Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07550

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
1,573,952	+		DZA65_RS07545	0.63	-0.3
1,573,987	+		DZA65_RS07545	0.65	+0.5
1,574,070	+		DZA65_RS07545	0.68	-0.6
1,574,101	+		DZA65_RS07545	0.69	-0.5
1,574,101	+		DZA65_RS07545	0.69	+1.1
1,574,102	-		DZA65_RS07545	0.69	-0.9
1,574,108	-		DZA65_RS07545	0.69	-0.1
1,574,136	+		DZA65_RS07545	0.70	+0.8
1,574,136	+		DZA65_RS07545	0.70	-0.2
1,574,136	+		DZA65_RS07545	0.70	-0.4
1,574,137	-		DZA65_RS07545	0.70	-1.0
1,574,137	-		DZA65_RS07545	0.70	+0.7
1,574,137	-		DZA65_RS07545	0.70	+1.0
1,574,138	+		DZA65_RS07545	0.70	+0.2
1,574,138	+		DZA65_RS07545	0.70	+0.5
1,574,138	+		DZA65_RS07545	0.70	-0.3
1,574,138	+		DZA65_RS07545	0.70	-0.3
1,574,138	+		DZA65_RS07545	0.70	+0.9
1,574,138	+		DZA65_RS07545	0.70	-0.2
1,574,138	+		DZA65_RS07545	0.70	+0.3
1,574,138	+		DZA65_RS07545	0.70	-1.3
1,574,138	+		DZA65_RS07545	0.70	-1.1
1,574,138	+		DZA65_RS07545	0.70	-1.6
1,574,138	+		DZA65_RS07545	0.70	-0.3
1,574,139	-		DZA65_RS07545	0.70	+0.7
1,574,139	-		DZA65_RS07545	0.70	-1.2
1,574,144	+		DZA65_RS07545	0.71	-1.6
1,574,145	-		DZA65_RS07545	0.71	+0.1
1,574,145	-		DZA65_RS07545	0.71	+0.1
1,574,147	-		DZA65_RS07545	0.71	-0.7
1,574,147	-		DZA65_RS07545	0.71	+1.3
1,574,323	+		DZA65_RS07545	0.78	-0.3
1,574,326	+		DZA65_RS07545	0.78	+0.3
1,574,326	+		DZA65_RS07545	0.78	+0.1
1,574,326	+		DZA65_RS07545	0.78	+1.0
1,574,327	-		DZA65_RS07545	0.78	-1.6
1,574,327	-		DZA65_RS07545	0.78	+1.3
1,574,327	-		DZA65_RS07545	0.78	+0.7
1,574,378	+		DZA65_RS07545	0.80	-0.2
1,574,378	+		DZA65_RS07545	0.80	-1.3
1,574,379	-		DZA65_RS07545	0.80	+0.3
1,574,379	-		DZA65_RS07545	0.80	+0.2
1,574,379	-		DZA65_RS07545	0.80	-0.5
1,574,379	-		DZA65_RS07545	0.80	-1.3
1,574,379	-		DZA65_RS07545	0.80	-1.2
1,574,383	+		DZA65_RS07545	0.80	-0.6
1,574,384	-		DZA65_RS07545	0.80	-0.3
1,574,384	-		DZA65_RS07545	0.80	-0.3
1,574,384	-		DZA65_RS07545	0.80	-0.0
1,574,386	-		DZA65_RS07545	0.80	-0.1
1,574,426	+		DZA65_RS07545	0.82	+0.9
1,574,427	-		DZA65_RS07545	0.82	+2.3
1,574,517	+		DZA65_RS07545	0.85	-2.5
1,574,517	+		DZA65_RS07545	0.85	-1.3
1,574,517	+		DZA65_RS07545	0.85	+0.7
1,574,518	-		DZA65_RS07545	0.85	+0.1
1,574,518	-		DZA65_RS07545	0.85	-0.3
1,574,518	-		DZA65_RS07545	0.85	+0.1
1,574,518	-		DZA65_RS07545	0.85	+0.0
1,574,518	-		DZA65_RS07545	0.85	+0.6
1,574,521	+		DZA65_RS07545	0.85	-0.1
1,574,521	+		DZA65_RS07545	0.85	+0.7
1,574,521	+		DZA65_RS07545	0.85	-1.3
1,574,521	+		DZA65_RS07545	0.85	-0.6
1,574,521	+		DZA65_RS07545	0.85	-0.3
1,574,521	+		DZA65_RS07545	0.85	-0.9
1,574,521	+		DZA65_RS07545	0.85	+1.2
1,574,521	+		DZA65_RS07545	0.85	+0.1
1,574,521	+		DZA65_RS07545	0.85	-1.1
