Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS19825

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,289,654	+		DZA65_RS19820	0.31	+0.5
4,289,654	+		DZA65_RS19820	0.31	-0.0
4,289,655	-		DZA65_RS19820	0.31	-1.8
4,289,670	-				+1.8
4,289,670	-		DZA65_RS19820	0.33	+0.4
4,289,676	+		DZA65_RS19820	0.34	-0.8
4,289,676	+				+1.0
4,289,676	+		DZA65_RS19820	0.34	-0.2
4,289,677	-		DZA65_RS19820	0.34	+1.0
4,289,694	-		DZA65_RS19820	0.36	+0.1
4,289,694	-		DZA65_RS19820	0.36	+2.8
4,289,703	+		DZA65_RS19820	0.37	-1.8
4,289,704	-		DZA65_RS19820	0.37	-1.3
4,289,704	-		DZA65_RS19820	0.37	-0.0
4,289,761	-		DZA65_RS19820	0.44	-2.0
4,289,801	+		DZA65_RS19820	0.49	-1.8
4,289,801	+		DZA65_RS19820	0.49	+1.5
4,289,801	+		DZA65_RS19820	0.49	-0.4
4,289,802	-		DZA65_RS19820	0.49	-0.6
4,289,802	-		DZA65_RS19820	0.49	+0.1
4,289,802	-		DZA65_RS19820	0.49	-1.3
4,289,802	-		DZA65_RS19820	0.49	-0.6
4,289,802	-		DZA65_RS19820	0.49	+2.9
4,289,808	-		DZA65_RS19820	0.50	+0.3
4,289,831	+		DZA65_RS19820	0.52	+1.5
4,289,831	+		DZA65_RS19820	0.52	-0.6
4,289,831	+		DZA65_RS19820	0.52	-1.0
4,289,832	-		DZA65_RS19820	0.53	-0.3
4,289,832	-		DZA65_RS19820	0.53	-0.4
4,289,834	+		DZA65_RS19820	0.53	+1.4
4,289,834	+		DZA65_RS19820	0.53	+1.0
4,289,834	+		DZA65_RS19820	0.53	-1.5
4,289,834	+		DZA65_RS19820	0.53	+0.1
4,289,834	+		DZA65_RS19820	0.53	+0.4
4,289,834	+		DZA65_RS19820	0.53	-0.1
4,289,835	-		DZA65_RS19820	0.53	+0.1
4,289,835	-		DZA65_RS19820	0.53	+1.1
4,289,835	-		DZA65_RS19820	0.53	-1.5
4,289,835	-		DZA65_RS19820	0.53	+0.2
4,289,835	-		DZA65_RS19820	0.53	-0.3
4,289,835	-		DZA65_RS19820	0.53	-0.8
4,289,867	+		DZA65_RS19820	0.57	+0.4
4,289,868	-		DZA65_RS19820	0.57	-0.1
4,289,875	+		DZA65_RS19820	0.58	+0.6
4,289,875	+		DZA65_RS19820	0.58	-0.9
4,289,875	+		DZA65_RS19820	0.58	-1.3
4,289,875	+		DZA65_RS19820	0.58	+0.8
4,289,875	+		DZA65_RS19820	0.58	+2.9
4,289,875	+		DZA65_RS19820	0.58	-1.0
4,289,875	+		DZA65_RS19820	0.58	+1.3
4,289,875	+		DZA65_RS19820	0.58	-1.6
4,289,875	+		DZA65_RS19820	0.58	-0.6
4,289,875	+		DZA65_RS19820	0.58	-2.0
4,289,875	+		DZA65_RS19820	0.58	+0.3
4,289,875	+		DZA65_RS19820	0.58	+0.7
4,289,875	+		DZA65_RS19820	0.58	+0.2
4,289,875	+		DZA65_RS19820	0.58	-0.1
4,289,875	+		DZA65_RS19820	0.58	-2.0
4,289,876	-		DZA65_RS19820	0.58	-0.7
