Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS19185

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,146,421	+		DZA65_RS19175	0.76	-2.3
4,146,421	+		DZA65_RS19175	0.76	-1.4
4,146,439	+		DZA65_RS19175	0.77	-1.1
4,146,439	+		DZA65_RS19175	0.77	+0.3
4,146,439	+		DZA65_RS19175	0.77	-1.7
4,146,439	+		DZA65_RS19175	0.77	-0.5
4,146,440	-		DZA65_RS19175	0.78	+0.0
4,146,440	-		DZA65_RS19175	0.78	-1.0
4,146,440	-		DZA65_RS19175	0.78	-1.2
4,146,440	-		DZA65_RS19175	0.78	-0.5
4,146,440	-		DZA65_RS19175	0.78	-0.0
4,146,440	-		DZA65_RS19175	0.78	-0.3
4,146,526	+		DZA65_RS19175	0.86	+1.3
4,146,527	-		DZA65_RS19175	0.86	-0.5
4,146,527	-		DZA65_RS19175	0.86	+0.9
4,146,527	-		DZA65_RS19175	0.86	-0.9
4,146,527	-		DZA65_RS19175	0.86	-1.7
4,146,596	+				-0.1
4,146,602	+				+1.3
4,146,603	-				+0.6
4,146,611	-				-1.7
4,146,611	-				-0.1
4,146,624	-				-1.7
4,146,722	+				+1.6
4,146,745	+				+0.3
4,146,745	+				-2.4
4,146,746	-				-0.9
4,146,746	-				+0.6
4,146,746	-				-2.3
4,146,746	-				-0.7
4,146,778	+				+0.9
4,146,785	+				+0.3
4,146,785	+				-0.2
4,146,785	+				+0.3
4,146,785	+				-0.1
4,146,785	+				+0.8
4,146,785	+				-0.3
4,146,785	+				-0.7
4,146,785	+				+0.3
4,146,785	+				-2.1
4,146,785	+				-0.4
4,146,831	+				+0.0
4,146,831	+				-1.1
4,146,831	+				+0.1
4,146,832	-				+0.3
4,146,832	-				-2.1
4,146,832	-				-1.1
4,146,834	+				-0.7
4,146,834	+				-0.1
4,146,834	+				+0.3
4,146,835	-				+0.5
4,146,852	+				-1.1
4,146,852	+				-1.7
4,146,853	-				+0.3
4,146,853	-				+1.5
4,146,860	+				+1.4
4,146,860	+				-0.2
4,146,860	+				-0.4
4,146,861	-				+0.1
4,147,040	+		DZA65_RS19180	0.27	-0.6
4,147,040	+		DZA65_RS19180	0.27	-0.3
4,147,041	-		DZA65_RS19180	0.27	+1.5
4,147,042	+		DZA65_RS19180	0.27	+0.3
4,147,042	+		DZA65_RS19180	0.27	+1.2
4,147,042	+		DZA65_RS19180	0.27	-2.5
4,147,042	+		DZA65_RS19180	0.27	-0.5
4,147,042	+		DZA65_RS19180	0.27	-0.7
4,147,043	-		DZA65_RS19180	0.27	-2.0
4,147,043	-		DZA65_RS19180	0.27	-1.3
4,147,128	+		DZA65_RS19180	0.45	-1.0
4,147,129	-		DZA65_RS19180	0.45	+1.1
4,147,129	-		DZA65_RS19180	0.45	-0.7
4,147,129	-		DZA65_RS19180	0.45	-0.3
4,147,159	+		DZA65_RS19180	0.51	-1.4
4,147,159	+		DZA65_RS19180	0.51	-1.1
4,147,159	+		DZA65_RS19180	0.51	-2.0
4,147,159	+		DZA65_RS19180	0.51	-2.5
