Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21150

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,571,870	+				-2.5
4,571,870	+				-0.9
4,571,870	+				-0.5
4,571,870	+				+0.2
4,571,870	+				+2.1
4,571,870	+				-0.9
4,571,870	+				-1.9
4,571,870	+				+0.1
4,571,870	+				+0.4
4,571,870	+				+0.2
4,571,870	+				+2.9
4,571,870	+				-1.4
4,571,871	-				+1.5
4,571,871	-				+0.8
4,571,871	-				+1.3
4,571,871	-				+0.6
4,571,871	-				+1.2
4,571,871	-				-2.1
4,571,937	+				+1.1
4,571,937	+				-1.6
4,571,937	+				-0.5
4,571,937	+				-1.1
4,571,937	+				+0.3
4,571,937	+				-0.2
4,571,937	+				+0.8
4,571,937	+				+1.0
4,571,937	+				-0.9
4,571,937	+				-0.6
4,571,938	-				-0.3
4,571,938	-				-2.0
4,571,938	-				+1.1
4,571,938	-				-1.9
4,571,938	-				+0.4
4,571,938	-				+0.6
4,571,938	-				-0.9
4,571,938	-				+2.1
4,571,938	-				+2.1
4,571,938	-				-3.1
4,571,938	-				-2.7
4,571,938	-				-0.2
4,571,938	-				-0.5
4,571,938	-				-0.1
4,571,938	-				+1.8
4,571,938	-				-0.0
4,571,943	-				+0.1
4,571,943	-				+2.3
4,571,943	-				+1.0
4,571,981	-				+0.8
4,571,981	-				+1.3
4,572,136	+		DZA65_RS21145	0.25	-2.3
4,572,136	+		DZA65_RS21145	0.25	+0.4
4,572,136	+		DZA65_RS21145	0.25	-0.9
4,572,136	+		DZA65_RS21145	0.25	+0.1
4,572,136	+		DZA65_RS21145	0.25	-0.5
4,572,136	+		DZA65_RS21145	0.25	-1.7
4,572,137	-		DZA65_RS21145	0.25	-1.4
4,572,137	-		DZA65_RS21145	0.25	-0.1
4,572,137	-		DZA65_RS21145	0.25	+0.2
4,572,137	-		DZA65_RS21145	0.25	+0.3
4,572,137	-		DZA65_RS21145	0.25	-0.7
4,572,389	+		DZA65_RS21145	0.58	-0.5
4,572,390	-		DZA65_RS21145	0.58	+1.1
4,572,390	-		DZA65_RS21145	0.58	+0.6
4,572,390	-		DZA65_RS21145	0.58	-0.9
4,572,444	+		DZA65_RS21145	0.65	+1.3
4,572,445	-		DZA65_RS21145	0.65	-1.3
4,572,445	-		DZA65_RS21145	0.65	-1.7
4,572,445	-		DZA65_RS21145	0.65	+1.1
4,572,445	-		DZA65_RS21145	0.65	+2.7
4,572,483	+		DZA65_RS21145	0.70	-0.2
4,572,483	+		DZA65_RS21145	0.70	+2.3
4,572,483	+		DZA65_RS21145	0.70	-1.2
4,572,483	+		DZA65_RS21145	0.70	+0.3
4,572,483	+		DZA65_RS21145	0.70	-0.1
4,572,483	+		DZA65_RS21145	0.70	+0.6
4,572,484	-		DZA65_RS21145	0.70	+0.1
4,572,502	-		DZA65_RS21145	0.73	+1.1
4,572,535	+		DZA65_RS21145	0.77	+1.2
4,572,536	-		DZA65_RS21145	0.77	-0.2
4,572,536	-		DZA65_RS21145	0.77	-1.2
4,572,686	-				+1.1
4,572,686	-				+1.2
4,572,698	+				+1.5
4,572,704	-				+2.1
4,572,774	+				-1.2
4,572,774	+				-0.0
4,572,774	+				-0.7
4,572,775	-				+1.8
4,572,775	-				+0.5
4,572,795	+		DZA65_RS21150	0.11	+0.3
4,572,795	+		DZA65_RS21150	0.11	-0.9
