Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS19760

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,278,482	+		DZA65_RS19755	0.18	+2.1
4,278,582	+		DZA65_RS19755	0.27	-1.6
4,278,594	+		DZA65_RS19755	0.28	-2.5
4,278,607	-		DZA65_RS19755	0.29	-1.2
4,278,716	+		DZA65_RS19755	0.38	-2.2
4,278,716	+		DZA65_RS19755	0.38	+2.0
4,278,756	-		DZA65_RS19755	0.42	+0.2
4,278,771	+		DZA65_RS19755	0.43	-0.6
4,278,790	-		DZA65_RS19755	0.45	-1.4
4,278,825	+		DZA65_RS19755	0.48	-2.9
4,278,834	+		DZA65_RS19755	0.49	-0.2
4,278,835	-		DZA65_RS19755	0.49	-0.0
4,278,898	+		DZA65_RS19755	0.55	+1.0
4,278,920	+		DZA65_RS19755	0.56	-1.0
4,278,920	+		DZA65_RS19755	0.56	-0.6
4,278,921	-		DZA65_RS19755	0.57	-2.0
4,278,921	-		DZA65_RS19755	0.57	-0.7
4,278,948	-		DZA65_RS19755	0.59	-0.6
4,279,028	-		DZA65_RS19755	0.66	+1.1
4,279,067	+				+1.6
4,279,068	-		DZA65_RS19755	0.70	+0.5
4,279,068	-		DZA65_RS19755	0.70	-2.5
4,279,106	+		DZA65_RS19755	0.73	-3.1
4,279,197	+		DZA65_RS19755	0.81	+1.8
4,279,198	-		DZA65_RS19755	0.81	-1.3
4,279,198	-		DZA65_RS19755	0.81	+2.0
4,279,270	+		DZA65_RS19755	0.88	+0.3
4,279,270	+		DZA65_RS19755	0.88	-0.5
4,279,270	+		DZA65_RS19755	0.88	+0.9
4,279,271	-		DZA65_RS19755	0.88	-1.2
4,279,271	-		DZA65_RS19755	0.88	+1.5
4,279,271	-		DZA65_RS19755	0.88	-2.0
4,279,337	+				+3.4
4,279,338	-				-2.5
4,279,366	+				-2.0
4,279,366	+				-1.6
4,279,367	-				+1.6
4,279,367	-				+2.0
4,279,406	+				-0.0
4,279,406	+				+0.4
4,279,406	+				-0.1
4,279,406	+				-0.6
4,279,406	+				+1.2
4,279,406	+				+0.3
4,279,406	+				+0.8
4,279,406	+				+0.6
4,279,406	+				-0.8
4,279,406	+				+0.6
4,279,406	+				+0.7
4,279,406	+				-1.0
4,279,406	+				-0.0
4,279,407	-				-1.3
4,279,407	-				-0.0
4,279,407	-				+0.7
4,279,407	-				-0.6
4,279,407	-				-0.1
4,279,407	-				-0.6
4,279,407	-				-1.3
4,279,407	-				+1.0
4,279,407	-				-1.3
4,279,407	-				+1.6
4,279,407	-				-0.6
4,279,407	-				+0.6
4,279,407	-				-1.5
4,279,408	+				+1.7
4,279,408	+				-2.5
4,279,409	-				-0.6
4,279,409	-				+2.4
4,279,452	+				+0.3
4,279,583	-		DZA65_RS19760	0.14	+1.0
4,279,583	-		DZA65_RS19760	0.14	+2.0
4,279,674	+		DZA65_RS19760	0.23	-2.2
4,279,675	-		DZA65_RS19760	0.24	+0.4
4,279,675	-		DZA65_RS19760	0.24	+0.4
4,279,675	-		DZA65_RS19760	0.24	-1.2
4,279,773	+		DZA65_RS19760	0.34	-0.6
4,279,773	+		DZA65_RS19760	0.34	+1.2
4,279,773	+		DZA65_RS19760	0.34	-1.6
4,279,773	+		DZA65_RS19760	0.34	+0.5
4,279,773	+		DZA65_RS19760	0.34	+1.0
4,279,773	+		DZA65_RS19760	0.34	-0.8
4,279,773	+		DZA65_RS19760	0.34	-1.5
4,279,773	+		DZA65_RS19760	0.34	-0.5
