Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17510

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
3,771,986	+		DZA65_RS17505	0.40	+0.0
3,771,986	+		DZA65_RS17505	0.40	+0.1
3,771,986	+		DZA65_RS17505	0.40	+1.2
3,771,986	+		DZA65_RS17505	0.40	-1.3
3,771,986	+		DZA65_RS17505	0.40	+0.1
3,771,987	-		DZA65_RS17505	0.40	-0.4
3,771,987	-		DZA65_RS17505	0.40	-0.7
3,772,012	+		DZA65_RS17505	0.42	+0.2
3,772,028	+		DZA65_RS17505	0.44	-0.4
3,772,028	+		DZA65_RS17505	0.44	-0.6
3,772,029	-		DZA65_RS17505	0.44	+1.1
3,772,029	-		DZA65_RS17505	0.44	-1.0
3,772,029	-		DZA65_RS17505	0.44	+0.2
3,772,029	-		DZA65_RS17505	0.44	+0.3
3,772,029	-		DZA65_RS17505	0.44	-1.8
3,772,160	+		DZA65_RS17505	0.57	+0.7
3,772,161	-		DZA65_RS17505	0.57	-1.6
3,772,161	-		DZA65_RS17505	0.57	-0.8
3,772,232	+		DZA65_RS17505	0.64	-1.4
3,772,232	+		DZA65_RS17505	0.64	-1.3
3,772,232	+		DZA65_RS17505	0.64	+0.3
3,772,232	+		DZA65_RS17505	0.64	-2.7
3,772,232	+		DZA65_RS17505	0.64	-1.7
3,772,232	+		DZA65_RS17505	0.64	-0.5
3,772,232	+		DZA65_RS17505	0.64	-0.5
3,772,233	-		DZA65_RS17505	0.64	-0.7
3,772,233	-		DZA65_RS17505	0.64	-0.7
3,772,233	-		DZA65_RS17505	0.64	+0.1
3,772,233	-		DZA65_RS17505	0.64	+2.0
3,772,233	-		DZA65_RS17505	0.64	-2.7
3,772,233	-		DZA65_RS17505	0.64	+1.1
3,772,233	-		DZA65_RS17505	0.64	-1.1
3,772,233	-		DZA65_RS17505	0.64	+0.1
3,772,233	-		DZA65_RS17505	0.64	-0.4
3,772,233	-		DZA65_RS17505	0.64	-1.6
3,772,283	+		DZA65_RS17505	0.69	+0.4
3,772,283	+		DZA65_RS17505	0.69	+0.0
3,772,283	+		DZA65_RS17505	0.69	+1.1
3,772,284	-		DZA65_RS17505	0.70	-0.8
3,772,284	-		DZA65_RS17505	0.70	+0.2
3,772,284	-		DZA65_RS17505	0.70	-0.4
3,772,284	-		DZA65_RS17505	0.70	-0.7
3,772,433	+		DZA65_RS17505	0.85	-1.1
3,772,433	+		DZA65_RS17505	0.85	+3.3
3,772,433	+		DZA65_RS17505	0.85	+0.4
3,772,433	+		DZA65_RS17505	0.85	-0.3
3,772,433	+		DZA65_RS17505	0.85	-0.9
3,772,434	-		DZA65_RS17505	0.85	+1.1
3,772,434	-		DZA65_RS17505	0.85	+0.1
3,772,434	-		DZA65_RS17505	0.85	-0.5
3,772,434	-		DZA65_RS17505	0.85	+2.0
3,772,434	-		DZA65_RS17505	0.85	+1.5
3,772,434	-		DZA65_RS17505	0.85	-0.3
3,772,434	-		DZA65_RS17505	0.85	+0.2
3,772,434	-		DZA65_RS17505	0.85	-1.0
3,772,438	+		DZA65_RS17505	0.85	+1.2
3,772,439	-		DZA65_RS17505	0.85	-0.7
3,772,439	-		DZA65_RS17505	0.85	+1.2
3,772,614	+				-0.4
3,772,614	+				+1.0
3,772,614	+				+0.1
3,772,614	+				-1.3
3,772,614	+				+0.7
3,772,614	+				+2.0
3,772,614	+				-0.2
3,772,614	+				+0.3
3,772,614	+				-2.3
3,772,614	+				+1.8
3,772,615	-				-0.5
3,772,615	-				+1.8
3,772,615	-				+0.0
3,772,615	-				-1.4
3,772,615	-				+0.7
3,772,615	-				-2.1
3,772,615	-				+0.3
3,772,615	-				-1.5
3,772,645	-				-0.6
3,772,645	-				+0.3
3,772,653	-				-0.1
3,772,661	-				-1.8
3,772,661	-				+1.6
3,772,681	+				+0.7
3,772,730	+				-1.1
3,772,730	+				+0.7
3,772,730	+				+1.0
