Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22565

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,879,664	+				-2.6
4,879,665	-				+0.7
4,879,675	+				-1.2
4,879,675	+				+0.1
4,879,675	+				-0.0
4,879,675	+				+0.5
4,879,675	+				+1.9
4,879,675	+				+0.2
4,879,675	+				+0.1
4,879,676	-				-0.8
4,879,676	-				+0.8
4,879,676	-				-0.3
4,879,676	-				+1.1
4,879,676	-				+0.1
4,879,676	-				-0.4
4,879,679	+				+1.7
4,879,679	+				+1.7
4,879,679	+				-0.6
4,879,680	-				+0.2
4,879,680	-				+1.5
4,879,680	-				+2.1
4,879,680	-				-2.3
4,879,737	-				+3.1
4,879,737	-				+0.2
4,879,737	-				-0.3
4,879,750	+				+0.9
4,879,750	+				-0.4
4,879,750	+				-0.8
4,879,750	+				+0.3
4,879,751	-				-0.5
4,879,751	-				+0.2
4,879,751	-				-2.1
4,879,751	-				-1.2
4,879,797	-				-0.5
4,879,798	+				-1.3
4,879,798	+				+1.0
4,879,798	+				-1.9
4,879,799	-				+0.6
4,879,799	-				+0.8
4,879,799	-				+1.1
4,879,799	-				-0.5
4,879,799	-				+0.4
4,879,799	-				+0.7
4,879,799	-				-0.9
4,879,803	+				+0.8
4,879,803	+				-1.1
4,879,803	+				-2.3
4,879,803	+				+0.1
4,879,803	+				-0.9
4,879,803	+				+0.1
4,879,803	+				+0.7
4,879,803	+				+0.1
4,879,803	+				+0.5
4,879,803	+				-0.9
4,879,803	+				-0.2
4,879,803	+				+0.2
4,879,803	+				-0.1
4,879,803	+				+0.4
4,879,803	+				-2.5
4,879,803	+				+0.5
4,879,803	+				-0.7
4,879,804	-				+0.6
4,879,804	-				-0.9
4,879,804	-				-0.9
4,879,804	-				-0.9
4,879,804	-				+1.1
4,879,804	-				-0.5
4,879,804	-				+0.3
4,879,804	-				+1.1
4,879,804	-				-1.2
4,879,804	-				+0.3
4,879,804	-				-0.9
4,879,804	-				+0.2
4,879,804	-				+1.4
4,879,804	-				+0.0
4,879,804	-				+2.7
4,879,804	-				+0.4
4,879,804	-				+2.8
4,879,804	-				+0.7
4,879,804	-				-0.3
4,879,804	-				+1.5
4,879,804	-				-0.6
4,879,804	-				+1.1
4,879,804	-				-1.5
4,879,811	+				-1.7
4,879,811	+				+1.9
4,879,812	-				-0.5
4,879,812	-				+0.1
4,879,812	-				+0.5
4,879,812	-				+0.5
4,879,812	-				+0.1
4,879,812	-				-3.5
4,879,814	+				-1.0
4,879,815	-				-2.0
4,879,815	-				-1.3
4,879,815	-				-0.2
4,879,824	+				-0.0
4,879,824	+				+1.0
4,879,824	+				+0.1
4,879,824	+				-0.9
4,879,825	-				+1.0
4,879,825	-				+0.2
4,879,825	-				+0.5
4,879,825	-				+1.9
4,879,825	-				-2.4
4,879,829	+				-0.9
4,879,829	+				+1.7
4,879,829	+				+0.1
4,879,829	+				-0.0
4,879,830	-				+1.0
4,879,866	+				+0.2
4,879,867	-				-0.3
4,879,928	-				+1.0
4,880,075	+		DZA65_RS22565	0.17	-0.0
4,880,076	-		DZA65_RS22565	0.17	+0.3
4,880,076	-		DZA65_RS22565	0.17	+0.8
4,880,076	-		DZA65_RS22565	0.17	+3.1
4,880,109	-		DZA65_RS22565	0.21	-0.4
4,880,188	+		DZA65_RS22565	0.30	-2.5
4,880,189	-		DZA65_RS22565	0.30	+0.5
4,880,189	-				-1.7
