Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18485

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
3,981,967	-		DZA65_RS18480	0.70	-1.2
3,982,002	+		DZA65_RS18480	0.72	+1.1
3,982,002	+		DZA65_RS18480	0.72	-0.2
3,982,002	+		DZA65_RS18480	0.72	+1.5
3,982,270	-		DZA65_RS18480	0.84	+0.3
3,982,297	+		DZA65_RS18480	0.85	-0.3
3,982,298	-		DZA65_RS18480	0.85	+0.2
3,982,300	+		DZA65_RS18480	0.85	-0.2
3,982,300	+		DZA65_RS18480	0.85	+1.0
3,982,300	+		DZA65_RS18480	0.85	+0.4
3,982,300	+		DZA65_RS18480	0.85	-0.5
3,982,301	-		DZA65_RS18480	0.85	-1.0
3,982,301	-		DZA65_RS18480	0.85	-2.2
3,982,301	-		DZA65_RS18480	0.85	+0.2
3,982,301	-		DZA65_RS18480	0.85	+0.0
3,982,363	+		DZA65_RS18480	0.88	-2.0
3,982,404	+		DZA65_RS18480	0.90	+0.8
3,982,404	+		DZA65_RS18480	0.90	+0.7
3,982,404	+		DZA65_RS18480	0.90	-0.2
3,982,404	+		DZA65_RS18480	0.90	+1.2
3,982,404	+		DZA65_RS18480	0.90	-0.3
3,982,404	+		DZA65_RS18480	0.90	-1.2
3,982,404	+		DZA65_RS18480	0.90	-0.6
3,982,404	+		DZA65_RS18480	0.90	-1.8
3,982,405	-		DZA65_RS18480	0.90	+0.5
3,982,450	-				-0.4
3,982,531	+				+0.6
3,982,532	-				-2.8
3,982,539	-				-1.5
3,982,539	-				-0.7
3,982,587	+				+0.8
3,982,587	+				-0.2
3,982,587	+				-0.4
3,982,610	+				-0.1
3,982,611	-				-1.2
3,982,611	-				+0.2
3,982,611	-				+0.3
3,982,619	-				-0.4
3,982,619	-				-0.4
3,982,619	-				-1.2
3,982,619	-				-1.1
3,982,620	+				+0.4
3,982,620	+				-0.2
3,982,620	+				-0.6
3,982,620	+				-2.2
3,982,621	-				-1.9
3,982,621	-				-0.2
3,982,621	-				-2.5
3,982,621	-				-0.6
3,982,621	-				+1.1
3,982,621	-				-0.6
3,982,621	-				+0.1
3,982,638	+				+0.4
3,982,638	+				+3.8
3,982,638	+				-0.4
3,982,638	+				+0.9
3,982,638	+				-1.2
3,982,638	+				-0.9
3,982,638	+				-0.2
3,982,639	-				+0.3
3,982,639	-				+1.2
3,982,639	-				+0.5
3,982,639	-				+1.2
3,982,639	-				-1.8
3,982,644	+				-0.5
3,982,644	+				-0.5
3,982,644	+				-2.5
3,982,644	+				-0.8
3,982,644	+				+0.0
3,982,644	+				+0.8
3,982,644	+				+0.4
3,982,644	+				+0.8
3,982,644	+				+1.0
3,982,644	+				+0.2
3,982,645	-				-0.7
3,982,645	-				+0.3
3,982,645	-				-0.1
3,982,645	-				+0.5
3,982,662	+				+0.1
3,982,669	+				-0.5
3,982,670	-				-1.5
3,982,687	+				+0.0
3,982,688	-				+1.8
3,982,688	-				-1.1
3,982,710	+				+0.4
3,982,710	+				-2.2
3,982,710	+				+0.1
3,982,710	+				-0.6
3,982,710	+				-0.2
3,982,711	-				-1.2
3,982,711	-				-1.8
3,982,711	-				-0.2
3,982,770	+				-1.2
3,982,831	+				+0.2
3,982,831	+				+0.3
3,982,831	+				+0.0
3,982,831	+				+0.5
3,982,832	-				-0.8
3,982,837	-				+2.5
3,982,853	-				-1.2
3,982,914	+				+0.8
3,983,002	+				+0.2
3,983,002	+				+0.7
3,983,068	+				-1.8
3,983,068	+				-0.7
3,983,068	+				-1.2
3,983,068	+				-0.6
3,983,069	-				-2.8