1,574,521	+		DZA65_RS07545	0.85	-0.1
1,574,521	+		DZA65_RS07545	0.85	+0.4
1,574,521	+		DZA65_RS07545	0.85	+0.7
1,574,521	+		DZA65_RS07545	0.85	-1.8
1,574,521	+		DZA65_RS07545	0.85	+1.1
1,574,521	+		DZA65_RS07545	0.85	+0.7
1,574,521	+		DZA65_RS07545	0.85	-0.9
1,574,521	+		DZA65_RS07545	0.85	-0.9
1,574,521	+		DZA65_RS07545	0.85	+1.9
1,574,522	-		DZA65_RS07545	0.85	+1.1
1,574,522	-		DZA65_RS07545	0.85	+1.7
1,574,522	-		DZA65_RS07545	0.85	+1.0
1,574,522	-		DZA65_RS07545	0.85	+0.4
1,574,522	-		DZA65_RS07545	0.85	+1.5
1,574,522	-		DZA65_RS07545	0.85	-0.6
1,574,522	-		DZA65_RS07545	0.85	-0.8
1,574,522	-		DZA65_RS07545	0.85	-0.3
1,574,522	-		DZA65_RS07545	0.85	+0.7
1,574,522	-		DZA65_RS07545	0.85	-1.3
1,574,522	-		DZA65_RS07545	0.85	-0.6
1,574,522	-		DZA65_RS07545	0.85	-0.2
1,574,522	-		DZA65_RS07545	0.85	-0.2
1,574,522	-		DZA65_RS07545	0.85	+1.0
1,574,522	-		DZA65_RS07545	0.85	+0.5
1,574,547	-		DZA65_RS07545	0.86	+0.7
1,574,612	+		DZA65_RS07545	0.89	-0.8
1,574,619	+		DZA65_RS07545	0.89	-0.9
1,574,620	-		DZA65_RS07545	0.89	+0.3
1,574,620	-		DZA65_RS07545	0.89	-0.5
1,574,623	+		DZA65_RS07545	0.89	+1.4
1,574,623	+		DZA65_RS07545	0.89	-0.1
1,574,623	+		DZA65_RS07545	0.89	+0.1
1,574,623	+		DZA65_RS07545	0.89	-0.5
1,574,623	+		DZA65_RS07545	0.89	+0.3
1,574,624	-		DZA65_RS07545	0.89	-0.4
1,574,624	-		DZA65_RS07545	0.89	-0.7
1,574,624	-		DZA65_RS07545	0.89	-1.3
1,574,628	+		DZA65_RS07545	0.89	-0.6
1,574,657	+				-0.3
1,574,704	+				+0.4
1,574,704	+				-1.3
1,574,705	-				+1.4
1,574,705	-				-0.3
1,574,706	+				-0.9
1,574,706	+				+0.1
1,574,706	+				-0.4
1,574,706	+				-0.5
1,574,707	-				+0.4
1,574,707	-				-1.3
1,574,707	-				+0.7
1,574,717	+				+0.4
1,574,717	+				-0.5
1,574,718	-				+1.2
1,574,718	-				+0.7
1,574,718	-				+0.4
1,574,718	-				+0.4
1,574,719	+				-0.1
1,574,720	-				-0.3
1,574,801	-				-0.5
1,574,801	-				-0.3
1,574,838	+				-0.1
1,574,851	+				-0.1
1,574,851	+				+0.3
1,574,851	+				-0.6
1,574,851	+				+0.7
1,574,852	-				-0.1
1,574,852	-				-0.6
1,574,852	-				-0.3
1,574,872	+				-0.1
1,574,899	+				-1.3
1,574,900	-				-0.3
1,574,900	-				-0.7
1,574,900	-				+0.1
1,574,900	-				-0.9
1,574,900	-				-0.1
1,574,915	+				-1.0
1,574,916	-				-2.3
1,574,916	-				+1.3
1,574,953	+				+0.4
1,575,009	+				-1.1
1,575,023	+		DZA65_RS07550	0.10	-0.5
1,575,023	+		DZA65_RS07550	0.10	-1.3
1,575,023	+		DZA65_RS07550	0.10	-1.1
1,575,023	+		DZA65_RS07550	0.10	-1.3
1,575,023	+		DZA65_RS07550	0.10	-0.3
1,575,023	+				+0.7
1,575,039	+		DZA65_RS07550	0.12	-0.5
1,575,039	+		DZA65_RS07550	0.12	-0.5
1,575,039	+		DZA65_RS07550	0.12	-1.1
1,575,061	+		DZA65_RS07550	0.13	+0.3
1,575,062	-		DZA65_RS07550	0.13	-0.3
1,575,126	+		DZA65_RS07550	0.19	+0.0