4,880,231	-		DZA65_RS22565	0.35	-0.9
4,880,282	+		DZA65_RS22565	0.42	+2.0
4,880,282	+		DZA65_RS22565	0.42	-0.0
4,880,282	+		DZA65_RS22565	0.42	+0.7
4,880,283	-		DZA65_RS22565	0.42	+1.1
4,880,283	-		DZA65_RS22565	0.42	+2.6
4,880,583	-		DZA65_RS22565	0.78	-0.5
4,880,631	+		DZA65_RS22565	0.83	+0.5
4,880,631	+		DZA65_RS22565	0.83	-1.7
4,880,631	+		DZA65_RS22565	0.83	-2.0
4,880,632	-		DZA65_RS22565	0.83	+1.1
4,880,632	-		DZA65_RS22565	0.83	+1.6
4,880,681	+		DZA65_RS22565	0.89	-1.1
4,880,682	-		DZA65_RS22565	0.89	-2.9
4,880,682	-		DZA65_RS22565	0.89	-0.3
4,880,682	-		DZA65_RS22565	0.89	-1.2
4,880,682	-		DZA65_RS22565	0.89	+1.0
4,880,682	-		DZA65_RS22565	0.89	-0.8
4,880,761	+				+1.1
4,880,762	-				-0.9
4,880,762	-				+0.0
4,880,762	-				+0.1
4,880,762	-				+0.7
4,880,762	-				+1.4
4,880,762	-				+1.5
4,880,762	-				-0.9
4,880,785	+				+1.7
4,880,785	+				-0.9
4,880,786	-				+0.5
4,880,786	-				-0.6
4,880,786	-				+0.4
4,880,799	+				-0.9
4,880,800	-				-0.7
4,880,800	-				+0.4
4,880,811	+				-0.5
4,880,811	+				-2.3
4,880,811	+				-1.7
4,880,811	+				+0.9
4,880,812	-				-0.5
4,880,812	-				+0.5
4,880,887	+				-0.9
4,880,887	+				+0.0
4,880,887	+				+1.0
4,880,887	+				+0.4
4,880,887	+				+0.8
4,880,887	+				-0.3
4,880,887	+				+0.5
4,880,887	+				-0.4
4,880,890	+				-0.1
4,880,890	+				-0.7
4,880,890	+				+1.9
4,880,890	+				+1.0
4,880,890	+				-0.4
4,880,890	+				-0.9
4,880,890	+				+2.8
4,880,890	+				+0.3
4,880,890	+				-0.8
4,880,890	+				-0.1
4,880,896	+				-1.7
4,880,896	+				-0.9
4,880,896	+				-1.3
4,880,951	-				-0.5
4,880,966	+				-0.3
4,880,966	+				+0.5
4,880,966	+				-0.5
4,880,966	+				-1.5
4,880,966	+				-1.9
4,880,966	+				+0.5
4,880,966	+				+1.7
4,880,966	+				-0.1
4,880,966	+				-1.2
4,880,966	+				-1.5
4,880,967	-				-0.7
4,880,967	-				-1.2
4,880,967	-				+1.6
4,880,967	-				+0.8
4,881,017	+				+0.9
4,881,018	-				-0.2
4,881,018	-				-1.2
4,881,018	-				+0.3
4,881,036	-				+1.1
4,881,075	+				-1.2
4,881,075	+				-1.9
4,881,076	-				-1.0
4,881,106	+		DZA65_RS22575	0.12	-2.3
4,881,107	-		DZA65_RS22575	0.12	-1.5
4,881,134	-		DZA65_RS22575	0.16	-1.6
4,881,134	-		DZA65_RS22575	0.16	+0.5
4,881,185	+		DZA65_RS22575	0.22	-0.0
4,881,186	-		DZA65_RS22575	0.22	-1.9
4,881,217	-		DZA65_RS22575	0.27	-1.2
4,881,268	-		DZA65_RS22575	0.33	+0.3
4,881,268	-		DZA65_RS22575	0.33	-0.2
4,881,268	-		DZA65_RS22575	0.33	+2.5
4,881,396	+		DZA65_RS22575	0.51	-0.1
4,881,397	-		DZA65_RS22575	0.51	-1.0
4,881,397	-		DZA65_RS22575	0.51	+0.1
4,881,410	+		DZA65_RS22575	0.52	-0.8
4,881,410	+		DZA65_RS22575	0.52	+1.3
4,881,462	+		DZA65_RS22575	0.59	-1.3
4,881,462	+		DZA65_RS22575	0.59	-0.9
4,881,462	+		DZA65_RS22575	0.59	-0.4
4,881,463	-		DZA65_RS22575	0.60	-0.5