3,983,069	-				+1.8
3,983,069	-				+0.5
3,983,072	+				-0.5
3,983,072	+				-0.4
3,983,072	+				+1.4
3,983,073	-				-1.4
3,983,073	-				-1.2
3,983,073	-				+0.3
3,983,073	-				+0.4
3,983,073	-				+1.3
3,983,073	-				+0.1
3,983,138	+		DZA65_RS18485	0.12	+0.5
3,983,138	+		DZA65_RS18485	0.12	-1.9
3,983,138	+		DZA65_RS18485	0.12	+0.2
3,983,138	+		DZA65_RS18485	0.12	+0.4
3,983,138	+		DZA65_RS18485	0.12	+0.5
3,983,138	+		DZA65_RS18485	0.12	-0.5
3,983,138	+		DZA65_RS18485	0.12	-0.0
3,983,138	+		DZA65_RS18485	0.12	-2.6
3,983,139	-		DZA65_RS18485	0.12	+0.1
3,983,139	-		DZA65_RS18485	0.12	+0.3
3,983,139	-		DZA65_RS18485	0.12	+0.6
3,983,139	-		DZA65_RS18485	0.12	-0.5
3,983,139	-		DZA65_RS18485	0.12	+0.2
3,983,140	+		DZA65_RS18485	0.13	-0.8
3,983,140	+		DZA65_RS18485	0.13	+0.4
3,983,140	+		DZA65_RS18485	0.13	+1.2
3,983,141	-		DZA65_RS18485	0.13	-1.2
3,983,203	+		DZA65_RS18485	0.17	-0.3
3,983,250	-		DZA65_RS18485	0.20	+0.0
3,983,279	+		DZA65_RS18485	0.22	+1.2
3,983,280	-		DZA65_RS18485	0.23	+0.5
3,983,315	+		DZA65_RS18485	0.25	-1.2
3,983,434	+		DZA65_RS18485	0.34	-0.2
3,983,434	+		DZA65_RS18485	0.34	+0.8
3,983,434	+		DZA65_RS18485	0.34	-0.5
3,983,434	+		DZA65_RS18485	0.34	-2.5
3,983,435	-		DZA65_RS18485	0.34	-0.2
3,983,435	-		DZA65_RS18485	0.34	+0.5
3,983,435	-		DZA65_RS18485	0.34	-0.1
3,983,435	-		DZA65_RS18485	0.34	-1.2
3,983,435	-		DZA65_RS18485	0.34	+0.1
3,983,435	-		DZA65_RS18485	0.34	-2.2
3,983,435	-		DZA65_RS18485	0.34	+0.4
3,983,435	-		DZA65_RS18485	0.34	-1.0
3,983,435	-		DZA65_RS18485	0.34	+1.4
3,983,435	-		DZA65_RS18485	0.34	+0.8
3,983,435	-		DZA65_RS18485	0.34	+0.3
3,983,449	+		DZA65_RS18485	0.35	+0.1
3,983,449	+		DZA65_RS18485	0.35	-1.2
3,983,452	+		DZA65_RS18485	0.35	-0.8
3,983,452	+		DZA65_RS18485	0.35	+1.3
3,983,453	-		DZA65_RS18485	0.35	-0.1
3,983,453	-		DZA65_RS18485	0.35	+0.6
3,983,453	-		DZA65_RS18485	0.35	+0.5
3,983,453	-		DZA65_RS18485	0.35	-0.1
3,983,453	-		DZA65_RS18485	0.35	-0.5
3,983,467	+		DZA65_RS18485	0.36	+1.1
3,983,467	+		DZA65_RS18485	0.36	-0.6
3,983,554	+		DZA65_RS18485	0.42	-0.2
3,983,555	-		DZA65_RS18485	0.42	+0.2
3,983,555	-		DZA65_RS18485	0.42	-1.0
3,983,563	+		DZA65_RS18485	0.43	+1.0
3,983,564	-		DZA65_RS18485	0.43	+1.2
3,983,590	+		DZA65_RS18485	0.45	-1.0
3,983,591	-		DZA65_RS18485	0.45	-1.4
3,983,618	+		DZA65_RS18485	0.47	-0.4
3,983,618	+				+0.8
3,983,619	-		DZA65_RS18485	0.47	+1.7
3,983,619	-		DZA65_RS18485	0.47	+0.1
3,983,619	-		DZA65_RS18485	0.47	-1.2
3,983,724	-		DZA65_RS18485	0.54	-0.8
3,983,799	+		DZA65_RS18485	0.60	+0.1
3,983,799	+		DZA65_RS18485	0.60	-0.5
3,983,800	-		DZA65_RS18485	0.60	-1.3
3,983,800	-		DZA65_RS18485	0.60	+1.2
3,983,831	+		DZA65_RS18485	0.62	-0.2
3,983,831	+		DZA65_RS18485	0.62	-2.2