1,575,236	+		DZA65_RS07550	0.28	-0.4
1,575,247	+		DZA65_RS07550	0.29	+1.1
1,575,309	+		DZA65_RS07550	0.34	+0.1
1,575,309	+		DZA65_RS07550	0.34	-0.7
1,575,309	+		DZA65_RS07550	0.34	+0.1
1,575,309	+		DZA65_RS07550	0.34	-0.4
1,575,346	+		DZA65_RS07550	0.37	-1.4
1,575,408	+		DZA65_RS07550	0.42	+3.8
1,575,408	+		DZA65_RS07550	0.42	-0.6
1,575,408	+		DZA65_RS07550	0.42	-0.1
1,575,515	+		DZA65_RS07550	0.50	-0.9
1,575,517	+		DZA65_RS07550	0.50	+0.5
1,575,533	+		DZA65_RS07550	0.52	+0.2
1,575,533	+		DZA65_RS07550	0.52	-0.5
1,575,533	+		DZA65_RS07550	0.52	-0.8
1,575,637	+		DZA65_RS07550	0.60	+0.7
1,575,637	+		DZA65_RS07550	0.60	-0.3
1,575,712	+		DZA65_RS07550	0.66	-0.9
1,575,748	+		DZA65_RS07550	0.69	+1.8
1,575,751	+		DZA65_RS07550	0.70	-2.1
1,575,751	+		DZA65_RS07550	0.70	+0.7
1,575,769	+		DZA65_RS07550	0.71	+0.2
1,575,874	+		DZA65_RS07550	0.80	-0.5
1,575,874	+		DZA65_RS07550	0.80	-1.6
1,575,874	+		DZA65_RS07550	0.80	-0.6
1,575,959	+		DZA65_RS07550	0.86	+0.2
1,576,065	+				-0.4
1,576,169	+				-1.5
1,576,169	+				-0.2
1,576,169	+				+0.1
1,576,170	-				-1.3
1,576,199	+				-0.5
1,576,247	+				-1.6
1,576,248	-				+0.3
1,576,251	+				-0.5
1,576,252	-				-0.6
1,576,252	-				+0.4
1,576,257	+				-2.8
1,576,257	+				-2.6
1,576,272	+				+0.0
1,576,272	+				-0.9
1,576,273	-				+3.0
1,576,273	-				-0.7
1,576,273	-				+0.4
1,576,277	+				-0.8
1,576,278	-				+1.4
1,576,278	-				+0.2
1,576,278	-				-0.3
1,576,283	+				+0.1
1,576,284	-				-0.4
1,576,284	-				-0.5
1,576,287	-				-1.1
1,576,290	+				+0.3
1,576,291	-				-0.3
1,576,297	+				+0.4
1,576,297	+				-0.0
1,576,298	-				-1.3
1,576,300	+				+0.2
1,576,300	+				+0.4
1,576,412	-				+0.1
1,576,437	+				+0.7
1,576,437	+				-0.8
1,576,464	+				-0.7
1,576,464	+				-0.3
1,576,464	+				+0.5
1,576,465	-				-0.6
1,576,465	-				-0.4
1,576,497	+				+1.0
1,576,498	-				+0.2
1,576,498	-				+0.1
1,576,506	+				-1.6
1,576,506	+				+0.4
1,576,510	+				-0.9
1,576,510	+				+0.6
1,576,510	+				-2.9
1,576,510	+				-0.1
1,576,510	+				-0.1
1,576,511	-				+0.0
1,576,534	+				-0.1
1,576,535	-				-1.1
1,576,535	-				+0.1
1,576,535	-				+0.1
1,576,535	-				-0.9
1,576,535	-				-0.1
1,576,535	-				-1.1
1,576,611	-				+1.4
1,576,630	+				-1.3
1,576,720	+				+1.7
1,576,720	+				+1.2
1,576,720	+				+2.4
1,576,721	-				-1.3
1,576,721	-				+0.5
1,576,786	-				-1.4
1,576,883	-				-1.8
1,576,940	+		DZA65_RS07555	0.12	-0.1
1,576,940	+		DZA65_RS07555	0.12	+0.9
1,576,944	+		DZA65_RS07555	0.13	-0.1
1,576,944	+		DZA65_RS07555	0.13	-0.1
1,576,944	+		DZA65_RS07555	0.13	+1.2
1,576,944	+		DZA65_RS07555	0.13	+0.9
1,576,990	+		DZA65_RS07555	0.18	+0.0
1,577,068	-		DZA65_RS07555	0.26	-0.2
1,577,082	-		DZA65_RS07555	0.27	+1.4