4,289,876	-		DZA65_RS19820	0.58	+0.4
4,289,876	-		DZA65_RS19820	0.58	-1.3
4,289,876	-		DZA65_RS19820	0.58	-1.1
4,289,876	-		DZA65_RS19820	0.58	+1.3
4,289,876	-		DZA65_RS19820	0.58	+0.2
4,289,876	-		DZA65_RS19820	0.58	+1.0
4,289,876	-		DZA65_RS19820	0.58	-0.2
4,289,876	-		DZA65_RS19820	0.58	-0.2
4,289,876	-		DZA65_RS19820	0.58	-0.4
4,289,876	-		DZA65_RS19820	0.58	-0.6
4,289,876	-				+1.0
4,289,876	-		DZA65_RS19820	0.58	-0.6
4,289,878	+		DZA65_RS19820	0.58	+1.5
4,289,878	+		DZA65_RS19820	0.58	-0.4
4,289,879	-		DZA65_RS19820	0.58	-1.3
4,289,918	+		DZA65_RS19820	0.63	-1.2
4,289,919	-		DZA65_RS19820	0.63	+0.4
4,289,920	+		DZA65_RS19820	0.63	+1.8
4,289,921	-		DZA65_RS19820	0.63	-1.5
4,289,921	-		DZA65_RS19820	0.63	+2.7
4,289,930	+		DZA65_RS19820	0.64	+0.7
4,290,039	+		DZA65_RS19820	0.77	+1.0
4,290,039	+		DZA65_RS19820	0.77	-0.4
4,290,039	+		DZA65_RS19820	0.77	+0.0
4,290,040	-		DZA65_RS19820	0.77	+0.6
4,290,040	-		DZA65_RS19820	0.77	+1.8
4,290,040	-		DZA65_RS19820	0.77	-1.0
4,290,040	-		DZA65_RS19820	0.77	+1.5
4,290,040	-		DZA65_RS19820	0.77	+1.0
4,290,109	+		DZA65_RS19820	0.85	-0.4
4,290,109	+		DZA65_RS19820	0.85	+0.3
4,290,109	+		DZA65_RS19820	0.85	+0.8
4,290,109	+		DZA65_RS19820	0.85	+1.9
4,290,140	+		DZA65_RS19820	0.89	+0.4
4,290,140	+		DZA65_RS19820	0.89	+2.3
4,290,141	-		DZA65_RS19820	0.89	-0.6
4,290,141	-		DZA65_RS19820	0.89	-0.7
4,290,141	-		DZA65_RS19820	0.89	+0.2
4,290,169	+				-1.2
4,290,169	+				+0.2
4,290,170	-				+0.1
4,290,170	-				+1.7
4,290,170	-				+0.3
4,290,204	+				+0.9
4,290,204	+				+0.8
4,290,213	-				+1.1
4,290,213	-				+0.2
4,290,231	+				-0.4
4,290,232	-				-1.0
4,290,253	+				-1.3
4,290,277	+				-2.4
4,290,277	+				-0.2
4,290,277	+				-0.6
4,290,277	+				-1.0
4,290,277	+				-1.6
4,290,277	+				+0.7
4,290,278	-				-0.0
4,290,278	-				-1.3
4,290,278	-				+2.0
4,290,278	-				-0.1
4,290,278	-				-1.2
4,290,278	-				-0.8
4,290,278	-				+1.0
4,290,278	-				+0.9
4,290,296	+				-0.6
4,290,296	+				-0.2
4,290,297	-				+3.8
4,290,297	-				-0.0
4,290,318	+				-0.2
4,290,318	+				+0.6
4,290,318	+				+1.7
4,290,318	+				+1.4
4,290,318	+				-0.7
4,290,319	-				-0.0
4,290,320	+				-1.8
4,290,320	+				-0.0
4,290,320	+				-1.0
4,290,321	-				-1.6
4,290,321	-				+1.3
4,290,344	+				-0.4
4,290,345	-				-1.6
4,290,345	-				+1.0
4,290,368	+				-2.0