3,983,832	-		DZA65_RS18485	0.62	+0.0
3,983,832	-		DZA65_RS18485	0.62	+1.9
3,983,832	-		DZA65_RS18485	0.62	-2.1
3,983,860	+		DZA65_RS18485	0.64	+0.5
3,983,860	+		DZA65_RS18485	0.64	-0.2
3,983,860	+		DZA65_RS18485	0.64	-2.0
3,983,860	+		DZA65_RS18485	0.64	-0.5
3,983,861	-		DZA65_RS18485	0.64	-0.2
3,983,861	-		DZA65_RS18485	0.64	+0.1
3,983,903	-		DZA65_RS18485	0.67	-1.4
3,983,956	+		DZA65_RS18485	0.71	-0.6
3,983,956	+		DZA65_RS18485	0.71	+1.2
3,983,956	+		DZA65_RS18485	0.71	-0.2
3,983,956	+		DZA65_RS18485	0.71	+0.0
3,983,957	-		DZA65_RS18485	0.71	-0.5
3,983,957	-		DZA65_RS18485	0.71	+0.8
3,983,957	-		DZA65_RS18485	0.71	-0.2
3,983,957	-		DZA65_RS18485	0.71	+0.0
3,983,957	-		DZA65_RS18485	0.71	+0.4
3,983,957	-		DZA65_RS18485	0.71	-0.3
3,983,978	-		DZA65_RS18485	0.72	-0.4
3,984,010	+		DZA65_RS18485	0.75	-0.6
3,984,010	+		DZA65_RS18485	0.75	-0.2
3,984,010	+		DZA65_RS18485	0.75	+1.5
3,984,011	-		DZA65_RS18485	0.75	+0.2
3,984,040	+		DZA65_RS18485	0.77	-0.4
3,984,041	-		DZA65_RS18485	0.77	-2.5
3,984,105	+		DZA65_RS18485	0.82	-0.2
3,984,105	+		DZA65_RS18485	0.82	+1.4
3,984,172	+		DZA65_RS18485	0.86	-1.7
3,984,173	-		DZA65_RS18485	0.86	-0.1
3,984,200	-		DZA65_RS18485	0.88	-0.1
3,984,202	+		DZA65_RS18485	0.88	-0.6
3,984,202	+		DZA65_RS18485	0.88	-0.6
3,984,202	+		DZA65_RS18485	0.88	-0.8
3,984,202	+		DZA65_RS18485	0.88	+2.4
3,984,203	-		DZA65_RS18485	0.89	-0.2
3,984,362	+				-1.5
3,984,463	+				-1.2
3,984,463	+				+0.3
3,984,463	+				+0.5
3,984,463	+				-2.0
3,984,463	+				-3.2
3,984,464	-				-0.2
3,984,464	-				+0.9
3,984,464	-				+0.7
3,984,464	-				-0.4
3,984,464	-				-3.6
3,984,523	+				+0.4
3,984,523	+				+0.1
3,984,523	+				+0.1
3,984,523	+				+2.4
3,984,523	+				-0.4
3,984,523	+				+0.6
3,984,523	+				-0.8
3,984,524	-				-2.0
3,984,524	-				+1.4
3,984,524	-				-0.7
3,984,527	+				-1.1
3,984,527	+				-0.2
3,984,527	+				-0.4
3,984,527	+				+1.6
3,984,527	+				-2.0
3,984,528	-				+1.1
3,984,528	-				-0.1
3,984,528	-				+1.0
3,984,528	-				+0.6
3,984,528	-				+0.2
3,984,595	+		DZA65_RS18490	0.12	+1.6
3,984,596	-		DZA65_RS18490	0.12	+0.6
3,984,610	-		DZA65_RS18490	0.13	+0.2
3,984,658	+		DZA65_RS18490	0.16	-0.2
3,984,658	+		DZA65_RS18490	0.16	+0.4
3,984,658	+		DZA65_RS18490	0.16	-0.4
3,984,760	+		DZA65_RS18490	0.23	-2.4
3,984,760	+		DZA65_RS18490	0.23	-2.3
3,984,760	+		DZA65_RS18490	0.23	-2.6
3,984,760	+		DZA65_RS18490	0.23	+0.5
3,984,760	+		DZA65_RS18490	0.23	+0.5
3,984,760	+		DZA65_RS18490	0.23	+0.8
3,984,760	+		DZA65_RS18490	0.23	-0.2
3,984,760	+		DZA65_RS18490	0.23	-0.9
3,984,760	+		DZA65_RS18490	0.23	+1.3
3,984,760	+		DZA65_RS18490	0.23	+1.4
3,984,760	+		DZA65_RS18490	0.23	+0.6
3,984,761	-		DZA65_RS18490	0.23	+1.2
3,984,761	-		DZA65_RS18490	0.23	+0.8
