Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07260

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
1,508,069	+		DZA65_RS07255	0.15	-0.3
1,508,110	+		DZA65_RS07255	0.19	+0.2
1,508,110	+		DZA65_RS07255	0.19	+0.1
1,508,162	+		DZA65_RS07255	0.24	+0.4
1,508,276	+		DZA65_RS07255	0.34	+0.7
1,508,276	+		DZA65_RS07255	0.34	-0.1
1,508,277	-		DZA65_RS07255	0.34	-1.5
1,508,488	+		DZA65_RS07255	0.54	-0.9
1,508,489	-		DZA65_RS07255	0.54	-0.3
1,508,595	+		DZA65_RS07255	0.63	-1.7
1,508,595	+		DZA65_RS07255	0.63	-0.1
1,508,595	+		DZA65_RS07255	0.63	-0.5
1,508,595	+		DZA65_RS07255	0.63	+0.6
1,508,595	+		DZA65_RS07255	0.63	-0.7
1,508,595	+		DZA65_RS07255	0.63	-0.0
1,508,595	+		DZA65_RS07255	0.63	-0.5
1,508,595	+		DZA65_RS07255	0.63	-0.5
1,508,595	+		DZA65_RS07255	0.63	+0.7
1,508,596	-		DZA65_RS07255	0.64	-1.1
1,508,596	-		DZA65_RS07255	0.64	-0.3
1,508,596	-		DZA65_RS07255	0.64	-0.6
1,508,596	-		DZA65_RS07255	0.64	+1.0
1,508,596	-		DZA65_RS07255	0.64	-1.0
1,508,596	-		DZA65_RS07255	0.64	+1.2
1,508,606	+		DZA65_RS07255	0.64	-0.9
1,508,606	+		DZA65_RS07255	0.64	+0.9
1,508,658	+		DZA65_RS07255	0.69	+0.1
1,508,659	-		DZA65_RS07255	0.69	+1.2
1,508,681	+		DZA65_RS07255	0.71	-0.0
1,508,827	+				+0.7
1,508,827	+		DZA65_RS07255	0.85	-0.2
1,508,827	+		DZA65_RS07255	0.85	+1.7
1,508,827	+		DZA65_RS07255	0.85	-0.7
1,508,827	+		DZA65_RS07255	0.85	+0.5
1,508,827	+		DZA65_RS07255	0.85	-0.5
1,508,828	-		DZA65_RS07255	0.85	-2.1
1,508,828	-		DZA65_RS07255	0.85	+0.1
1,508,828	-		DZA65_RS07255	0.85	-0.3
1,508,860	+		DZA65_RS07255	0.88	-0.9
1,508,861	-		DZA65_RS07255	0.88	-0.9
1,508,912	+				+0.7
1,508,912	+				+0.0
1,508,912	+				-0.1
1,508,913	-				+0.8
1,508,942	+				-1.6
1,508,942	+				-1.3
1,508,942	+				-0.4
1,508,942	+				-1.6
1,508,942	+				-2.3
1,508,942	+				-0.3
1,508,942	+				-0.3
1,508,942	+				-1.6
1,508,942	+				+0.2
1,508,942	+				+0.7
1,508,942	+				+0.4
1,508,942	+				+1.2
1,508,942	+				+0.5
1,508,942	+				+0.0
1,508,942	+				+0.0
1,508,942	+				+0.4
1,508,942	+				-0.3
1,508,942	+				+0.4
1,508,942	+				+1.3
1,508,942	+				-0.3
1,508,943	-				-0.3
1,508,943	-				-0.7
1,508,943	-				-0.7
1,508,943	-				+1.3
1,508,943	-				-0.3
1,508,943	-				-1.3
1,508,943	-				-0.5
1,508,943	-				-0.3
1,508,943	-				+0.1
1,508,943	-				+0.4
1,508,943	-				+0.1
1,508,943	-				-0.3
1,508,943	-				-1.5
1,508,943	-				+0.7
1,508,943	-				-0.0
1,508,943	-				-2.6
1,508,943	-				+0.6
1,508,943	-				+0.0
1,508,943	-				-1.9
1,508,943	-				+0.4
1,508,944	+				+0.2
1,508,945	-				+1.2
1,508,959	+				-0.0
1,508,960	-				-0.8
1,508,990	-				+0.3
1,508,990	-				+0.4
1,508,991	+				-1.0
1,508,991	+				-0.3
1,509,111	+				+0.2
1,509,111	+				+0.7
1,509,111	+				-0.2
1,509,177	+		DZA65_RS07260	0.13	-0.5
1,509,178	-		DZA65_RS07260	0.13	-0.9
1,509,244	+		DZA65_RS07260	0.17	-0.5