4,881,463	-		DZA65_RS22575	0.60	+0.4
4,881,463	-		DZA65_RS22575	0.60	-0.9
4,881,507	+		DZA65_RS22575	0.65	-1.3
4,881,507	+		DZA65_RS22575	0.65	-1.5
4,881,507	+		DZA65_RS22575	0.65	-0.7
4,881,508	-		DZA65_RS22575	0.66	-2.2
4,881,508	-		DZA65_RS22575	0.66	+1.4
4,881,508	-		DZA65_RS22575	0.66	-1.9
4,881,508	-		DZA65_RS22575	0.66	-1.7
4,881,561	+		DZA65_RS22575	0.73	-1.5
4,881,561	+		DZA65_RS22575	0.73	+0.8
4,881,561	+		DZA65_RS22575	0.73	+0.5
4,881,561	+		DZA65_RS22575	0.73	-2.0
4,881,561	+		DZA65_RS22575	0.73	+1.2
4,881,561	+		DZA65_RS22575	0.73	+0.4
4,881,561	+		DZA65_RS22575	0.73	-0.9
4,881,562	-		DZA65_RS22575	0.73	-0.3
4,881,562	-		DZA65_RS22575	0.73	+0.4
4,881,562	-		DZA65_RS22575	0.73	+0.2
4,881,562	-		DZA65_RS22575	0.73	+3.6
4,881,562	-		DZA65_RS22575	0.73	-1.2
4,881,562	-		DZA65_RS22575	0.73	-0.0
4,881,562	-		DZA65_RS22575	0.73	+1.1
4,881,562	-		DZA65_RS22575	0.73	+0.2
4,881,562	-		DZA65_RS22575	0.73	+1.7
4,881,562	-		DZA65_RS22575	0.73	+1.7
4,881,562	-		DZA65_RS22575	0.73	+0.6
4,881,562	-		DZA65_RS22575	0.73	-1.7
4,881,621	+		DZA65_RS22575	0.81	+0.5
4,881,622	-		DZA65_RS22575	0.81	-0.9
4,881,622	-		DZA65_RS22575	0.81	+1.3
4,881,622	-		DZA65_RS22575	0.81	+0.3
4,881,622	-		DZA65_RS22575	0.81	+0.4
4,881,622	-		DZA65_RS22575	0.81	-0.6
4,881,622	-		DZA65_RS22575	0.81	+1.3
4,881,622	-		DZA65_RS22575	0.81	-0.3
4,881,685	+		DZA65_RS22575	0.89	+1.0
4,881,685	+		DZA65_RS22575	0.89	-0.8
4,881,685	+		DZA65_RS22575	0.89	+4.8
4,881,685	+		DZA65_RS22575	0.89	+0.6
4,881,686	-		DZA65_RS22575	0.89	-0.2
4,881,686	-		DZA65_RS22575	0.89	-2.6
4,881,686	-		DZA65_RS22575	0.89	-0.0
4,881,686	-		DZA65_RS22575	0.89	-2.0
4,881,690	+				+1.0
4,881,690	+				+1.6
4,881,690	+				-2.8
4,881,690	+				-0.5
4,881,690	+				+0.7
4,881,690	+				+1.5
4,881,690	+				+1.1
4,881,690	+				+0.1
4,881,690	+				-0.8
4,881,690	+				-2.8
4,881,690	+				-0.9
4,881,690	+				+0.6
4,881,690	+				+0.3
4,881,690	+				-1.2
4,881,690	+				+0.8
4,881,690	+				-1.7
4,881,690	+				-0.7
4,881,690	+				-1.0
4,881,690	+				-0.4
4,881,690	+				-1.7
4,881,690	+				+1.2
4,881,690	+				+0.1
4,881,690	+				-0.6
4,881,690	+				-0.3
4,881,690	+				-1.5
4,881,690	+				-1.7
4,881,691	-				+1.8
4,881,691	-				+0.9
4,881,691	-				+0.1
4,881,691	-				-1.3
4,881,691	-				+0.8
4,881,691	-				-0.1
4,881,691	-				+0.5
4,881,691	-				+0.5
4,881,691	-				+0.1
4,881,691	-				-0.0
4,881,691	-				-1.2
4,881,691	-				+0.1
4,881,691	-				-0.6
4,881,691	-				-1.2
4,881,691	-				+0.4
4,881,691	-				-2.9
4,881,691	-				-2.9
4,881,691	-				+1.4
4,881,692	+				-0.9
4,881,692	+				+0.5
4,881,692	+				+0.5
4,881,692	+				+0.0
4,881,692	+				-0.9
4,881,693	-				+0.4
4,881,693	-				+1.9