Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22075

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,770,830	+		DZA65_RS22070	0.18	-2.1
4,770,931	+		DZA65_RS22070	0.28	-1.5
4,770,932	-		DZA65_RS22070	0.28	+1.7
4,770,932	-		DZA65_RS22070	0.28	-0.6
4,771,072	+		DZA65_RS22070	0.42	-0.0
4,771,073	-		DZA65_RS22070	0.42	+0.3
4,771,227	+		DZA65_RS22070	0.57	-1.5
4,771,227	+		DZA65_RS22070	0.57	-0.9
4,771,228	-		DZA65_RS22070	0.58	+1.3
4,771,236	+		DZA65_RS22070	0.58	+0.9
4,771,237	-		DZA65_RS22070	0.58	+0.1
4,771,300	+		DZA65_RS22070	0.65	+0.1
4,771,300	+		DZA65_RS22070	0.65	-1.2
4,771,300	+		DZA65_RS22070	0.65	-0.9
4,771,300	+		DZA65_RS22070	0.65	-1.9
4,771,300	+		DZA65_RS22070	0.65	-0.6
4,771,300	+		DZA65_RS22070	0.65	+0.0
4,771,301	-		DZA65_RS22070	0.65	-0.2
4,771,301	-		DZA65_RS22070	0.65	+4.4
4,771,301	-		DZA65_RS22070	0.65	-1.2
4,771,301	-		DZA65_RS22070	0.65	+0.5
4,771,301	-		DZA65_RS22070	0.65	+0.7
4,771,301	-		DZA65_RS22070	0.65	-1.2
4,771,301	-		DZA65_RS22070	0.65	-1.6
4,771,301	-		DZA65_RS22070	0.65	+0.9
4,771,301	-		DZA65_RS22070	0.65	+0.1
4,771,301	-		DZA65_RS22070	0.65	+1.0
4,771,430	+		DZA65_RS22070	0.78	-0.3
4,771,431	-		DZA65_RS22070	0.78	-0.4
4,771,431	-		DZA65_RS22070	0.78	-0.9
4,771,431	-		DZA65_RS22070	0.78	-0.2
4,771,587	+				-0.3
4,771,587	+				+1.0
4,771,587	+				+1.5
4,771,587	+				-0.3
4,771,588	-				-0.5
4,771,588	-				-0.2
4,771,588	-				+0.6
4,771,588	-				+0.6
4,771,588	-				-0.1
4,771,588	-				+0.8
4,771,588	-				-0.6
4,771,591	+				+0.3
4,771,591	+				+1.9
4,771,591	+				+2.3
4,771,591	+				-0.3
4,771,591	+				+0.9
4,771,591	+				-1.2
4,771,591	+				-0.9
4,771,591	+				-0.1
4,771,592	-				+1.9
4,771,592	-				+1.0
4,771,592	-				-1.2
4,771,592	-				-1.7
4,771,592	-				+1.9
4,771,592	-				+0.4
4,771,592	-				-1.5
4,771,638	+				+0.4
4,771,638	+				-0.1
4,771,638	+				-0.5
4,771,638	+				-1.5
4,771,638	+				+0.9
4,771,639	-				+0.6
4,771,639	-				+1.3
4,771,639	-				+1.0
4,771,639	-				+1.1
4,771,639	-				+0.1
4,771,696	-				+1.9
4,771,696	-				-1.5
4,771,696	-				+1.1
4,771,703	+				+0.3
4,771,704	-				-0.9
4,771,801	+				-0.1
4,771,874	+				+2.4
4,771,876	+				-0.3
4,771,876	+				-1.2
4,771,876	+				-0.0
4,771,876	+				-2.3
4,771,876	+				-0.9
4,771,876	+				-1.1
4,771,876	+				-0.9
4,771,876	+				-1.2
4,771,876	+				+0.3
4,771,877	-				+0.5
4,771,877	-				+1.0