1,509,244	+		DZA65_RS07260	0.17	+1.3
1,509,244	+		DZA65_RS07260	0.17	-0.2
1,509,244	+		DZA65_RS07260	0.17	-1.3
1,509,244	+		DZA65_RS07260	0.17	-0.2
1,509,244	+		DZA65_RS07260	0.17	+0.0
1,509,244	+		DZA65_RS07260	0.17	-1.2
1,509,244	+		DZA65_RS07260	0.17	+0.9
1,509,244	+		DZA65_RS07260	0.17	+0.7
1,509,245	-		DZA65_RS07260	0.17	+0.3
1,509,245	-		DZA65_RS07260	0.17	+0.1
1,509,245	-		DZA65_RS07260	0.17	+0.3
1,509,399	+		DZA65_RS07260	0.28	+0.7
1,509,399	+		DZA65_RS07260	0.28	-0.5
1,509,399	+		DZA65_RS07260	0.28	-1.4
1,509,399	+		DZA65_RS07260	0.28	-0.7
1,509,400	-		DZA65_RS07260	0.28	+0.1
1,509,575	+		DZA65_RS07260	0.39	+0.2
1,509,575	+		DZA65_RS07260	0.39	+0.4
1,509,575	+		DZA65_RS07260	0.39	+0.1
1,509,575	+		DZA65_RS07260	0.39	+2.5
1,509,575	+		DZA65_RS07260	0.39	+0.7
1,509,575	+		DZA65_RS07260	0.39	-1.7
1,509,575	+		DZA65_RS07260	0.39	-0.5
1,509,575	+		DZA65_RS07260	0.39	-0.6
1,509,575	+		DZA65_RS07260	0.39	+0.3
1,509,575	+		DZA65_RS07260	0.39	-0.2
1,509,575	+		DZA65_RS07260	0.39	-0.1
1,509,576	-		DZA65_RS07260	0.39	-0.0
1,509,576	-		DZA65_RS07260	0.39	+0.0
1,509,576	-		DZA65_RS07260	0.39	-1.6
1,509,576	-		DZA65_RS07260	0.39	+0.7
1,509,576	-		DZA65_RS07260	0.39	+0.7
1,509,576	-		DZA65_RS07260	0.39	+1.3
1,509,576	-		DZA65_RS07260	0.39	-0.1
1,509,666	+				-0.3
1,509,667	-				+0.7
1,509,678	-		DZA65_RS07260	0.46	-0.4
1,509,678	-		DZA65_RS07260	0.46	-0.4
1,509,798	+		DZA65_RS07260	0.54	-0.9
1,509,851	-		DZA65_RS07260	0.57	+0.7
1,509,895	+		DZA65_RS07260	0.60	+0.4
1,509,895	+		DZA65_RS07260	0.60	-0.7
1,509,895	+		DZA65_RS07260	0.60	+0.9
1,509,895	+		DZA65_RS07260	0.60	+0.7
1,509,895	+		DZA65_RS07260	0.60	+0.7
1,509,896	-		DZA65_RS07260	0.60	+0.3
1,509,896	-		DZA65_RS07260	0.60	-0.7
1,509,896	-		DZA65_RS07260	0.60	+1.0
1,509,896	-		DZA65_RS07260	0.60	+2.2
1,509,916	+		DZA65_RS07260	0.62	-0.1
1,509,916	+		DZA65_RS07260	0.62	-0.7
1,509,917	-		DZA65_RS07260	0.62	+0.1
1,509,917	-		DZA65_RS07260	0.62	-0.5
1,509,937	+		DZA65_RS07260	0.63	+0.5
1,509,937	+		DZA65_RS07260	0.63	-1.3
1,509,938	-		DZA65_RS07260	0.63	-0.0
1,509,938	-		DZA65_RS07260	0.63	+1.0
1,509,938	-		DZA65_RS07260	0.63	+1.0
1,509,943	+		DZA65_RS07260	0.64	-0.3
1,509,943	+		DZA65_RS07260	0.64	-0.0
1,509,943	+		DZA65_RS07260	0.64	-0.9
1,509,943	+		DZA65_RS07260	0.64	-0.6
1,509,944	-		DZA65_RS07260	0.64	+0.7
1,509,944	-		DZA65_RS07260	0.64	+0.9
1,510,030	+		DZA65_RS07260	0.69	+1.3
1,510,030	+		DZA65_RS07260	0.69	+0.0
1,510,030	+		DZA65_RS07260	0.69	-0.3
1,510,031	-		DZA65_RS07260	0.69	+0.7
1,510,031	-		DZA65_RS07260	0.69	-0.0
1,510,031	-		DZA65_RS07260	0.69	+0.9
1,510,186	+		DZA65_RS07260	0.80	+1.9
1,510,186	+		DZA65_RS07260	0.80	+0.7
1,510,187	-		DZA65_RS07260	0.80	-0.3
1,510,232	+		DZA65_RS07260	0.83	+1.4
1,510,233	-		DZA65_RS07260	0.83	-0.7
1,510,258	+		DZA65_RS07260	0.84	+0.3
1,510,258	+		DZA65_RS07260	0.84	-0.3
