.39	-0.1
2,009,551	-		DZA65_RS09560	0.39	+1.0
2,009,551	-		DZA65_RS09560	0.39	-1.5
2,009,561	-		DZA65_RS09560	0.40	+1.1
2,009,571	+		DZA65_RS09560	0.40	-0.0
2,009,572	-		DZA65_RS09560	0.41	+1.7
2,009,572	-		DZA65_RS09560	0.41	-1.5
2,009,572	-		DZA65_RS09560	0.41	+0.5
2,009,576	-		DZA65_RS09560	0.41	-0.2
2,009,599	+		DZA65_RS09560	0.43	+1.0
2,009,600	-		DZA65_RS09560	0.43	-0.4
2,009,608	+		DZA65_RS09560	0.44	+0.5
2,009,609	-		DZA65_RS09560	0.44	+0.1
2,009,623	+		DZA65_RS09560	0.45	+0.1
2,009,668	+		DZA65_RS09560	0.49	+0.1
2,009,669	-		DZA65_RS09560	0.49	-0.0
2,009,696	+		DZA65_RS09560	0.51	+1.8
2,009,729	+		DZA65_RS09560	0.54	+0.1
2,009,749	-		DZA65_RS09560	0.55	+0.2
2,009,749	-		DZA65_RS09560	0.55	-1.3
2,009,961	+		DZA65_RS09560	0.73	+1.0
2,009,962	-		DZA65_RS09560	0.74	+0.2
2,009,962	-		DZA65_RS09560	0.74	-1.2
2,009,962	-		DZA65_RS09560	0.74	+0.3
2,009,965	+		DZA65_RS09560	0.74	+0.3
2,009,965	+		DZA65_RS09560	0.74	-0.2
2,009,966	-		DZA65_RS09560	0.74	+1.5
2,009,980	-		DZA65_RS09560	0.75	-0.1
2,009,980	-		DZA65_RS09560	0.75	-1.9
2,010,020	+		DZA65_RS09560	0.78	-1.3
2,010,021	-		DZA65_RS09560	0.79	-0.8
2,010,055	-		DZA65_RS09560	0.81	+0.5
2,010,105	+		DZA65_RS09560	0.86	-0.5
2,010,105	+		DZA65_RS09560	0.86	-0.8
2,010,156	-				+1.5
2,010,325	+				-0.0
2,010,325	+				+0.1
2,010,325	+				+0.3
2,010,325	+				+0.1
2,010,325	+				-1.5
2,010,326	-				+0.2
2,010,378	+				-0.5
2,010,378	+				-0.2
2,010,394	-				-2.0
2,010,446	-				+0.5
2,010,460	+				+2.5
2,010,460	+				-1.5
2,010,461	-				-0.0
2,010,461	-				+0.5
2,010,465	-				+1.2
2,010,481	+				+0.0
2,010,481	+				-0.2
2,010,481	+				+0.5
2,010,481	+				-1.0
2,010,482	-				+0.1
2,010,482	-				-0.0
2,010,482	-				+0.3
2,010,482	-				+0.8
2,010,482	-				-0.0
2,010,482	-				+0.3
2,010,482	-				+0.5
2,010,482	-				-0.5
2,010,482	-				+0.0
2,010,482	-				-0.5
2,010,485	+				-0.5
2,010,485	+				+0.8
2,010,485	+				-0.5
2,010,485	+				-1.8
2,010,485	+				+1.4
2,010,486	-				+2.5
2,010,486	-				+0.0
2,010,486	-				-0.2
2,010,487	+				+1.1
2,010,609	+				+0.4
2,010,609	+				-0.8
2,010,609	+				-1.0
2,010,610	-				-0.2
2,010,641	+				+0.7
2,010,642	-				-0.9
2,010,642	-				+0.5
2,010,642	-				+0.9
2,010,642	-				+0.0
2,010,724	+		DZA65_RS09565	0.10	-2.0
2,010,724	+		DZA65_RS09565	0.10	-0.8
2,010,725	-		DZA65_RS09565	0.10	-0.5
2,010,725	-		DZA65_RS09565	0.10	-1.0
2,010,725	-		DZA65_RS09565	0.10	+0.1
2,010,762	+		DZA65_RS09565	0.13	+0.5
2,010,762	+		DZA65_RS09565	0.13	-0.3
2,010,762	+		DZA65_RS09565	0.13	+0.3
2,010,762	+		DZA65_RS09565	0.13	+1.0
2,010,763	-		DZA65_RS09565	0.13	-0.4
2,010,763	-		DZA65_RS09565	0.13	-1.2
2,010,763	-		DZA65_RS09565	0.13	-0.0
2,010,766	+		DZA65_RS09565	0.14	+0.3
2,010,766	+		DZA65_RS09565	0.14	+0.3
2,010,766	+		DZA65_RS09565	0.14	-0.2
2,010,767	-		DZA65_RS09565	0.14	-0.0
2,010,786	+		DZA65_RS09565	0.15	+0.2
2,010,786	+		DZA65_RS09565	0.15	+0.8
2,010,786	+		DZA65_RS09565	0.15	+0.5
2,010,787	-		DZA65_RS09565	0.16	-0.5
2,010,808	-		DZA65_RS09565	0.17	-1.6
2,010,889	+		DZA65_RS09565	0.24	-1.3
2,010,889	+		DZA65_RS09565	0.24	-0.3
2,010,889	+		DZA65_RS09565	0.24	-1.2
2,010,889	+		DZA65_RS09565	0.24	+0.0
2,010,890	-		DZA65_RS09565	0.25	-0.8
2,010,896	+		DZA65_RS09565	0.25	+0.6
2,011,023	-		DZA65_RS09565	0.36	-1.9
2,011,023	-		DZA65_RS09565	0.36	+0.2
2,011,063	-		DZA65_RS09565	0.40	-0.8
2,011,224	+		DZA65_RS09565	0.54	-0.3