4,771,877	-				+1.3
4,771,877	-				-1.0
4,771,877	-				+0.5
4,771,877	-				-0.5
4,771,877	-				+1.4
4,771,877	-				-2.3
4,771,922	+				-2.6
4,772,032	+		DZA65_RS22075	0.16	+0.3
4,772,032	+		DZA65_RS22075	0.16	+1.2
4,772,032	+		DZA65_RS22075	0.16	+1.0
4,772,032	+		DZA65_RS22075	0.16	+0.3
4,772,033	-		DZA65_RS22075	0.16	-2.3
4,772,033	-		DZA65_RS22075	0.16	+1.1
4,772,033	-		DZA65_RS22075	0.16	+1.0
4,772,150	+		DZA65_RS22075	0.24	+1.3
4,772,151	-		DZA65_RS22075	0.25	-1.2
4,772,152	+		DZA65_RS22075	0.25	-1.7
4,772,152	+		DZA65_RS22075	0.25	-0.1
4,772,152	+		DZA65_RS22075	0.25	+1.5
4,772,152	+		DZA65_RS22075	0.25	+1.0
4,772,152	+		DZA65_RS22075	0.25	+0.3
4,772,152	+		DZA65_RS22075	0.25	-1.1
4,772,152	+		DZA65_RS22075	0.25	-0.6
4,772,152	+		DZA65_RS22075	0.25	+0.2
4,772,152	+		DZA65_RS22075	0.25	+1.1
4,772,152	+		DZA65_RS22075	0.25	+0.5
4,772,152	+		DZA65_RS22075	0.25	+0.1
4,772,152	+		DZA65_RS22075	0.25	-0.1
4,772,152	+		DZA65_RS22075	0.25	+2.0
4,772,153	-		DZA65_RS22075	0.25	+0.7
4,772,153	-		DZA65_RS22075	0.25	+0.5
4,772,153	-		DZA65_RS22075	0.25	-1.0
4,772,153	-		DZA65_RS22075	0.25	-3.3
4,772,153	-		DZA65_RS22075	0.25	+0.3
4,772,153	-		DZA65_RS22075	0.25	-0.3
4,772,153	-		DZA65_RS22075	0.25	+0.4
4,772,153	-		DZA65_RS22075	0.25	-0.1
4,772,153	-		DZA65_RS22075	0.25	+1.5
4,772,233	+		DZA65_RS22075	0.30	-0.1
4,772,233	+		DZA65_RS22075	0.30	+0.3
4,772,233	+		DZA65_RS22075	0.30	-0.2
4,772,234	-		DZA65_RS22075	0.30	-0.8
4,772,260	+		DZA65_RS22075	0.32	-2.3
4,772,260	+		DZA65_RS22075	0.32	+1.9
4,772,261	-		DZA65_RS22075	0.32	+0.3
4,772,261	-		DZA65_RS22075	0.32	-0.5
4,772,261	-		DZA65_RS22075	0.32	+0.3
4,772,333	+		DZA65_RS22075	0.37	-0.4
4,772,333	+		DZA65_RS22075	0.37	-0.9
4,772,333	+		DZA65_RS22075	0.37	-1.9
4,772,333	+		DZA65_RS22075	0.37	-1.2
4,772,333	+		DZA65_RS22075	0.37	-1.5
4,772,333	+		DZA65_RS22075	0.37	-1.0
4,772,333	+		DZA65_RS22075	0.37	-0.5
4,772,333	+		DZA65_RS22075	0.37	-0.3
4,772,333	+		DZA65_RS22075	0.37	-0.5
4,772,333	+		DZA65_RS22075	0.37	-1.0
4,772,334	-		DZA65_RS22075	0.37	+0.5
4,772,334	-		DZA65_RS22075	0.37	-0.7
4,772,334	-		DZA65_RS22075	0.37	-1.7
4,772,334	-		DZA65_RS22075	0.37	+1.7
4,772,334	-		DZA65_RS22075	0.37	+1.1
4,772,334	-		DZA65_RS22075	0.37	-1.5
4,772,334	-		DZA65_RS22075	0.37	-0.2
4,772,437	+		DZA65_RS22075	0.45	+0.5
4,772,438	-		DZA65_RS22075	0.45	+0.4
4,772,438	-		DZA65_RS22075	0.45	-0.5