1,510,258	+		DZA65_RS07260	0.84	-1.1
1,510,258	+		DZA65_RS07260	0.84	+0.5
1,510,258	+		DZA65_RS07260	0.84	+0.4
1,510,258	+		DZA65_RS07260	0.84	-0.4
1,510,258	+				-0.3
1,510,258	+		DZA65_RS07260	0.84	-1.6
1,510,259	-		DZA65_RS07260	0.84	-1.9
1,510,259	-		DZA65_RS07260	0.84	-1.2
1,510,259	-		DZA65_RS07260	0.84	-0.6
1,510,259	-		DZA65_RS07260	0.84	+2.5
1,510,259	-		DZA65_RS07260	0.84	+0.3
1,510,259	-		DZA65_RS07260	0.84	-0.2
1,510,259	-		DZA65_RS07260	0.84	-0.5
1,510,345	+				+0.6
1,510,345	+				+1.7
1,510,345	+				+2.3
1,510,345	+				-0.3
1,510,345	+				-1.3
1,510,346	-				+0.4
1,510,346	-				-1.3
1,510,346	-				-1.1
1,510,346	-				-2.0
1,510,396	+				+0.3
1,510,397	-				+0.5
1,510,397	-				+1.5
1,510,397	-				-0.2
1,510,399	+				-0.1
1,510,399	+				+1.4
1,510,399	+				+1.1
1,510,400	-				-0.3
1,510,413	+				+1.3
1,510,413	+				-2.2
1,510,413	+				-0.7
1,510,445	-				-2.5
1,510,445	-				+0.7
1,510,445	-				-1.2
1,510,445	-				-1.5
1,510,479	+				-0.4
1,510,479	+				-0.9
1,510,480	-				+0.7
1,510,480	-				-1.3
1,510,480	-				+0.4
1,510,480	-				+0.9
1,510,480	-				+0.2
1,510,529	+				+1.3
1,510,529	+				-0.4
1,510,529	+				+0.5
1,510,530	-				-0.1
1,510,530	-				+1.9
1,510,624	+				-0.3
1,510,624	+				+0.1
1,510,624	+				+0.2
1,510,655	+				+1.2
1,510,656	-				+0.3
1,510,656	-				+0.2
1,510,656	-				-0.9
1,510,665	+				-0.7
1,510,665	+				-1.6
1,510,666	-				+1.0
1,510,684	+		DZA65_RS07265	0.10	-1.3
1,510,685	-		DZA65_RS07265	0.10	-0.6
1,510,685	-		DZA65_RS07265	0.10	+1.2
1,510,717	+		DZA65_RS07265	0.13	-0.0
1,510,717	+		DZA65_RS07265	0.13	+0.8
1,510,718	-		DZA65_RS07265	0.13	+2.5
1,510,718	-		DZA65_RS07265	0.13	-0.3
1,510,718	-		DZA65_RS07265	0.13	-1.3
1,510,935	-		DZA65_RS07265	0.28	-2.1
1,510,975	-		DZA65_RS07265	0.30	-0.7
1,511,018	+		DZA65_RS07265	0.33	+0.3
1,511,018	+		DZA65_RS07265	0.33	+1.9
1,511,019	-		DZA65_RS07265	0.33	-0.7
1,511,036	+		DZA65_RS07265	0.34	-0.5
1,511,036	+		DZA65_RS07265	0.34	-1.3
1,511,036	+		DZA65_RS07265	0.34	-1.6
1,511,036	+		DZA65_RS07265	0.34	-0.3
1,511,160	+		DZA65_RS07265	0.43	-1.4
1,511,201	+		DZA65_RS07265	0.46	-0.0
1,511,202	-		DZA65_RS07265	0.46	-0.9
1,511,364	-		DZA65_RS07265	0.57	-0.1
1,511,372	+		DZA65_RS07265	0.57	+0.7
1,511,372	+		DZA65_RS07265	0.57	-1.3
1,511,372	+		DZA65_RS07265	0.57	+0.7
1,511,372	+		DZA65_RS07265	0.57	+1.7
1,511,372	+		DZA65_RS07265	0.57	-0.3
1,511,373	-		DZA65_RS07265	0.58	-0.9
1,511,373	-		DZA65_RS07265	0.58	-0.0
1,511,373	-		DZA65_RS07265	0.58	+0.7
1,511,373	-		DZA65_RS07265	0.58	+1.6
1,511,373	-		DZA65_RS07265	0.58	+1.7
1,511,373	-		DZA65_RS07265	0.58	-0.9
1,511,373	-		DZA65_RS07265	0.58	+2.1
1,511,373	-		DZA65_RS07265	0.58	+0.4
1,511,373	-		DZA65_RS07265	0.58	+0.4
1,511,373	-		DZA65_RS07265	0.58	-1.6
1,511,424	-		DZA65_RS07265	0.61	+0.8
1,511,459	-		DZA65_RS07265	0.63	+0.7