4,572,795	+		DZA65_RS21150	0.11	-1.7
4,572,795	+		DZA65_RS21150	0.11	-1.2
4,572,922	+		DZA65_RS21150	0.30	+0.7
4,572,922	+		DZA65_RS21150	0.30	+0.7
4,572,923	-		DZA65_RS21150	0.30	+1.9
4,572,976	+		DZA65_RS21150	0.38	+0.1
4,572,976	+		DZA65_RS21150	0.38	+1.3
4,572,977	-		DZA65_RS21150	0.38	+0.1
4,572,977	-		DZA65_RS21150	0.38	-1.1
4,572,984	+		DZA65_RS21150	0.39	+1.5
4,572,985	-		DZA65_RS21150	0.40	+0.8
4,573,075	+		DZA65_RS21150	0.53	+0.6
4,573,075	+		DZA65_RS21150	0.53	-0.9
4,573,075	+		DZA65_RS21150	0.53	-2.2
4,573,075	+		DZA65_RS21150	0.53	-2.2
4,573,076	-		DZA65_RS21150	0.53	+0.2
4,573,076	-		DZA65_RS21150	0.53	-0.9
4,573,076	-		DZA65_RS21150	0.53	+0.8
4,573,076	-		DZA65_RS21150	0.53	-0.5
4,573,076	-		DZA65_RS21150	0.53	+1.7
4,573,076	-		DZA65_RS21150	0.53	+1.3
4,573,077	+		DZA65_RS21150	0.53	+1.5
4,573,077	+		DZA65_RS21150	0.53	+1.6
4,573,077	+		DZA65_RS21150	0.53	-0.6
4,573,077	+		DZA65_RS21150	0.53	-1.4
4,573,077	+		DZA65_RS21150	0.53	+1.7
4,573,077	+		DZA65_RS21150	0.53	+0.8
4,573,077	+		DZA65_RS21150	0.53	-0.3
4,573,077	+				+2.1
4,573,077	+		DZA65_RS21150	0.53	+1.3
4,573,077	+		DZA65_RS21150	0.53	-0.1
4,573,077	+		DZA65_RS21150	0.53	-1.5
4,573,077	+		DZA65_RS21150	0.53	-1.9
4,573,077	+		DZA65_RS21150	0.53	+0.1
4,573,078	-		DZA65_RS21150	0.53	-1.4
4,573,078	-		DZA65_RS21150	0.53	-0.2
4,573,078	-		DZA65_RS21150	0.53	-1.1
4,573,078	-		DZA65_RS21150	0.53	-1.1
4,573,078	-		DZA65_RS21150	0.53	+0.9
4,573,078	-		DZA65_RS21150	0.53	+0.5
4,573,078	-		DZA65_RS21150	0.53	+1.3
4,573,078	-		DZA65_RS21150	0.53	-0.5
4,573,078	-		DZA65_RS21150	0.53	-0.6
4,573,078	-		DZA65_RS21150	0.53	+0.6
4,573,078	-		DZA65_RS21150	0.53	-0.9
4,573,078	-		DZA65_RS21150	0.53	+1.6
4,573,078	-		DZA65_RS21150	0.53	+1.7
4,573,078	-		DZA65_RS21150	0.53	-0.1
4,573,078	-		DZA65_RS21150	0.53	-0.8
4,573,078	-		DZA65_RS21150	0.53	-0.2
4,573,078	-		DZA65_RS21150	0.53	+0.8
4,573,078	-		DZA65_RS21150	0.53	-0.5
4,573,167	+		DZA65_RS21150	0.67	+1.2
4,573,167	+		DZA65_RS21150	0.67	-0.5
4,573,167	+		DZA65_RS21150	0.67	-1.2
4,573,168	-		DZA65_RS21150	0.67	-0.9
4,573,168	-		DZA65_RS21150	0.67	-1.9
4,573,168	-		DZA65_RS21150	0.67	+1.8
4,573,168	-		DZA65_RS21150	0.67	-1.2
4,573,216	+		DZA65_RS21150	0.74	-2.2
4,573,217	-		DZA65_RS21150	0.74	+1.6
4,573,217	-		DZA65_RS21150	0.74	+1.1
4,573,217	-		DZA65_RS21150	0.74	-1.1
4,573,218	+		DZA65_RS21150	0.74	+0.5
4,573,218	+		DZA65_RS21150	0.74	-0.5
4,573,218	+		DZA65_RS21150	0.74	+0.2
4,573,218	+		DZA65_RS21150	0.74	-0.2
4,573,218	+		DZA65_RS21150	0.74	+0.1