4,290,368	+				+1.9
4,290,369	-				+0.2
4,290,369	-				-0.1
4,290,369	-				+0.4
4,290,369	-				+0.3
4,290,379	+				-1.2
4,290,380	-				+1.4
4,290,404	+				-1.0
4,290,404	+				+1.3
4,290,405	-				-1.0
4,290,405	-				-0.2
4,290,424	-				-0.0
4,290,424	-				-0.0
4,290,424	-				+0.6
4,290,451	+				+1.4
4,290,452	-				+0.2
4,290,452	-				+0.6
4,290,457	-				-0.6
4,290,457	-				+1.4
4,290,457	-				-0.6
4,290,457	-				+0.4
4,290,457	-				-2.1
4,290,487	+				-0.3
4,290,487	+				+0.4
4,290,487	+				-0.3
4,290,488	-				-1.6
4,290,488	-				+0.3
4,290,488	-				-0.3
4,290,504	+				+0.5
4,290,504	+				+0.1
4,290,504	+				-0.0
4,290,504	+				+0.1
4,290,504	+				+1.5
4,290,504	+				+2.2
4,290,505	-				-1.3
4,290,505	-				+1.3
4,290,505	-				+1.0
4,290,509	+				-0.7
4,290,509	+				-0.0
4,290,509	+				+2.6
4,290,510	-				-0.6
4,290,510	-				+0.6
4,290,510	-				+1.0
4,290,510	-				+0.0
4,290,510	-				-1.0
4,290,510	-				+0.6
4,290,510	-				-0.1
4,290,542	-				-1.7
4,290,547	+				+1.0
4,290,547	+				-0.3
4,290,596	-				+1.6
4,290,623	+		DZA65_RS19825	0.12	+0.1
4,290,623	+		DZA65_RS19825	0.12	+0.3
4,290,623	+		DZA65_RS19825	0.12	-0.2
4,290,624	-		DZA65_RS19825	0.12	+2.3
4,290,658	+		DZA65_RS19825	0.16	-2.2
4,290,661	+		DZA65_RS19825	0.16	-0.2
4,290,662	-		DZA65_RS19825	0.16	+1.3
4,290,662	-		DZA65_RS19825	0.16	-0.4
4,290,662	-		DZA65_RS19825	0.16	-1.0
4,290,686	+		DZA65_RS19825	0.19	-1.3
4,290,687	-		DZA65_RS19825	0.19	-0.6
4,290,687	-		DZA65_RS19825	0.19	-0.0
4,290,689	+		DZA65_RS19825	0.19	-2.0
4,290,689	+		DZA65_RS19825	0.19	-0.6
4,290,689	+		DZA65_RS19825	0.19	+1.9
4,290,689	+		DZA65_RS19825	0.19	-0.6
4,290,701	+		DZA65_RS19825	0.20	+0.1
4,290,701	+		DZA65_RS19825	0.20	+0.4
4,290,702	-		DZA65_RS19825	0.20	+1.4
4,290,727	+		DZA65_RS19825	0.23	+0.3
4,290,728	-		DZA65_RS19825	0.23	+0.7
4,290,728	-		DZA65_RS19825	0.23	+0.4
4,290,728	-		DZA65_RS19825	0.23	-0.3
4,290,728	-		DZA65_RS19825	0.23	-1.3
4,290,759	+		DZA65_RS19825	0.27	-1.3
4,290,759	+		DZA65_RS19825	0.27	-0.5
4,290,760	-		DZA65_RS19825	0.27	+0.3
4,290,760	-		DZA65_RS19825	0.27	+0.1
4,290,760	-		DZA65_RS19825	0.27	+1.4
4,290,760	-		DZA65_RS19825	0.27	-0.6
4,290,760	-				-0.6
4,290,760	-		DZA65_RS19825	0.27	+0.1
4,290,768	+		DZA65_RS19825	0.28	-1.0
4,290,769	-		DZA65_RS19825	0.28	+1.4
4,290,769	-		DZA65_RS19825	0.28	+1.3