4,147,159	+		DZA65_RS19180	0.51	+0.2
4,147,160	-		DZA65_RS19180	0.51	-1.1
4,147,160	-		DZA65_RS19180	0.51	-0.4
4,147,160	-		DZA65_RS19180	0.51	-0.7
4,147,160	-		DZA65_RS19180	0.51	+0.0
4,147,160	-		DZA65_RS19180	0.51	+0.5
4,147,160	-		DZA65_RS19180	0.51	-1.7
4,147,160	-		DZA65_RS19180	0.51	-1.1
4,147,160	-		DZA65_RS19180	0.51	+0.2
4,147,160	-		DZA65_RS19180	0.51	-0.7
4,147,318	+		DZA65_RS19180	0.83	-0.8
4,147,319	-		DZA65_RS19180	0.83	+2.2
4,147,319	-		DZA65_RS19180	0.83	-1.7
4,147,391	+				-0.9
4,147,565	-				-0.5
4,147,590	+		DZA65_RS19185	0.11	-0.4
4,147,590	+		DZA65_RS19185	0.11	-1.9
4,147,591	-		DZA65_RS19185	0.11	-0.1
4,147,591	-		DZA65_RS19185	0.11	+0.6
4,147,591	-		DZA65_RS19185	0.11	-0.1
4,147,591	-		DZA65_RS19185	0.11	+0.1
4,147,591	-		DZA65_RS19185	0.11	+1.8
4,147,591	-		DZA65_RS19185	0.11	-1.9
4,147,632	+		DZA65_RS19185	0.13	+1.1
4,147,632	+		DZA65_RS19185	0.13	-0.1
4,147,632	+		DZA65_RS19185	0.13	+1.3
4,147,632	+		DZA65_RS19185	0.13	+1.9
4,147,632	+		DZA65_RS19185	0.13	+2.7
4,147,632	+		DZA65_RS19185	0.13	-0.1
4,147,633	-		DZA65_RS19185	0.13	-0.8
4,147,633	-		DZA65_RS19185	0.13	+0.8
4,147,633	-		DZA65_RS19185	0.13	-1.1
4,147,633	-		DZA65_RS19185	0.13	+0.1
4,147,633	-		DZA65_RS19185	0.13	+1.2
4,147,633	-		DZA65_RS19185	0.13	-0.8
4,147,633	-		DZA65_RS19185	0.13	+0.4
4,147,633	-		DZA65_RS19185	0.13	-1.7
4,147,656	+		DZA65_RS19185	0.15	+1.2
4,147,656	+		DZA65_RS19185	0.15	+1.3
4,147,656	+		DZA65_RS19185	0.15	-0.3
4,147,656	+		DZA65_RS19185	0.15	-0.1
4,147,656	+		DZA65_RS19185	0.15	-1.1
4,147,656	+		DZA65_RS19185	0.15	-1.3
4,147,656	+		DZA65_RS19185	0.15	-0.9
4,147,657	-		DZA65_RS19185	0.15	-2.1
4,147,657	-		DZA65_RS19185	0.15	+1.1
4,147,657	-		DZA65_RS19185	0.15	-1.5
4,147,731	+		DZA65_RS19185	0.19	-1.1
4,147,731	+		DZA65_RS19185	0.19	+0.2
4,147,732	-		DZA65_RS19185	0.19	-0.1
4,147,759	+		DZA65_RS19185	0.21	-0.8
4,147,759	+		DZA65_RS19185	0.21	+0.0
4,147,759	+		DZA65_RS19185	0.21	-1.1
4,147,772	-		DZA65_RS19185	0.21	+0.5
4,147,855	+		DZA65_RS19185	0.26	-1.1
4,147,905	+		DZA65_RS19185	0.29	+0.8
4,147,905	+		DZA65_RS19185	0.29	+0.6
4,147,906	-		DZA65_RS19185	0.29	-2.1
4,147,906	-		DZA65_RS19185	0.29	-0.1
4,147,908	+		DZA65_RS19185	0.29	-3.7
4,147,908	+		DZA65_RS19185	0.29	+0.1