4,279,773	+		DZA65_RS19760	0.34	-0.9
4,279,773	+		DZA65_RS19760	0.34	-2.0
4,279,773	+		DZA65_RS19760	0.34	+2.0
4,279,774	-		DZA65_RS19760	0.34	+1.3
4,279,774	-		DZA65_RS19760	0.34	-1.0
4,279,774	-		DZA65_RS19760	0.34	-2.2
4,279,774	-		DZA65_RS19760	0.34	+1.7
4,279,774	-		DZA65_RS19760	0.34	-0.7
4,279,774	-		DZA65_RS19760	0.34	-1.6
4,279,774	-		DZA65_RS19760	0.34	-0.1
4,279,774	-		DZA65_RS19760	0.34	-1.5
4,279,774	-		DZA65_RS19760	0.34	-0.7
4,279,774	-		DZA65_RS19760	0.34	-0.0
4,279,774	-		DZA65_RS19760	0.34	-0.7
4,279,774	-		DZA65_RS19760	0.34	-0.2
4,279,777	+		DZA65_RS19760	0.35	-1.1
4,279,778	-		DZA65_RS19760	0.35	-1.1
4,279,818	+		DZA65_RS19760	0.39	-1.8
4,279,818	+		DZA65_RS19760	0.39	-2.0
4,279,818	+		DZA65_RS19760	0.39	+2.3
4,279,818	+		DZA65_RS19760	0.39	-0.3
4,279,818	+		DZA65_RS19760	0.39	+0.7
4,279,896	+		DZA65_RS19760	0.47	-0.6
4,279,896	+		DZA65_RS19760	0.47	-1.0
4,279,897	-		DZA65_RS19760	0.47	+1.4
4,280,079	+		DZA65_RS19760	0.67	-0.6
4,280,079	+		DZA65_RS19760	0.67	-0.4
4,280,079	+		DZA65_RS19760	0.67	+1.0
4,280,080	-		DZA65_RS19760	0.67	+0.5
4,280,091	+		DZA65_RS19760	0.68	+0.6
4,280,092	-		DZA65_RS19760	0.69	+3.2
4,280,092	-		DZA65_RS19760	0.69	-0.5
4,280,101	+		DZA65_RS19760	0.69	-1.0
4,280,101	+		DZA65_RS19760	0.69	+0.1
4,280,101	+		DZA65_RS19760	0.69	-0.5
4,280,102	-		DZA65_RS19760	0.70	+1.6
4,280,102	-		DZA65_RS19760	0.70	-2.2
4,280,102	-		DZA65_RS19760	0.70	-0.0
4,280,102	-		DZA65_RS19760	0.70	+0.7
4,280,102	-		DZA65_RS19760	0.70	-0.6
4,280,102	-		DZA65_RS19760	0.70	-0.7
4,280,173	+		DZA65_RS19760	0.77	-0.8
4,280,174	-		DZA65_RS19760	0.77	-0.6
4,280,174	-		DZA65_RS19760	0.77	-0.2
4,280,174	-		DZA65_RS19760	0.77	-1.7
4,280,175	+		DZA65_RS19760	0.77	-1.0
4,280,260	+		DZA65_RS19760	0.87	+0.1
4,280,260	+		DZA65_RS19760	0.87	+0.7
4,280,260	+		DZA65_RS19760	0.87	-0.7
4,280,261	-		DZA65_RS19760	0.87	-1.6
4,280,261	-		DZA65_RS19760	0.87	+0.3
4,280,261	-		DZA65_RS19760	0.87	+1.2
4,280,261	-		DZA65_RS19760	0.87	-1.6
4,280,261	-		DZA65_RS19760	0.87	-0.6
4,280,297	+				-0.7
4,280,297	+				-1.6
4,280,298	-				-1.1
4,280,298	-				-1.4
4,280,310	-				+0.7
4,280,416	-				+0.1
4,280,418	+				-0.3
4,280,418	+				+0.1
4,280,418	+				-0.2
4,280,418	+				+1.2
4,280,418	+				-2.2
4,280,418	+				+2.2
4,280,418	+				+0.2
4,280,418	+				-1.3
4,280,418	+				-0.6
4,280,418	+				-0.5
4,280,418	+				+1.8
4,280,419	-				-1.0
4,280,419	-				-2.0
4,280,419	-				+0.3
4,280,419	-				+0.5
4,280,419	-				-1.9
4,280,419	-				+1.4
4,280,419	-				-0.5
4,280,419	-				+0.8
