Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08305

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
1,749,615	+				-0.2
1,749,615	+				-0.4
1,749,616	-				-0.7
1,749,616	-				+1.2
1,749,616	-				-0.4
1,749,616	-				-1.0
1,749,616	-				+0.0
1,749,616	-				-2.6
1,749,707	-				+1.1
1,749,771	+				-0.4
1,749,771	+				-0.7
1,749,772	-				-0.5
1,749,772	-				+0.2
1,749,772	-				+0.3
1,749,834	+				-0.2
1,749,834	+				+0.4
1,749,835	-				-1.6
1,749,835	-				-0.8
1,749,836	+				-0.1
1,749,837	-				-0.1
1,750,070	+		DZA65_RS08300	0.36	-0.8
1,750,074	+		DZA65_RS08300	0.36	+0.4
1,750,074	+		DZA65_RS08300	0.36	+0.7
1,750,074	+		DZA65_RS08300	0.36	+0.0
1,750,074	+		DZA65_RS08300	0.36	+0.0
1,750,075	-		DZA65_RS08300	0.37	+0.1
1,750,075	-		DZA65_RS08300	0.37	+1.2
1,750,075	-		DZA65_RS08300	0.37	+1.1
1,750,075	-		DZA65_RS08300	0.37	+0.8
1,750,086	+		DZA65_RS08300	0.38	-0.7
1,750,087	-		DZA65_RS08300	0.38	-0.4
1,750,087	-		DZA65_RS08300	0.38	-0.1
1,750,087	-		DZA65_RS08300	0.38	+1.6
1,750,087	-		DZA65_RS08300	0.38	-0.1
1,750,087	-		DZA65_RS08300	0.38	-1.0
1,750,139	+		DZA65_RS08300	0.46	-0.7
1,750,139	+		DZA65_RS08300	0.46	-0.7
1,750,139	+		DZA65_RS08300	0.46	-0.2
1,750,140	-		DZA65_RS08300	0.46	-2.0
1,750,140	-		DZA65_RS08300	0.46	+0.9
1,750,209	+		DZA65_RS08300	0.56	-1.0
1,750,227	+		DZA65_RS08300	0.58	+0.4
1,750,227	+		DZA65_RS08300	0.58	+0.0
1,750,227	+		DZA65_RS08300	0.58	-1.4
1,750,227	+		DZA65_RS08300	0.58	-0.4
1,750,227	+		DZA65_RS08300	0.58	+0.1
1,750,228	-		DZA65_RS08300	0.59	+0.6
1,750,228	-		DZA65_RS08300	0.59	-0.8
1,750,228	-		DZA65_RS08300	0.59	+0.6
1,750,228	-		DZA65_RS08300	0.59	+0.8
1,750,230	+		DZA65_RS08300	0.59	-0.1
1,750,230	+		DZA65_RS08300	0.59	-0.7
1,750,230	+		DZA65_RS08300	0.59	-1.7
1,750,231	-		DZA65_RS08300	0.59	-1.0
1,750,231	-		DZA65_RS08300	0.59	+0.8
1,750,231	-		DZA65_RS08300	0.59	-1.4
1,750,231	-		DZA65_RS08300	0.59	-1.7
1,750,231	-		DZA65_RS08300	0.59	-0.7
1,750,231	-		DZA65_RS08300	0.59	-1.4
1,750,231	-		DZA65_RS08300	0.59	-0.6
1,750,231	-		DZA65_RS08300	0.59	+2.7
1,750,278	+		DZA65_RS08300	0.66	+0.2
1,750,278	+		DZA65_RS08300	0.66	-0.4
1,750,278	+		DZA65_RS08300	0.66	+0.5
1,750,278	+		DZA65_RS08300	0.66	-0.7
1,750,279	-		DZA65_RS08300	0.66	+0.9
1,750,279	-		DZA65_RS08300	0.66	-0.1
1,750,279	-		DZA65_RS08300	0.66	+0.6
1,750,413	+		DZA65_RS08300	0.85	+0.2
1,750,413	+		DZA65_RS08300	0.85	+0.9
1,750,413	+		DZA65_RS08300	0.85	-0.4
1,750,413	+		DZA65_RS08300	0.85	-1.0
1,750,414	-		DZA65_RS08300	0.85	-0.2