4,772,438	-		DZA65_RS22075	0.45	-0.0
4,772,438	-		DZA65_RS22075	0.45	+1.3
4,772,669	+		DZA65_RS22075	0.61	-2.3
4,772,669	+		DZA65_RS22075	0.61	+0.2
4,772,669	+		DZA65_RS22075	0.61	+0.8
4,772,669	+		DZA65_RS22075	0.61	-1.3
4,772,669	+		DZA65_RS22075	0.61	+1.3
4,772,669	+		DZA65_RS22075	0.61	+1.1
4,772,669	+		DZA65_RS22075	0.61	-0.1
4,772,669	+		DZA65_RS22075	0.61	+1.0
4,772,669	+		DZA65_RS22075	0.61	+0.3
4,772,669	+		DZA65_RS22075	0.61	-0.9
4,772,669	+		DZA65_RS22075	0.61	+1.6
4,772,669	+		DZA65_RS22075	0.61	+1.1
4,772,670	-		DZA65_RS22075	0.61	+0.2
4,772,670	-		DZA65_RS22075	0.61	+2.7
4,772,670	-		DZA65_RS22075	0.61	+1.8
4,772,670	-		DZA65_RS22075	0.61	+0.3
4,772,783	-		DZA65_RS22075	0.69	+0.3
4,772,815	+		DZA65_RS22075	0.71	-0.2
4,772,859	+		DZA65_RS22075	0.74	-0.6
4,772,859	+		DZA65_RS22075	0.74	+0.4
4,772,859	+		DZA65_RS22075	0.74	+1.1
4,772,859	+		DZA65_RS22075	0.74	+0.0
4,772,859	+		DZA65_RS22075	0.74	-1.2
4,772,860	-		DZA65_RS22075	0.74	+0.3
4,772,860	-		DZA65_RS22075	0.74	-1.7
4,772,860	-		DZA65_RS22075	0.74	-0.1
4,772,860	-		DZA65_RS22075	0.74	-2.2
4,772,860	-		DZA65_RS22075	0.74	+1.8
4,773,091	+				+1.1
4,773,092	-				-1.0
4,773,103	+				+1.3
4,773,103	+				+1.1
4,773,103	+				-1.4
4,773,104	-				-2.0
4,773,104	-				-1.9
4,773,110	-				-2.1
4,773,110	-				+1.7
4,773,110	-				+0.5
4,773,110	-				+0.7
4,773,110	-				+0.4
4,773,167	+				-0.1
4,773,224	+				+0.7
4,773,225	-				-0.9
4,773,225	-				+0.1
4,773,231	+				-1.4
4,773,231	+				+0.6
4,773,231	+				+2.1
4,773,232	-				+3.8
4,773,232	-				+0.5
4,773,232	-				+1.1
4,773,232	-				-1.9
4,773,232	-				-1.3
4,773,232	-				+0.1
4,773,232	-				+0.9
4,773,232	-				+1.3
4,773,242	+				-1.6
4,773,295	+				-0.3
4,773,296	-				-0.1
4,773,381	+		DZA65_RS22080	0.11	-0.1
4,773,382	-		DZA65_RS22080	0.11	+0.1
4,773,391	-		DZA65_RS22080	0.12	+1.5
4,773,391	-		DZA65_RS22080	0.12	-0.9
4,773,446	+		DZA65_RS22080	0.16	-1.8
4,773,446	+		DZA65_RS22080	0.16	-1.2
4,773,446	+		DZA65_RS22080	0.16	+1.3
4,773,446	+		DZA65_RS22080	0.16	-0.6
4,773,447	-		DZA65_RS22080	0.16	-1.2
4,773,447	-		DZA65_RS22080	0.16	-0.0
4,773,447	-		DZA65_RS22080	0.16	-2.4
4,773,447	-		DZA65_RS22080	0.16	-0.5
4,773,447	-		DZA65_RS22080	0.16	-1.2
4,773,447	-		DZA65_RS22080	0.16	+0.8
4,773,447	-		DZA65_RS22080	0.16	+0.3
4,773,447	-		DZA65_RS22080	0.16	-1.8
4,773,447	-		DZA65_RS22080	0.16	+0.1