4,147,909	-		DZA65_RS19185	0.29	+1.1
4,147,909	-		DZA65_RS19185	0.29	+0.6
4,147,909	-		DZA65_RS19185	0.29	+1.2
4,147,909	-		DZA65_RS19185	0.29	+0.0
4,147,909	-		DZA65_RS19185	0.29	+1.2
4,147,909	-		DZA65_RS19185	0.29	+2.7
4,147,953	+		DZA65_RS19185	0.32	-1.1
4,147,953	+		DZA65_RS19185	0.32	+0.2
4,147,953	+		DZA65_RS19185	0.32	-0.1
4,147,953	+		DZA65_RS19185	0.32	+0.7
4,147,953	+		DZA65_RS19185	0.32	-1.2
4,147,953	+		DZA65_RS19185	0.32	-1.4
4,147,953	+		DZA65_RS19185	0.32	-1.5
4,147,953	+		DZA65_RS19185	0.32	-0.9
4,147,954	-		DZA65_RS19185	0.32	-1.7
4,147,954	-		DZA65_RS19185	0.32	+1.8
4,147,954	-		DZA65_RS19185	0.32	+3.3
4,148,028	+		DZA65_RS19185	0.36	+1.1
4,148,028	+		DZA65_RS19185	0.36	+0.8
4,148,028	+		DZA65_RS19185	0.36	+0.7
4,148,029	-		DZA65_RS19185	0.36	-0.3
4,148,029	-		DZA65_RS19185	0.36	+0.7
4,148,029	-		DZA65_RS19185	0.36	+0.6
4,148,029	-		DZA65_RS19185	0.36	-0.4
4,148,029	-		DZA65_RS19185	0.36	-0.2
4,148,029	-		DZA65_RS19185	0.36	+0.6
4,148,029	-		DZA65_RS19185	0.36	-2.1
4,148,241	+		DZA65_RS19185	0.49	-1.2
4,148,241	+		DZA65_RS19185	0.49	-0.4
4,148,241	+		DZA65_RS19185	0.49	+0.9
4,148,241	+		DZA65_RS19185	0.49	-0.4
4,148,241	+				+2.1
4,148,241	+		DZA65_RS19185	0.49	-1.1
4,148,241	+		DZA65_RS19185	0.49	+0.2
4,148,242	-		DZA65_RS19185	0.49	-2.8
4,148,242	-		DZA65_RS19185	0.49	+0.4
4,148,242	-		DZA65_RS19185	0.49	+0.5
4,148,242	-		DZA65_RS19185	0.49	+0.5
4,148,242	-		DZA65_RS19185	0.49	+0.5
4,148,321	-		DZA65_RS19185	0.53	-2.5
4,148,331	+		DZA65_RS19185	0.54	+0.2
4,148,331	+		DZA65_RS19185	0.54	-1.0
4,148,331	+		DZA65_RS19185	0.54	+3.0
4,148,331	+		DZA65_RS19185	0.54	+1.4
4,148,331	+		DZA65_RS19185	0.54	+1.9
4,148,331	+		DZA65_RS19185	0.54	-0.0
4,148,331	+		DZA65_RS19185	0.54	-0.1
4,148,331	+		DZA65_RS19185	0.54	-2.2
4,148,331	+		DZA65_RS19185	0.54	-0.5
4,148,332	-		DZA65_RS19185	0.54	-1.4
4,148,332	-		DZA65_RS19185	0.54	-1.5
4,148,332	-		DZA65_RS19185	0.54	+0.8
4,148,332	-		DZA65_RS19185	0.54	-1.7
4,148,332	-		DZA65_RS19185	0.54	-2.3
4,148,332	-		DZA65_RS19185	0.54	+1.5
4,148,332	-		DZA65_RS19185	0.54	+2.6
4,148,332	-		DZA65_RS19185	0.54	-2.3
4,148,332	-		DZA65_RS19185	0.54	+1.5
4,148,332	-		DZA65_RS19185	0.54	+0.9
4,148,354	-		DZA65_RS19185	0.55	+0.2
4,148,488	-		DZA65_RS19185	0.63	-0.7