3,772,730	+				-1.6
3,772,731	-				-0.2
3,772,731	-				+1.5
3,772,731	-				-1.8
3,772,736	+				-2.3
3,772,736	+				-0.5
3,772,736	+				+0.7
3,772,736	+				+0.3
3,772,736	+				-0.6
3,772,736	+				+0.5
3,772,736	+				-0.1
3,772,737	-				+0.1
3,772,737	-				-0.1
3,772,737	-				-1.4
3,772,737	-				+2.4
3,772,737	-				-1.1
3,772,737	-				-0.0
3,772,737	-				+0.2
3,772,747	-				-0.0
3,772,747	-				-0.7
3,772,791	+				+0.4
3,772,791	+				+0.7
3,772,791	+				+0.3
3,772,792	-				+1.0
3,772,792	-				-1.3
3,772,852	+				+2.1
3,772,852	+				+1.9
3,772,852	+				+0.4
3,772,853	-				-0.3
3,772,853	-				+0.7
3,772,853	-				-2.3
3,772,853	-				+0.7
3,772,853	-				-1.4
3,772,867	+				+1.7
3,772,867	+				+1.0
3,772,867	+				+0.1
3,772,952	+				-0.0
3,772,952	+				-0.9
3,772,952	+				-0.7
3,772,953	-				-0.2
3,772,953	-				-0.8
3,772,959	+				-0.8
3,772,959	+				-1.3
3,772,959	+				+0.3
3,772,960	-				-1.8
3,773,005	+				+0.5
3,773,005	+				+0.1
3,773,005	+				+1.2
3,773,005	+				+0.0
3,773,005	+				+1.7
3,773,005	+				+0.7
3,773,005	+				+0.4
3,773,005	+				+0.5
3,773,006	-				-1.2
3,773,006	-				-3.2
3,773,006	-				-2.4
3,773,006	-				+1.7
3,773,033	+				-0.1
3,773,034	-				+0.2
3,773,034	-				+1.5
3,773,136	+		DZA65_RS17510	0.11	+0.3
3,773,152	+		DZA65_RS17510	0.12	+1.6
3,773,153	-		DZA65_RS17510	0.12	-0.7
3,773,153	-		DZA65_RS17510	0.12	+1.0
3,773,153	-		DZA65_RS17510	0.12	+0.7
3,773,177	-		DZA65_RS17510	0.14	+0.5
3,773,212	+		DZA65_RS17510	0.17	+0.5
3,773,257	+		DZA65_RS17510	0.20	-0.3
3,773,257	+		DZA65_RS17510	0.20	-2.0
3,773,257	+		DZA65_RS17510	0.20	+0.5
3,773,258	-		DZA65_RS17510	0.20	-0.6
3,773,282	+				+1.5
3,773,282	+		DZA65_RS17510	0.21	-0.3
3,773,282	+		DZA65_RS17510	0.21	-1.8
3,773,282	+		DZA65_RS17510	0.21	+1.6
3,773,282	+		DZA65_RS17510	0.21	-1.0
3,773,283	-		DZA65_RS17510	0.22	-0.0
3,773,283	-		DZA65_RS17510	0.22	-0.8
3,773,283	-		DZA65_RS17510	0.22	+0.7
3,773,675	+		DZA65_RS17510	0.49	-0.8
3,773,760	+		DZA65_RS17510	0.55	+0.1
3,773,760	+		DZA65_RS17510	0.55	-0.2
3,773,760	+		DZA65_RS17510	0.55	-1.6
3,773,760	+		DZA65_RS17510	0.55	-0.3
3,773,760	+		DZA65_RS17510	0.55	+0.7
3,773,760	+		DZA65_RS17510	0.55	-0.3
3,773,760	+		DZA65_RS17510	0.55	+2.3
3,773,760	+		DZA65_RS17510	0.55	+0.0
3,773,761	-		DZA65_RS17510	0.55	+1.9
3,773,761	-		DZA65_RS17510	0.55	+2.7
3,773,761	-		DZA65_RS17510	0.55	-0.2
3,773,761	-		DZA65_RS17510	0.55	+1.7
3,773,761	-		DZA65_RS17510	0.55	-0.8
3,773,843	+		DZA65_RS17510	0.61	-1.6
3,773,910	-		DZA65_RS17510	0.66	+0.7
3,773,910	-		DZA65_RS17510	0.66	+1.6
3,773,910	-		DZA65_RS17510	0.66	+1.3
3,773,937	-		DZA65_RS17510	0.67	-0.9
3,773,995	+		DZA65_RS17510	0.72	-0.3
3,773,996	-		DZA65_RS17510	0.72	+0.5
3,773,996	-		DZA65_RS17510	0.72	+5.3
3,773,999	+		DZA65_RS17510	0.72	-2.3
3,773,999	+		DZA65_RS17510	0.72	+0.6
3,773,999	+		DZA65_RS17510	0.72	-1.1