4,773,447	-		DZA65_RS22080	0.16	+0.8
4,773,455	+		DZA65_RS22080	0.17	+0.3
4,773,456	-		DZA65_RS22080	0.17	-1.9
4,773,472	+		DZA65_RS22080	0.18	-0.5
4,773,472	+		DZA65_RS22080	0.18	-1.1
4,773,473	-		DZA65_RS22080	0.18	-0.4
4,773,473	-		DZA65_RS22080	0.18	-0.7
4,773,492	+		DZA65_RS22080	0.20	+2.4
4,773,492	+		DZA65_RS22080	0.20	+2.4
4,773,492	+				-0.5
4,773,492	+		DZA65_RS22080	0.20	+1.3
4,773,492	+		DZA65_RS22080	0.20	+0.7
4,773,493	-		DZA65_RS22080	0.20	+0.4
4,773,493	-		DZA65_RS22080	0.20	+0.1
4,773,493	-		DZA65_RS22080	0.20	-0.2
4,773,494	+		DZA65_RS22080	0.20	+0.1
4,773,494	+		DZA65_RS22080	0.20	+0.5
4,773,495	-		DZA65_RS22080	0.20	+0.1
4,773,495	-		DZA65_RS22080	0.20	-0.9
4,773,495	-		DZA65_RS22080	0.20	-2.8
4,773,495	-		DZA65_RS22080	0.20	+2.3
4,773,495	-		DZA65_RS22080	0.20	-0.5
4,773,495	-		DZA65_RS22080	0.20	-0.9
4,773,495	-		DZA65_RS22080	0.20	+2.7
4,773,540	-		DZA65_RS22080	0.23	-1.7
4,773,540	-		DZA65_RS22080	0.23	+0.8
4,773,549	+		DZA65_RS22080	0.24	-3.2
4,773,636	+		DZA65_RS22080	0.31	+0.3
4,773,637	-		DZA65_RS22080	0.31	-0.2
4,773,713	+		DZA65_RS22080	0.37	-1.2
4,773,713	+		DZA65_RS22080	0.37	+0.7
4,773,713	+		DZA65_RS22080	0.37	+1.1
4,773,714	-		DZA65_RS22080	0.37	-1.0
4,773,753	+		DZA65_RS22080	0.40	-1.5
4,773,753	+				+2.7
4,773,753	+		DZA65_RS22080	0.40	+1.0
4,773,754	-		DZA65_RS22080	0.40	+1.2
4,773,754	-		DZA65_RS22080	0.40	+0.7
4,773,754	-		DZA65_RS22080	0.40	+0.2
4,773,754	-		DZA65_RS22080	0.40	+1.8
4,773,754	-		DZA65_RS22080	0.40	-1.5
4,773,754	-		DZA65_RS22080	0.40	-0.6
4,773,754	-		DZA65_RS22080	0.40	-0.5
4,773,754	-		DZA65_RS22080	0.40	-0.3
4,773,754	-		DZA65_RS22080	0.40	+0.1
4,773,755	+		DZA65_RS22080	0.40	+0.9
4,773,755	+		DZA65_RS22080	0.40	+0.9
4,773,755	+		DZA65_RS22080	0.40	+1.5
4,773,755	+		DZA65_RS22080	0.40	+0.5
4,773,756	-		DZA65_RS22080	0.40	+0.0
4,773,756	-		DZA65_RS22080	0.40	+1.8
4,773,756	-		DZA65_RS22080	0.40	-1.5
4,773,762	-		DZA65_RS22080	0.41	-0.9
4,773,762	-		DZA65_RS22080	0.41	+0.9
4,773,785	+		DZA65_RS22080	0.42	+0.8
4,773,785	+		DZA65_RS22080	0.42	+0.8
4,773,785	+		DZA65_RS22080	0.42	-0.2
4,773,785	+		DZA65_RS22080	0.42	+1.1
4,773,785	+		DZA65_RS22080	0.42	+1.1
4,773,785	+		DZA65_RS22080	0.42	+0.7
4,773,786	-		DZA65_RS22080	0.43	-0.1
4,773,786	-		DZA65_RS22080	0.43	+1.0
4,773,786	-		DZA65_RS22080	0.43	+0.9
4,773,789	+		DZA65_RS22080	0.43	-0.3