4,280,419	-				-0.4
4,280,419	-				+1.4
4,280,419	-				+0.3
4,280,419	-				-0.1
4,280,419	-				-1.6
4,280,419	-				-2.3
4,280,419	-				-0.7
4,280,419	-				-0.0
4,280,419	-				-0.1
4,280,419	-				-1.6
4,280,419	-				+1.2
4,280,420	+				+0.3
4,280,420	+				+0.7
4,280,421	-				-2.1
4,280,421	-				+0.6
4,280,421	-				-1.3
4,280,421	-				-0.6
4,280,443	+				+2.0
4,280,443	+				+2.0
4,280,444	-				+0.3
4,280,444	-				-1.9
4,280,444	-				-0.0
4,280,444	-				-0.2
4,280,444	-				+1.6
4,280,444	-				+1.0
4,280,449	+				-0.2
4,280,450	-				+2.6
4,280,450	-				+0.4
4,280,454	+				+1.6
4,280,454	+				+0.6
4,280,454	+				+0.7
4,280,455	-				-1.5
4,280,455	-				+1.3
4,280,455	-				-2.2
4,280,632	-				-0.4
4,280,744	+				-0.0
4,280,744	+				-2.3
4,280,745	-				-0.7
4,280,745	-				+1.6
4,280,746	+				+0.7
4,280,747	-				+1.0
4,280,747	-				+1.5
4,280,747	-				-0.8
4,280,747	-				+0.1
4,280,750	-				+0.8
4,280,750	-				+0.4
4,280,789	-				-0.4
4,280,803	+				+1.3
4,280,803	+				-1.0
4,280,803	+				-2.3
4,280,804	-				+0.2
4,280,804	-				-0.6
4,280,804	-				+0.9
4,280,804	-				+2.0
4,280,804	-				-1.3
4,280,804	-				-0.3
4,280,863	+				+0.3
4,280,863	+				+0.3
4,280,863	+				-1.0
4,280,864	-				-0.4
4,280,871	+				+1.9
4,280,874	+				+0.7
4,280,874	+				+0.1
4,280,874	+				-2.4
4,280,874	+				-1.8
4,280,875	-				-0.9
4,280,875	-				-0.7
4,280,875	-				+0.4
4,280,875	-				-0.0
4,280,875	-				-0.6
4,280,875	-				-1.5
4,280,875	-				-2.2
4,280,875	-				+0.6
4,281,021	+		DZA65_RS19770	0.22	+0.1
4,281,021	+		DZA65_RS19770	0.22	+1.2
4,281,021	+		DZA65_RS19770	0.22	+0.2
4,281,022	-		DZA65_RS19770	0.22	-1.2
4,281,022	-		DZA65_RS19770	0.22	+2.6
4,281,114	+		DZA65_RS19770	0.34	-0.6
4,281,114	+		DZA65_RS19770	0.34	-0.0
4,281,114	+		DZA65_RS19770	0.34	-0.8
4,281,114	+		DZA65_RS19770	0.34	-2.3
4,281,114	+		DZA65_RS19770	0.34	-0.6
4,281,114	+		DZA65_RS19770	0.34	+1.6
4,281,114	+		DZA65_RS19770	0.34	+0.5
4,281,114	+		DZA65_RS19770	0.34	+0.9
4,281,114	+		DZA65_RS19770	0.34	-2.8
4,281,115	-		DZA65_RS19770	0.34	+1.8
4,281,115	-		DZA65_RS19770	0.34	+1.0
4,281,115	-		DZA65_RS19770	0.34	-0.9
4,281,115	-		DZA65_RS19770	0.34	-0.3
4,281,115	-		DZA65_RS19770	0.34	+0.2
4,281,115	-		DZA65_RS19770	0.34	+0.7
4,281,115	-		DZA65_RS19770	0.34	-0.8
4,281,115	-		DZA65_RS19770	0.34	+0.1
4,281,194	-		DZA65_RS19770	0.45	+1.6
4,281,206	+		DZA65_RS19770	0.47	-0.6
4,281,206	+		DZA65_RS19770	0.47	-1.5
4,281,207	-		DZA65_RS19770	0.47	-0.7
4,281,300	-		DZA65_RS19770	0.59	-0.8
4,281,300	-		DZA65_RS19770	0.59	+1.0
4,281,300	-		DZA65_RS19770	0.59	+0.4