1,750,414	-		DZA65_RS08300	0.85	+2.2
1,750,414	-		DZA65_RS08300	0.85	-0.8
1,750,414	-		DZA65_RS08300	0.85	-0.1
1,750,452	+				-0.2
1,750,515	+				-0.2
1,750,515	+				+0.0
1,750,516	-				+0.0
1,750,516	-				-0.6
1,750,634	+		DZA65_RS08305	0.14	-0.4
1,750,634	+				-0.7
1,750,635	-		DZA65_RS08305	0.14	-1.7
1,750,871	+		DZA65_RS08305	0.39	+0.9
1,750,872	-		DZA65_RS08305	0.39	-0.5
1,750,879	+		DZA65_RS08305	0.40	-0.2
1,750,879	+		DZA65_RS08305	0.40	-0.4
1,750,880	-		DZA65_RS08305	0.40	+1.6
1,750,880	-		DZA65_RS08305	0.40	+3.4
1,750,880	-		DZA65_RS08305	0.40	+2.9
1,750,880	-		DZA65_RS08305	0.40	-0.4
1,750,880	-		DZA65_RS08305	0.40	+1.0
1,750,880	-		DZA65_RS08305	0.40	+0.1
1,750,973	+		DZA65_RS08305	0.50	+0.1
1,750,974	-		DZA65_RS08305	0.50	-2.6
1,751,013	+		DZA65_RS08305	0.54	+0.0
1,751,013	+		DZA65_RS08305	0.54	+0.0
1,751,020	-		DZA65_RS08305	0.55	+1.1
1,751,020	-		DZA65_RS08305	0.55	+0.5
1,751,094	-		DZA65_RS08305	0.63	-0.1
1,751,412	+				+0.4
1,751,412	+				-1.3
1,751,412	+				+0.1
1,751,412	+				-2.2
1,751,413	-				-0.7
1,751,413	-				-0.8
1,751,422	+				-1.4
1,751,422	+				+0.1
1,751,423	-				-0.4
1,751,423	-				-1.4
1,751,423	-				-1.3
1,751,457	+				-0.6
1,751,457	+				+1.2
1,751,492	+				-0.5
1,751,519	+				-1.8
1,751,520	-				+0.6
1,751,520	-				+0.3
1,751,537	+				+0.2
1,751,537	+				-0.1
1,751,538	-				+0.3
1,751,550	+				+0.2
1,751,550	+				-2.0
1,751,550	+				+0.2
1,751,550	+				+0.6
1,751,550	+				-0.4
1,751,550	+				-0.4
1,751,550	+				-2.2
1,751,550	+				-1.7
1,751,550	+				-1.0
1,751,550	+				-0.1
1,751,550	+				+1.3
1,751,550	+				+0.2
1,751,550	+				-0.5
1,751,550	+				-0.1
1,751,551	-				+0.0
1,751,551	-				+0.1
1,751,551	-				+0.1
1,751,551	-				-0.6
1,751,551	-				-1.0
1,751,551	-				+1.1
1,751,551	-				-0.3
1,751,551	-				+0.1
1,751,551	-				+0.1
1,751,551	-				+1.4
1,751,551	-				+0.3
1,751,551	-				+0.6
1,751,551	-				-0.4
1,751,551	-				-0.4
1,751,551	-				+0.3
1,751,551	-				-0.2
1,751,551	-				-0.4
1,751,551	-				+1.1
1,751,552	+				-0.6
1,751,552	+				-0.7
1,751,552	+				-0.5
1,751,552	+				+1.0
1,751,552	+				-0.8
1,751,552	+				+0.8
1,751,552	+				-0.5
1,751,552	+				-0.4
1,751,552	+				+0.6
1,751,552	+				+0.2
1,751,552	+				-0.8
1,751,552	+				+0.4
1,751,552	+				+0.6
1,751,552	+				+0.3
1,751,552	+				+0.0
1,751,552	+				-1.1
1,751,552	+				-1.3
1,751,552	+				+0.1
1,751,553	-				-1.1
1,751,553	-				+0.6
1,751,553	-				-0.5
1,751,553	-				+0.3
1,751,553	-				+0.0
1,751,553	-				-0.6
1,751,553	-				-2.4
1,751,553	-				-1.4