3,773,999	+		DZA65_RS17510	0.72	-0.4
3,773,999	+		DZA65_RS17510	0.72	+2.0
3,773,999	+		DZA65_RS17510	0.72	-0.8
3,773,999	+		DZA65_RS17510	0.72	+0.3
3,773,999	+		DZA65_RS17510	0.72	+2.7
3,773,999	+		DZA65_RS17510	0.72	-0.2
3,773,999	+		DZA65_RS17510	0.72	-2.3
3,773,999	+		DZA65_RS17510	0.72	+0.5
3,773,999	+		DZA65_RS17510	0.72	+0.2
3,773,999	+		DZA65_RS17510	0.72	+0.3
3,773,999	+		DZA65_RS17510	0.72	+0.5
3,774,000	-		DZA65_RS17510	0.72	-0.3
3,774,000	-		DZA65_RS17510	0.72	+0.4
3,774,000	-		DZA65_RS17510	0.72	+1.9
3,774,000	-		DZA65_RS17510	0.72	+0.3
3,774,000	-		DZA65_RS17510	0.72	+1.0
3,774,000	-		DZA65_RS17510	0.72	-1.7
3,774,000	-		DZA65_RS17510	0.72	-0.3
3,774,000	-		DZA65_RS17510	0.72	-0.4
3,774,000	-		DZA65_RS17510	0.72	+0.0
3,774,000	-		DZA65_RS17510	0.72	-2.1
3,774,000	-		DZA65_RS17510	0.72	-0.3
3,774,000	-		DZA65_RS17510	0.72	+1.9
3,774,000	-		DZA65_RS17510	0.72	-0.8
3,774,000	-		DZA65_RS17510	0.72	+1.7
3,774,000	-		DZA65_RS17510	0.72	+1.5
3,774,000	-		DZA65_RS17510	0.72	+0.3
3,774,000	-		DZA65_RS17510	0.72	-0.8
3,774,000	-		DZA65_RS17510	0.72	+0.9
3,774,000	-		DZA65_RS17510	0.72	-1.1
3,774,065	+		DZA65_RS17510	0.76	+0.1
3,774,065	+		DZA65_RS17510	0.76	+1.7
3,774,065	+		DZA65_RS17510	0.76	-0.2
3,774,065	+		DZA65_RS17510	0.76	-0.8
3,774,065	+		DZA65_RS17510	0.76	+2.3
3,774,097	+		DZA65_RS17510	0.79	+0.7
3,774,097	+		DZA65_RS17510	0.79	-1.0
3,774,098	-		DZA65_RS17510	0.79	+0.1
3,774,098	-		DZA65_RS17510	0.79	+1.5
3,774,123	-		DZA65_RS17510	0.80	+0.7
3,774,399	-				+0.4
3,774,399	-				+2.1
3,774,399	-				+0.4
3,774,544	+				+1.9
3,774,632	-				-0.8
3,774,790	+				+0.7
3,774,824	-				-1.3
3,774,824	-				+0.5
3,774,824	-				+1.2
3,774,824	-				+1.0
3,774,824	-				+0.6
3,774,834	+				+0.2
3,774,835	-				+1.2
3,774,841	+				+0.1
3,774,910	+				-0.3
3,774,997	+		DZA65_RS17515	0.11	-0.3
3,774,997	+		DZA65_RS17515	0.11	-1.2
3,775,084	+		DZA65_RS17515	0.18	+0.1
3,775,084	+		DZA65_RS17515	0.18	+0.9
3,775,084	+		DZA65_RS17515	0.18	+0.5
3,775,085	-		DZA65_RS17515	0.18	-1.2
3,775,085	-		DZA65_RS17515	0.18	+0.0
3,775,088	+		DZA65_RS17515	0.18	+0.2
3,775,088	+		DZA65_RS17515	0.18	+0.7
3,775,088	+		DZA65_RS17515	0.18	-1.3
3,775,088	+		DZA65_RS17515	0.18	+1.2
3,775,088	+		DZA65_RS17515	0.18	-0.3
3,775,088	+		DZA65_RS17515	0.18	+0.9
3,775,088	+		DZA65_RS17515	0.18	-2.4
3,775,088	+		DZA65_RS17515	0.18	+0.5
3,775,088	+		DZA65_RS17515	0.18	+0.3
3,775,089	-		DZA65_RS17515	0.18	-2.5
3,775,089	-		DZA65_RS17515	0.18	+1.5
3,775,089	-		DZA65_RS17515	0.18	-1.6
3,775,089	-		DZA65_RS17515	0.18	+1.5
3,775,089	-		DZA65_RS17515	0.18	-1.3
3,775,089	-		DZA65_RS17515	0.18	+2.0
3,775,089	-		DZA65_RS17515	0.18	-1.6
3,775,089	-		DZA65_RS17515	0.18	-0.1
3,775,117	+		DZA65_RS17515	0.20	+0.4
3,775,342	+		DZA65_RS17515	0.36	-2.1
3,775,343	-		DZA65_RS17515	0.36	+0.6