4,290,769	-		DZA65_RS19825	0.28	-3.1
4,290,769	-		DZA65_RS19825	0.28	+1.0
4,290,769	-		DZA65_RS19825	0.28	-1.3
4,290,784	-		DZA65_RS19825	0.29	-0.6
4,290,784	-		DZA65_RS19825	0.29	-0.6
4,290,784	-		DZA65_RS19825	0.29	-1.2
4,290,816	+		DZA65_RS19825	0.33	-0.0
4,290,816	+		DZA65_RS19825	0.33	+0.4
4,290,816	+		DZA65_RS19825	0.33	+0.7
4,290,816	+		DZA65_RS19825	0.33	-1.8
4,290,817	-		DZA65_RS19825	0.33	-0.2
4,290,817	-		DZA65_RS19825	0.33	-1.6
4,290,817	-		DZA65_RS19825	0.33	-0.3
4,290,817	-		DZA65_RS19825	0.33	-0.1
4,290,829	+		DZA65_RS19825	0.34	-0.6
4,290,830	-		DZA65_RS19825	0.34	-0.3
4,290,830	-		DZA65_RS19825	0.34	-2.3
4,290,871	+		DZA65_RS19825	0.39	+1.0
4,290,872	-		DZA65_RS19825	0.39	-0.0
4,290,872	-		DZA65_RS19825	0.39	-0.8
4,290,872	-		DZA65_RS19825	0.39	-0.3
4,290,872	-		DZA65_RS19825	0.39	+0.3
4,290,923	+		DZA65_RS19825	0.44	-1.3
4,290,923	+		DZA65_RS19825	0.44	-0.3
4,290,923	+		DZA65_RS19825	0.44	+1.0
4,290,923	+		DZA65_RS19825	0.44	-1.0
4,290,923	+		DZA65_RS19825	0.44	-0.6
4,290,923	+		DZA65_RS19825	0.44	-0.1
4,290,923	+		DZA65_RS19825	0.44	+2.0
4,290,923	+		DZA65_RS19825	0.44	-1.2
4,290,923	+		DZA65_RS19825	0.44	+0.2
4,290,923	+		DZA65_RS19825	0.44	-1.5
4,290,923	+		DZA65_RS19825	0.44	+0.3
4,290,924	-		DZA65_RS19825	0.45	+0.5
4,290,924	-		DZA65_RS19825	0.45	-1.0
4,290,924	-		DZA65_RS19825	0.45	+1.0
4,290,924	-		DZA65_RS19825	0.45	-0.6
4,290,924	-		DZA65_RS19825	0.45	-1.0
4,290,924	-		DZA65_RS19825	0.45	+0.7
4,290,924	-		DZA65_RS19825	0.45	-1.9
4,290,924	-		DZA65_RS19825	0.45	+0.1
4,290,935	+		DZA65_RS19825	0.46	+0.2
4,290,941	-		DZA65_RS19825	0.46	+0.1
4,291,090	+		DZA65_RS19825	0.63	-1.3
4,291,090	+		DZA65_RS19825	0.63	+0.7
4,291,090	+		DZA65_RS19825	0.63	+1.3
4,291,090	+		DZA65_RS19825	0.63	-2.7
4,291,090	+		DZA65_RS19825	0.63	-1.3
4,291,090	+		DZA65_RS19825	0.63	-0.0
4,291,091	-		DZA65_RS19825	0.63	-1.5
4,291,091	-		DZA65_RS19825	0.63	-0.1
4,291,091	-		DZA65_RS19825	0.63	+0.5
4,291,091	-		DZA65_RS19825	0.63	-1.3
4,291,095	+		DZA65_RS19825	0.63	+1.8
4,291,095	+		DZA65_RS19825	0.63	-1.4
4,291,095	+		DZA65_RS19825	0.63	-0.3
4,291,095	+		DZA65_RS19825	0.63	-1.0
4,291,095	+		DZA65_RS19825	0.63	-0.1
4,291,095	+		DZA65_RS19825	0.63	-0.9
4,291,095	+		DZA65_RS19825	0.63	+0.3
4,291,096	-		DZA65_RS19825	0.63	-1.8