1,751,553	-				-0.5
1,751,553	-				-1.0
1,751,553	-				+1.9
1,751,553	-				+0.3
1,751,553	-				+0.2
1,751,553	-				-1.4
1,751,553	-				+1.4
1,751,553	-				-0.5
1,751,553	-				+0.4
1,751,553	-				-0.4
1,751,553	-				-2.0
1,751,553	-				-0.4
1,751,553	-				-0.1
1,751,553	-				-0.1
1,751,609	+				+0.2
1,751,610	-				-0.6
1,751,610	-				-0.8
1,751,610	-				+1.0
1,751,610	-				+1.0
1,751,615	+				+0.0
1,751,615	+				-1.8
1,751,616	-				-2.2
1,751,616	-				-0.4
1,751,616	-				+0.0
1,751,616	-				-1.3
1,751,634	-				-0.8
1,751,779	-		DZA65_RS08310	0.22	-0.3
1,752,000	+		DZA65_RS08310	0.50	+0.2
1,752,001	-		DZA65_RS08310	0.51	+0.2
1,752,001	-		DZA65_RS08310	0.51	-0.4
1,752,001	-		DZA65_RS08310	0.51	+0.3
1,752,001	-		DZA65_RS08310	0.51	-1.0
1,752,001	-		DZA65_RS08310	0.51	-0.2
1,752,039	-		DZA65_RS08310	0.55	+0.3
1,752,225	+		DZA65_RS08310	0.79	+1.5
1,752,245	+		DZA65_RS08310	0.82	-1.0
1,752,245	+		DZA65_RS08310	0.82	+0.1
1,752,245	+		DZA65_RS08310	0.82	+0.1
1,752,245	+		DZA65_RS08310	0.82	-0.2
1,752,245	+		DZA65_RS08310	0.82	+0.6
1,752,245	+		DZA65_RS08310	0.82	+0.9
1,752,245	+		DZA65_RS08310	0.82	+0.2
1,752,245	+		DZA65_RS08310	0.82	-2.0
1,752,245	+		DZA65_RS08310	0.82	+2.1
1,752,245	+		DZA65_RS08310	0.82	+1.0
1,752,246	-		DZA65_RS08310	0.82	-0.0
1,752,246	-		DZA65_RS08310	0.82	-0.8
1,752,246	-		DZA65_RS08310	0.82	+0.7
1,752,246	-		DZA65_RS08310	0.82	-1.0
1,752,246	-		DZA65_RS08310	0.82	-2.0
1,752,246	-				+0.6
1,752,246	-		DZA65_RS08310	0.82	-1.8
1,752,246	-		DZA65_RS08310	0.82	-0.7
1,752,246	-		DZA65_RS08310	0.82	-0.8
1,752,246	-		DZA65_RS08310	0.82	+0.3
1,752,246	-		DZA65_RS08310	0.82	+0.0
1,752,246	-		DZA65_RS08310	0.82	+0.6
1,752,246	-		DZA65_RS08310	0.82	+0.3
1,752,246	-		DZA65_RS08310	0.82	-0.4
1,752,246	-		DZA65_RS08310	0.82	+0.6
1,752,248	+		DZA65_RS08310	0.82	-0.1
1,752,248	+		DZA65_RS08310	0.82	-1.2
1,752,248	+		DZA65_RS08310	0.82	-1.0
1,752,249	-		DZA65_RS08310	0.82	-2.0
1,752,249	-				+0.6
1,752,249	-		DZA65_RS08310	0.82	+1.1
1,752,249	-		DZA65_RS08310	0.82	+0.9
1,752,275	+		DZA65_RS08310	0.86	-0.7
1,752,275	+		DZA65_RS08310	0.86	+0.5
1,752,275	+		DZA65_RS08310	0.86	+0.1
1,752,275	+		DZA65_RS08310	0.86	-1.1
1,752,276	-		DZA65_RS08310	0.86	+0.0
1,752,276	-		DZA65_RS08310	0.86	-1.7
1,752,276	-		DZA65_RS08310	0.86	-1.0
1,752,276	-		DZA65_RS08310	0.86	+1.0
1,752,360	+				-0.4
1,752,384	+				-1.2
1,752,385	-				+0.1
1,752,385	-				-0.6
1,752,390	+				-1.2
1,752,390	+				-1.2
1,752,390	+				-0.2
1,752,391	-				+0.6
1,752,391	-				+0.3