4,573,218	+		DZA65_RS21150	0.74	+0.1
4,573,218	+		DZA65_RS21150	0.74	+1.8
4,573,218	+		DZA65_RS21150	0.74	+1.1
4,573,218	+		DZA65_RS21150	0.74	+1.1
4,573,218	+		DZA65_RS21150	0.74	+0.3
4,573,218	+		DZA65_RS21150	0.74	+0.1
4,573,218	+		DZA65_RS21150	0.74	+1.1
4,573,218	+		DZA65_RS21150	0.74	+2.7
4,573,219	-		DZA65_RS21150	0.74	-0.1
4,573,219	-		DZA65_RS21150	0.74	+0.6
4,573,219	-		DZA65_RS21150	0.74	+0.3
4,573,219	-		DZA65_RS21150	0.74	+0.3
4,573,219	-		DZA65_RS21150	0.74	-1.7
4,573,219	-		DZA65_RS21150	0.74	+0.7
4,573,219	-		DZA65_RS21150	0.74	-0.3
4,573,219	-		DZA65_RS21150	0.74	+0.4
4,573,219	-		DZA65_RS21150	0.74	+0.5
4,573,219	-		DZA65_RS21150	0.74	-1.4
4,573,219	-		DZA65_RS21150	0.74	-1.9
4,573,219	-		DZA65_RS21150	0.74	+1.9
4,573,219	-		DZA65_RS21150	0.74	-0.1
4,573,219	-		DZA65_RS21150	0.74	-1.2
4,573,219	-		DZA65_RS21150	0.74	+0.1
4,573,219	-		DZA65_RS21150	0.74	+1.1
4,573,219	-		DZA65_RS21150	0.74	-1.5
4,573,219	-		DZA65_RS21150	0.74	+0.6
4,573,338	+				+1.1
4,573,338	+				+0.5
4,573,338	+				-0.9
4,573,338	+				-2.5
4,573,338	+				+0.1
4,573,338	+				+0.3
4,573,338	+				-0.4
4,573,338	+				-2.2
4,573,339	-				+0.1
4,573,339	-				-0.4
4,573,339	-				-0.6
4,573,339	-				+0.1
4,573,339	-				+0.3
4,573,339	-				+0.1
4,573,339	-				-0.9
4,573,339	-				-2.3
4,573,339	-				+2.9
4,573,339	-				-3.1
4,573,339	-				+0.7
4,573,339	-				+0.1
4,573,371	+				-0.3
4,573,371	+				-2.2
4,573,371	+				-1.2
4,573,371	+				+0.1
4,573,371	+				-1.8
4,573,371	+				-0.2
4,573,372	-				+1.1
4,573,372	-				-0.1
4,573,384	+				+1.6
4,573,385	-				+0.2
4,573,385	-				+0.9
4,573,397	+				+0.8
4,573,397	+				-0.4
4,573,397	+				-0.9
4,573,398	-				-0.1
4,573,403	+				-1.2
4,573,403	+				+0.4
4,573,403	+				+3.2
4,573,403	+				-2.6
4,573,403	+				-0.9
4,573,403	+				+0.5
4,573,403	+				+2.1
4,573,403	+				-0.1
4,573,403	+				+0.1
4,573,404	-				-0.5
4,573,404	-				-2.9
4,573,404	-				+0.1
4,573,404	-				+1.6
4,573,404	-				-0.2
4,573,404	-				-1.5
4,573,421	+				+2.1
4,573,421	+				+0.2
4,573,421	+				+1.3
4,573,421	+				-1.2
4,573,421	+				+1.1
4,573,422	-				-2.0
4,573,422	-				-1.3
4,573,464	+				+1.5
4,573,464	+				+0.2
4,573,464	+				+2.7
4,573,465	-				+0.8
4,573,494	+				-1.9
4,573,528	+				+0.7
4,573,528	+				+0.3
4,573,695	+		DZA65_RS21155	0.30	+0.7
4,573,695	+		DZA65_RS21155	0.30	+0.5
4,573,695	+		DZA65_RS21155	0.30	-0.9
4,573,695	+		DZA65_RS21155	0.30	-1.1
4,573,696	-		DZA65_RS21155	0.30	+0.3
4,573,696	-		DZA65_RS21155	0.30	+1.2
4,573,696	-		DZA65_RS21155	0.30	+0.4