4,148,545	+		DZA65_RS19185	0.66	+0.4
4,148,545	+		DZA65_RS19185	0.66	-0.7
4,148,545	+		DZA65_RS19185	0.66	+2.1
4,148,545	+		DZA65_RS19185	0.66	-1.7
4,148,545	+		DZA65_RS19185	0.66	+0.3
4,148,545	+		DZA65_RS19185	0.66	-0.1
4,148,545	+		DZA65_RS19185	0.66	+0.8
4,148,545	+		DZA65_RS19185	0.66	+0.9
4,148,545	+		DZA65_RS19185	0.66	-1.2
4,148,545	+		DZA65_RS19185	0.66	+1.1
4,148,546	-		DZA65_RS19185	0.66	+1.0
4,148,546	-		DZA65_RS19185	0.66	-1.1
4,148,546	-		DZA65_RS19185	0.66	+1.5
4,148,546	-		DZA65_RS19185	0.66	-0.3
4,148,546	-		DZA65_RS19185	0.66	-1.2
4,148,546	-		DZA65_RS19185	0.66	+1.0
4,148,546	-		DZA65_RS19185	0.66	-0.2
4,148,546	-		DZA65_RS19185	0.66	+0.4
4,148,546	-		DZA65_RS19185	0.66	-0.0
4,148,546	-		DZA65_RS19185	0.66	+1.2
4,148,546	-		DZA65_RS19185	0.66	+0.1
4,148,546	-		DZA65_RS19185	0.66	+1.6
4,148,546	-		DZA65_RS19185	0.66	-0.1
4,148,568	+		DZA65_RS19185	0.68	+1.3
4,148,568	+		DZA65_RS19185	0.68	-2.4
4,148,568	+		DZA65_RS19185	0.68	-0.7
4,148,568	+		DZA65_RS19185	0.68	-1.4
4,148,569	-		DZA65_RS19185	0.68	-0.9
4,148,569	-		DZA65_RS19185	0.68	+4.0
4,148,569	-		DZA65_RS19185	0.68	+0.3
4,148,569	-		DZA65_RS19185	0.68	-1.1
4,148,569	-		DZA65_RS19185	0.68	-1.5
4,148,601	+		DZA65_RS19185	0.70	-2.5
4,148,602	-		DZA65_RS19185	0.70	-0.1
4,148,602	-		DZA65_RS19185	0.70	+1.7
4,148,602	-		DZA65_RS19185	0.70	+1.6
4,148,629	+		DZA65_RS19185	0.71	-0.1
4,148,630	-		DZA65_RS19185	0.71	-0.4
4,148,630	-		DZA65_RS19185	0.71	-0.0
4,148,630	-		DZA65_RS19185	0.71	+0.8
4,148,682	+		DZA65_RS19185	0.74	-0.3
4,148,682	+		DZA65_RS19185	0.74	+0.6
4,148,682	+		DZA65_RS19185	0.74	-0.4
4,148,682	+		DZA65_RS19185	0.74	+0.8
4,148,683	-		DZA65_RS19185	0.74	+1.9
4,148,683	-		DZA65_RS19185	0.74	+1.9
4,148,683	-		DZA65_RS19185	0.74	-0.9
4,148,683	-		DZA65_RS19185	0.74	-0.4
4,148,683	-		DZA65_RS19185	0.74	-0.3
4,148,683	-		DZA65_RS19185	0.74	+1.0
4,148,733	+		DZA65_RS19185	0.77	+0.9
4,148,734	-		DZA65_RS19185	0.77	+0.3
4,148,734	-		DZA65_RS19185	0.77	+0.3
4,148,734	-		DZA65_RS19185	0.77	+0.9
4,148,734	-		DZA65_RS19185	0.77	+0.4
4,148,734	-		DZA65_RS19185	0.77	-0.3
4,148,734	-		DZA65_RS19185	0.77	-2.7
4,148,734	-		DZA65_RS19185	0.77	-0.5
4,148,734	-		DZA65_RS19185	0.77	+4.1
4,148,734	-		DZA65_RS19185	0.77	-1.3
4,148,734	-		DZA65_RS19185	0.77	-2.2