4,291,096	-		DZA65_RS19825	0.63	+0.6
4,291,096	-		DZA65_RS19825	0.63	-0.5
4,291,135	+		DZA65_RS19825	0.68	+0.5
4,291,135	+		DZA65_RS19825	0.68	-0.1
4,291,151	+		DZA65_RS19825	0.69	+1.4
4,291,151	+		DZA65_RS19825	0.69	-2.7
4,291,151	+		DZA65_RS19825	0.69	+1.3
4,291,152	-		DZA65_RS19825	0.70	-1.3
4,291,152	-		DZA65_RS19825	0.70	+0.0
4,291,152	-		DZA65_RS19825	0.70	+1.7
4,291,171	+		DZA65_RS19825	0.72	+0.6
4,291,171	+		DZA65_RS19825	0.72	-0.0
4,291,171	+		DZA65_RS19825	0.72	-1.6
4,291,171	+		DZA65_RS19825	0.72	+1.3
4,291,171	+		DZA65_RS19825	0.72	+1.2
4,291,172	-		DZA65_RS19825	0.72	-1.3
4,291,172	-		DZA65_RS19825	0.72	+0.3
4,291,172	-		DZA65_RS19825	0.72	-1.8
4,291,172	-		DZA65_RS19825	0.72	+0.8
4,291,172	-		DZA65_RS19825	0.72	+0.6
4,291,172	-		DZA65_RS19825	0.72	+0.2
4,291,172	-		DZA65_RS19825	0.72	-1.4
4,291,172	-		DZA65_RS19825	0.72	-0.4
4,291,172	-		DZA65_RS19825	0.72	-0.0
4,291,172	-		DZA65_RS19825	0.72	-0.0
4,291,172	-		DZA65_RS19825	0.72	+0.8
4,291,216	+		DZA65_RS19825	0.77	+0.1
4,291,217	-		DZA65_RS19825	0.77	+1.0
4,291,217	-		DZA65_RS19825	0.77	+0.6
4,291,239	+		DZA65_RS19825	0.79	-0.3
4,291,239	+		DZA65_RS19825	0.79	-0.6
4,291,242	-		DZA65_RS19825	0.79	+0.3
4,291,272	+		DZA65_RS19825	0.83	-0.2
4,291,272	+		DZA65_RS19825	0.83	-0.0
4,291,272	+		DZA65_RS19825	0.83	-1.3
4,291,305	+		DZA65_RS19825	0.86	+0.5
4,291,305	+		DZA65_RS19825	0.86	-1.5
4,291,309	+		DZA65_RS19825	0.87	-0.7
4,291,310	-		DZA65_RS19825	0.87	+0.7
4,291,310	-		DZA65_RS19825	0.87	+0.4
4,291,310	-		DZA65_RS19825	0.87	+0.1
4,291,310	-		DZA65_RS19825	0.87	-0.2
4,291,310	-				+1.6
4,291,310	-		DZA65_RS19825	0.87	+0.4
4,291,310	-		DZA65_RS19825	0.87	+1.4
4,291,310	-		DZA65_RS19825	0.87	-0.6
4,291,310	-		DZA65_RS19825	0.87	-0.3
4,291,310	-		DZA65_RS19825	0.87	+1.7
4,291,310	-		DZA65_RS19825	0.87	-0.5
4,291,319	+		DZA65_RS19825	0.88	-0.8
4,291,320	-		DZA65_RS19825	0.88	-2.2
4,291,343	-				+1.6
4,291,356	-				+0.1
4,291,356	-				+0.4
4,291,356	-				-0.6
4,291,356	-				+0.3
4,291,376	-				-3.8
4,291,412	+				+0.4
4,291,428	+				-1.3
4,291,428	+				+0.5
4,291,429	-				-0.4
4,291,429	-				+2.1
4,291,432	+				+0.6
4,291,516	+				-2.3
4,291,516	+				+1.6
4,291,517	-				+0.3
4,291,517	-				-2.0
4,291,517	-				-1.1
4,291,517	-				+0.1
4,291,554	+				+1.2
4,291,563	+				-1.1
4,291,565	+				-0.5