4,573,696	-		DZA65_RS21155	0.30	-0.1
4,573,696	-		DZA65_RS21155	0.30	-2.6
4,573,749	+		DZA65_RS21155	0.37	-1.5
4,573,749	+		DZA65_RS21155	0.37	-0.5
4,573,749	+		DZA65_RS21155	0.37	-0.0
4,573,749	+		DZA65_RS21155	0.37	-0.0
4,573,749	+		DZA65_RS21155	0.37	+0.1
4,573,749	+		DZA65_RS21155	0.37	-0.9
4,573,750	-		DZA65_RS21155	0.37	-0.5
4,573,750	-		DZA65_RS21155	0.37	+0.9
4,573,750	-		DZA65_RS21155	0.37	-1.9
4,573,855	+		DZA65_RS21155	0.51	+1.8
4,573,855	+		DZA65_RS21155	0.51	+1.6
4,573,856	-		DZA65_RS21155	0.51	-2.2
4,573,856	-		DZA65_RS21155	0.51	+0.9
4,573,856	-		DZA65_RS21155	0.51	+0.4
4,573,856	-		DZA65_RS21155	0.51	+2.3
4,573,856	-		DZA65_RS21155	0.51	-0.3
4,573,876	+		DZA65_RS21155	0.53	+0.4
4,573,876	+		DZA65_RS21155	0.53	-0.3
4,573,877	-		DZA65_RS21155	0.53	+0.7
4,573,877	-		DZA65_RS21155	0.53	+0.3
4,573,877	-		DZA65_RS21155	0.53	-1.5
4,573,900	-		DZA65_RS21155	0.56	-1.7
4,573,900	-		DZA65_RS21155	0.56	+2.8
4,573,900	-		DZA65_RS21155	0.56	+0.5
4,573,900	-		DZA65_RS21155	0.56	+1.2
4,573,902	+		DZA65_RS21155	0.57	+1.4
4,573,902	+		DZA65_RS21155	0.57	+0.7
4,573,902	+		DZA65_RS21155	0.57	-0.9
4,573,902	+				+1.7
4,573,902	+		DZA65_RS21155	0.57	+0.3
4,573,902	+		DZA65_RS21155	0.57	-0.5
4,573,902	+		DZA65_RS21155	0.57	-0.5
4,573,902	+		DZA65_RS21155	0.57	+0.8
4,573,903	-		DZA65_RS21155	0.57	-0.7
4,573,908	+		DZA65_RS21155	0.57	+1.2
4,573,908	+		DZA65_RS21155	0.57	+1.3
4,573,908	+		DZA65_RS21155	0.57	-0.2
4,573,909	-		DZA65_RS21155	0.58	-0.2
4,573,926	+		DZA65_RS21155	0.60	+0.8
4,573,926	+		DZA65_RS21155	0.60	-0.9
4,573,926	+		DZA65_RS21155	0.60	+0.9
4,573,926	+		DZA65_RS21155	0.60	-1.9
4,574,040	+		DZA65_RS21155	0.75	+0.8
4,574,040	+		DZA65_RS21155	0.75	-2.2
4,574,040	+		DZA65_RS21155	0.75	+0.5
4,574,040	+		DZA65_RS21155	0.75	+0.6
4,574,040	+		DZA65_RS21155	0.75	+1.1
4,574,041	-		DZA65_RS21155	0.75	+1.1
4,574,041	-		DZA65_RS21155	0.75	-0.4
4,574,041	-		DZA65_RS21155	0.75	+0.4
4,574,041	-		DZA65_RS21155	0.75	-0.5
4,574,041	-		DZA65_RS21155	0.75	+0.4
4,574,122	-		DZA65_RS21155	0.85	-1.7
4,574,155	+		DZA65_RS21155	0.89	-1.2
4,574,204	+				+1.1
4,574,210	+				+1.1
4,574,238	+				+1.4
4,574,238	+				-0.9
4,574,238	+				+0.7
4,574,239	-				-1.8
4,574,239	-				-0.8
4,574,239	-				+2.2
4,574,239	-				-2.4
4,574,239	-				+0.5
4,574,241	-				-0.6
4,574,241	-				+0.2
4,574,258	+				-2.2
4,574,277	+				-0.2
4,574,277	+				+0.9
4,574,278	-				+0.8
4,574,368	+		DZA65_RS21160	0.24	-0.9
4,574,370	+		DZA65_RS21160	0.25	+0.1
4,574,371	-		DZA65_RS21160	0.25	-2.0