4,148,793	+		DZA65_RS19185	0.81	-1.4
4,148,793	+		DZA65_RS19185	0.81	+1.9
4,148,851	+		DZA65_RS19185	0.84	+0.6
4,148,851	+		DZA65_RS19185	0.84	-0.4
4,148,852	-		DZA65_RS19185	0.84	-0.7
4,148,852	-		DZA65_RS19185	0.84	+0.7
4,148,853	+		DZA65_RS19185	0.84	-2.1
4,148,853	+		DZA65_RS19185	0.84	-0.5
4,148,853	+		DZA65_RS19185	0.84	-2.4
4,148,853	+		DZA65_RS19185	0.84	+1.1
4,148,853	+		DZA65_RS19185	0.84	+1.5
4,148,854	-		DZA65_RS19185	0.84	+1.0
4,148,854	-		DZA65_RS19185	0.84	-0.8
4,148,854	-		DZA65_RS19185	0.84	-0.5
4,148,854	-		DZA65_RS19185	0.84	+0.7
4,148,854	-		DZA65_RS19185	0.84	+1.9
4,148,854	-		DZA65_RS19185	0.84	+0.4
4,148,854	-		DZA65_RS19185	0.84	-1.1
4,148,854	-		DZA65_RS19185	0.84	+1.7
4,148,854	-		DZA65_RS19185	0.84	-0.5
4,148,940	+		DZA65_RS19185	0.89	+1.2
4,148,953	+				+0.4
4,148,953	+				+1.3
4,148,953	+				-0.1
4,148,953	+				+0.4
4,148,953	+				-0.7
4,148,953	+				+0.3
4,148,953	+				+2.4
4,148,953	+				+0.6
4,148,953	+				+1.7
4,148,953	+				-0.1
4,148,953	+				+0.9
4,148,953	+				+0.2
4,148,953	+				-0.3
4,148,954	-				+0.9
4,148,954	-				+1.8
4,148,954	-				+0.5
4,148,954	-				+1.3
4,148,954	-				-0.5
4,148,954	-				-1.7
4,148,954	-				-1.1
4,148,957	+				-0.7
4,148,957	+				+0.5
4,148,957	+				+1.6
4,148,958	-				+0.2
4,148,958	-				-0.7
4,148,958	-				+1.4
4,148,958	-				+1.1
4,148,958	-				-0.6
4,148,993	+				-2.8
4,148,993	+				-0.9
4,148,993	+				-0.0
4,148,994	-				-0.8
4,149,021	+				+0.9
4,149,021	+				-2.3
4,149,021	+				-2.1
4,149,021	+				+0.9
4,149,021	+				+1.1
4,149,021	+				-0.9
4,149,021	+				+1.0
4,149,021	+				-1.1
4,149,021	+				-0.7
4,149,022	-				+0.5
4,149,022	-				+1.0
4,149,022	-				+0.7
4,149,022	-				-0.9
4,149,022	-				-1.9
4,149,022	-				+1.0
4,149,022	-				-0.5
4,149,022	-				-3.1
4,149,025	+				-0.7
4,149,025	+				-0.2
4,149,026	-				-0.9
4,149,065	+				+0.9
4,149,065	+				-1.1
4,149,065	+				-0.3
4,149,066	-				+2.2
4,149,134	+				+0.9
4,149,134	+				+1.3
4,149,134	+				+0.3
4,149,134	+				+0.2
4,149,134	+				+0.3
4,149,134	+				-1.8
4,149,135	-				+0.3
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4,149,902	-				+0.3
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4,150,097	+		DZA65_RS19190	0.32	-0.3
4,150,097	+		DZA65_RS19190	0.32	+2.2