4,291,566	-				-1.0
4,291,582	+				+0.6
4,291,597	-				-1.0
4,291,600	+				-2.6
4,291,641	-				-0.9
4,291,684	-				-0.0
4,291,689	+				+3.7
4,291,708	+				-1.3
4,291,708	+				+0.3
4,291,715	-				+0.9
4,291,717	-				-0.4
4,291,752	+				+1.0
4,291,753	-				-0.0
4,291,762	+				-1.3
4,291,762	+				+0.8
4,291,763	-				+1.2
4,291,763	-				+0.7
4,291,783	-				-2.3
4,291,794	+				+0.2
4,291,803	-				-0.0
4,291,850	+				+1.0
4,291,850	+				-1.3
4,291,861	+				-0.1
4,291,861	+				-0.7
4,291,862	-				-0.7
4,291,862	-				-0.9
4,291,862	-				+0.7
4,291,865	-				-1.0
4,291,865	-				+0.5
4,291,886	+				-0.4
4,291,887	-				-2.6
4,291,887	-				+1.1
4,291,953	+				+0.8
4,291,954	-				+0.8
4,291,962	+				+0.9
4,291,962	+				+1.4
4,291,963	-				+0.9
4,291,963	-				-1.8
4,291,968	+				+0.2
4,291,968	+				-0.2
4,291,968	+				-0.3
4,291,968	+				+1.1
4,291,969	-				-1.3
4,291,969	-				-0.0
4,291,969	-				-0.4
4,291,969	-				-0.9
4,291,970	+				+0.1
4,291,970	+				-1.5
4,291,970	+				+0.6
4,291,970	+				-0.6
4,291,970	+				-0.8
4,291,970	+				+1.7
4,291,970	+				-1.0
4,291,971	-				+1.2
4,291,971	-				-3.3
4,291,971	-				-0.3
4,291,971	-				-1.0
4,291,971	-				+1.0
4,291,971	-				-1.6
4,292,000	+				-2.6
4,292,000	+				-1.3
4,292,001	-				+1.2
4,292,025	+		DZA65_RS19835	0.11	+0.3
4,292,099	+		DZA65_RS19835	0.21	-0.3
4,292,100	-		DZA65_RS19835	0.22	+0.4
4,292,113	+		DZA65_RS19835	0.24	-0.7
4,292,114	-		DZA65_RS19835	0.24	-0.0
4,292,150	+		DZA65_RS19835	0.29	+0.8
4,292,151	-		DZA65_RS19835	0.29	-1.1
4,292,185	+		DZA65_RS19835	0.34	+1.1
4,292,186	-		DZA65_RS19835	0.34	+1.7
4,292,186	-		DZA65_RS19835	0.34	+2.0
4,292,186	-		DZA65_RS19835	0.34	+1.0
4,292,230	+		DZA65_RS19835	0.41	-0.1
4,292,230	+		DZA65_RS19835	0.41	+1.4
4,292,230	+		DZA65_RS19835	0.41	-0.5
4,292,231	-		DZA65_RS19835	0.41	-0.5
4,292,231	-		DZA65_RS19835	0.41	+3.3
4,292,231	-		DZA65_RS19835	0.41	-2.3
4,292,255	-		DZA65_RS19835	0.45	-1.5
4,292,255	-		DZA65_RS19835	0.45	+1.0
4,292,274	+		DZA65_RS19835	0.47	+1.4
4,292,274	+		DZA65_RS19835	0.47	+0.6
4,292,275	-		DZA65_RS19835	0.48	-1.2
4,292,312	-		DZA65_RS19835	0.53	-0.3
4,292,312	-		DZA65_RS19835	0.53	+0.4
4,292,387	+		DZA65_RS19835	0.64	+3.2
4,292,387	+		DZA65_RS19835	0.64	-1.8
4,292,405	+		DZA65_RS19835	0.67	+0.2
4,292,405	+		DZA65_RS19835	0.67	-1.0