3,984,761	-		DZA65_RS18490	0.23	-0.2
3,984,761	-		DZA65_RS18490	0.23	-1.4
3,984,761	-		DZA65_RS18490	0.23	+0.2
3,984,761	-		DZA65_RS18490	0.23	+0.1
3,984,761	-		DZA65_RS18490	0.23	+0.1
3,984,761	-		DZA65_RS18490	0.23	-1.9
3,984,830	-				-1.2
3,984,913	+		DZA65_RS18490	0.33	+0.8
3,984,913	+		DZA65_RS18490	0.33	-0.2
3,984,913	+		DZA65_RS18490	0.33	+0.4
3,984,913	+		DZA65_RS18490	0.33	+0.5
3,984,913	+		DZA65_RS18490	0.33	+1.0
3,984,913	+		DZA65_RS18490	0.33	-0.7
3,984,913	+		DZA65_RS18490	0.33	+0.6
3,984,913	+		DZA65_RS18490	0.33	-0.8
3,984,913	+		DZA65_RS18490	0.33	+0.6
3,984,913	+		DZA65_RS18490	0.33	-2.0
3,984,913	+		DZA65_RS18490	0.33	+0.3
3,984,913	+		DZA65_RS18490	0.33	+0.8
3,984,913	+		DZA65_RS18490	0.33	-1.2
3,984,913	+		DZA65_RS18490	0.33	-0.5
3,984,913	+		DZA65_RS18490	0.33	+0.8
3,984,913	+		DZA65_RS18490	0.33	-1.5
3,984,913	+		DZA65_RS18490	0.33	-1.2
3,984,913	+		DZA65_RS18490	0.33	-0.3
3,984,914	-		DZA65_RS18490	0.33	+2.3
3,984,914	-		DZA65_RS18490	0.33	-1.8
3,984,914	-		DZA65_RS18490	0.33	+0.6
3,984,914	-		DZA65_RS18490	0.33	-0.6
3,984,914	-		DZA65_RS18490	0.33	+0.5
3,984,914	-		DZA65_RS18490	0.33	-2.6
3,984,914	-		DZA65_RS18490	0.33	-0.8
3,984,914	-		DZA65_RS18490	0.33	+0.0
3,984,914	-		DZA65_RS18490	0.33	+0.0
3,984,914	-		DZA65_RS18490	0.33	-1.5
3,984,914	-		DZA65_RS18490	0.33	+2.4
3,984,914	-		DZA65_RS18490	0.33	-0.8
3,984,914	-		DZA65_RS18490	0.33	-0.6
3,984,914	-		DZA65_RS18490	0.33	+0.8
3,984,914	-		DZA65_RS18490	0.33	+0.7
3,984,914	-		DZA65_RS18490	0.33	+0.8
3,984,916	+		DZA65_RS18490	0.33	+0.8
3,984,916	+		DZA65_RS18490	0.33	-0.8
3,984,916	+		DZA65_RS18490	0.33	-0.8
3,984,916	+		DZA65_RS18490	0.33	+0.6
3,984,916	+		DZA65_RS18490	0.33	-2.4
3,984,916	+		DZA65_RS18490	0.33	+0.1
3,984,916	+		DZA65_RS18490	0.33	+0.3
3,984,916	+		DZA65_RS18490	0.33	-1.5
3,984,916	+		DZA65_RS18490	0.33	+0.2
3,984,916	+		DZA65_RS18490	0.33	-0.8
3,984,917	-		DZA65_RS18490	0.34	-0.7
3,984,917	-		DZA65_RS18490	0.34	-2.6
3,984,917	-		DZA65_RS18490	0.34	+0.3
3,984,917	-		DZA65_RS18490	0.34	+0.2
3,984,917	-		DZA65_RS18490	0.34	-0.5
3,984,917	-		DZA65_RS18490	0.34	-0.1
3,984,917	-		DZA65_RS18490	0.34	+0.6
3,984,917	-		DZA65_RS18490	0.34	-0.8
3,984,917	-		DZA65_RS18490	0.34	-1.2
3,984,931	+		DZA65_RS18490	0.34	-1.0
3,984,931	+		DZA65_RS18490	0.34	-1.4
3,984,931	+		DZA65_RS18490	0.34	+0.3
3,984,931	+		DZA65_RS18490	0.34	+1.1
3,984,932	-		DZA65_RS18490	0.35	-0.9
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3,985,168	-		DZA65_RS18490	0.50	+0.1
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3,985,283	-		DZA65_RS18490	0.58	+0.6
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3,985,327	+		DZA65_RS18490	0.61	+0.0
3,985,328	-				+1.2
3,985,346	-		DZA65_RS18490	0.62	+0.4