4,773,789	+		DZA65_RS22080	0.43	+0.5
4,773,789	+		DZA65_RS22080	0.43	+0.4
4,773,789	+		DZA65_RS22080	0.43	+1.7
4,773,789	+		DZA65_RS22080	0.43	+0.8
4,773,789	+		DZA65_RS22080	0.43	-0.3
4,773,789	+		DZA65_RS22080	0.43	+1.1
4,773,789	+		DZA65_RS22080	0.43	-2.2
4,773,790	-		DZA65_RS22080	0.43	+1.1
4,773,790	-		DZA65_RS22080	0.43	-0.0
4,773,790	-		DZA65_RS22080	0.43	+0.6
4,773,790	-		DZA65_RS22080	0.43	+2.5
4,773,790	-		DZA65_RS22080	0.43	+2.6
4,773,790	-		DZA65_RS22080	0.43	+0.4
4,773,790	-		DZA65_RS22080	0.43	-0.7
4,773,790	-		DZA65_RS22080	0.43	-0.2
4,773,790	-		DZA65_RS22080	0.43	-2.2
4,773,790	-		DZA65_RS22080	0.43	-2.0
4,773,790	-		DZA65_RS22080	0.43	+0.6
4,773,790	-		DZA65_RS22080	0.43	+1.9
4,773,790	-		DZA65_RS22080	0.43	+0.5
4,773,959	+		DZA65_RS22080	0.56	-0.5
4,773,959	+		DZA65_RS22080	0.56	-1.5
4,773,959	+		DZA65_RS22080	0.56	+0.8
4,773,960	-		DZA65_RS22080	0.56	+0.7
4,773,960	-		DZA65_RS22080	0.56	-2.2
4,774,076	+		DZA65_RS22080	0.65	-0.9
4,774,076	+		DZA65_RS22080	0.65	+1.5
4,774,076	+		DZA65_RS22080	0.65	-2.6
4,774,077	-		DZA65_RS22080	0.65	+0.1
4,774,077	-		DZA65_RS22080	0.65	-0.0
4,774,079	+		DZA65_RS22080	0.65	+0.3
4,774,079	+		DZA65_RS22080	0.65	+0.7
4,774,079	+		DZA65_RS22080	0.65	-0.2
4,774,079	+		DZA65_RS22080	0.65	-1.6
4,774,079	+		DZA65_RS22080	0.65	-0.0
4,774,080	-		DZA65_RS22080	0.65	+0.2
4,774,080	-		DZA65_RS22080	0.65	-1.7
4,774,080	-		DZA65_RS22080	0.65	-1.5
4,774,080	-		DZA65_RS22080	0.65	+0.9
4,774,080	-		DZA65_RS22080	0.65	+1.1
4,774,080	-		DZA65_RS22080	0.65	+2.1
4,774,080	-		DZA65_RS22080	0.65	+0.5
4,774,080	-		DZA65_RS22080	0.65	-0.3
4,774,115	+		DZA65_RS22080	0.68	-0.6
4,774,185	+		DZA65_RS22080	0.74	+1.1
4,774,193	+		DZA65_RS22080	0.74	+0.4
4,774,193	+		DZA65_RS22080	0.74	+0.6
4,774,193	+		DZA65_RS22080	0.74	+0.0
4,774,193	+		DZA65_RS22080	0.74	+0.3
4,774,193	+		DZA65_RS22080	0.74	+0.4
4,774,193	+		DZA65_RS22080	0.74	+1.3
4,774,193	+		DZA65_RS22080	0.74	+0.2
4,774,193	+		DZA65_RS22080	0.74	+2.3
4,774,193	+		DZA65_RS22080	0.74	-1.9
4,774,193	+		DZA65_RS22080	0.74	+1.0
4,774,194	-		DZA65_RS22080	0.74	+0.7
4,774,194	-		DZA65_RS22080	0.74	+0.4
4,774,194	-		DZA65_RS22080	0.74	-1.8
4,774,194	-		DZA65_RS22080	0.74	-2.1
4,774,194	-		DZA65_RS22080	0.74	+1.4
4,774,194	-		DZA65_RS22080	0.74	+0.1
4,774,194	-		DZA65_RS22080	0.74	+0.7
4,774,194	-		DZA65_RS22080	0.74	-0.9