Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15055

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
3,283,733	+		DZA65_RS15050	0.28	-1.2
3,283,734	-				-0.4
3,283,734	-		DZA65_RS15050	0.28	-0.5
3,283,734	-		DZA65_RS15050	0.28	-0.1
3,283,744	+		DZA65_RS15050	0.29	+0.8
3,283,744	+		DZA65_RS15050	0.29	-1.2
3,283,744	+		DZA65_RS15050	0.29	-1.4
3,283,744	+		DZA65_RS15050	0.29	-0.0
3,283,744	+		DZA65_RS15050	0.29	-1.2
3,283,745	-		DZA65_RS15050	0.29	-1.1
3,283,745	-		DZA65_RS15050	0.29	-0.6
3,283,745	-		DZA65_RS15050	0.29	-3.2
3,283,745	-		DZA65_RS15050	0.29	-0.2
3,283,750	+		DZA65_RS15050	0.29	-1.2
3,283,750	+		DZA65_RS15050	0.29	+2.2
3,283,750	+		DZA65_RS15050	0.29	+0.6
3,283,750	+		DZA65_RS15050	0.29	+0.2
3,283,751	-		DZA65_RS15050	0.29	-0.0
3,283,751	-		DZA65_RS15050	0.29	+0.1
3,283,751	-		DZA65_RS15050	0.29	+1.2
3,283,751	-		DZA65_RS15050	0.29	-1.2
3,283,751	-		DZA65_RS15050	0.29	-1.2
3,283,751	-		DZA65_RS15050	0.29	-0.7
3,283,817	+		DZA65_RS15050	0.34	-1.3
3,283,818	-		DZA65_RS15050	0.34	+2.2
3,283,818	-		DZA65_RS15050	0.34	-0.4
3,283,829	-		DZA65_RS15050	0.35	+0.4
3,283,856	-		DZA65_RS15050	0.37	+0.8
3,283,888	+		DZA65_RS15050	0.39	+1.8
3,283,888	+		DZA65_RS15050	0.39	-1.7
3,283,888	+		DZA65_RS15050	0.39	-1.7
3,283,888	+		DZA65_RS15050	0.39	-0.7
3,283,889	-		DZA65_RS15050	0.39	-2.0
3,283,889	-		DZA65_RS15050	0.39	+2.2
3,283,889	-		DZA65_RS15050	0.39	+0.4
3,283,889	-		DZA65_RS15050	0.39	-0.7
3,283,889	-		DZA65_RS15050	0.39	-1.4
3,283,931	-		DZA65_RS15050	0.42	+0.4
3,283,969	+		DZA65_RS15050	0.45	-1.4
3,283,969	+		DZA65_RS15050	0.45	-1.3
3,283,969	+		DZA65_RS15050	0.45	-2.2
3,283,970	-		DZA65_RS15050	0.45	-2.0
3,283,970	-		DZA65_RS15050	0.45	+0.8
3,283,971	+		DZA65_RS15050	0.45	+1.9
3,283,972	-		DZA65_RS15050	0.45	+0.1
3,283,972	-		DZA65_RS15050	0.45	+0.6
3,283,972	-		DZA65_RS15050	0.45	+0.6
3,284,019	+		DZA65_RS15050	0.49	+0.1
3,284,019	+		DZA65_RS15050	0.49	-0.8
3,284,019	+		DZA65_RS15050	0.49	+0.6
3,284,020	-		DZA65_RS15050	0.49	+0.4
3,284,020	-		DZA65_RS15050	0.49	+0.3
3,284,020	-		DZA65_RS15050	0.49	+0.7
3,284,020	-		DZA65_RS15050	0.49	+0.2
3,284,020	-		DZA65_RS15050	0.49	+0.6
3,284,020	-		DZA65_RS15050	0.49	-1.7
3,284,020	-		DZA65_RS15050	0.49	-2.7
3,284,020	-		DZA65_RS15050	0.49	-1.7
3,284,020	-		DZA65_RS15050	0.49	-0.0
3,284,020	-		DZA65_RS15050	0.49	+0.6
3,284,020	-		DZA65_RS15050	0.49	+0.8
3,284,031	+		DZA65_RS15050	0.50	-1.4
3,284,031	+				-0.4
3,284,031	+		DZA65_RS15050	0.50	-0.4
3,284,031	+		DZA65_RS15050	0.50	-1.0
3,284,031	+		DZA65_RS15050	0.50	-1.0
3,284,032	-		DZA65_RS15050	0.50	+0.1
3,284,032	-				+0.6
3,284,032	-		DZA65_RS15050	0.50	+0.6
3,284,032	-		DZA65_RS15050	0.50	-0.4
3,284,099	-		DZA65_RS15050	0.55	-0.4
3,284,099	-		DZA65_RS15050	0.55	-0.1
3,284,119	+		DZA65_RS15050	0.56	+0.9
3,284,131	+		DZA65_RS15050	0.57	-2.4
3,284,131	+		DZA65_RS15050	0.57	-0.4
3,284,131	+		DZA65_RS15050	0.57	-0.8
3,284,131	+		DZA65_RS15050	0.57	+0.3
3,284,131	+		DZA65_RS15050	0.57	+0.5
3,284,131	+		DZA65_RS15050	0.57	-0.5
3,284,131	+		DZA65_RS15050	0.57	+1.7
3,284,131	+		DZA65_RS15050	0.57	+0.6
3,284,131	+		DZA65_RS15050	0.57	+1.4
3,284,131	+		DZA65_RS15050	0.57	-0.2
3,284,131	+		DZA65_RS15050	0.57	-0.7
3,284,131	+		DZA65_RS15050	0.57	+0.4
3,284,132	-		DZA65_RS15050	0.57	-0.2
3,284,132	-		DZA65_RS15050	0.57	+0.1
3,284,132	-		DZA65_RS15050	0.57	-0.4
3,284,132	-		DZA65_RS15050	0.57	-0.7
3,284,180	+		DZA65_RS15050	0.61	+0.3
3,284,180	+		DZA65_RS15050	0.61	-0.0
3,284,180	+		DZA65_RS15050	0.61	-1.4
3,284,181	-		DZA65_RS15050	0.61	+0.4
3,284,181	-		DZA65_RS15050	0.61	+0.5
3,284,296	+		DZA65_RS15050	0.69	+0.6
3,284,296	+		DZA65_RS15050	0.69	+0.4
3,284,297	-		DZA65_RS15050	0.69	+0.3
3,284,388	+		DZA65_RS15050	0.76	+0.3
3,284,388	+		DZA65_RS15050	0.76	-1.7
3,284,389	-		DZA65_RS15050	0.76	-0.4
3,284,437	+		DZA65_RS15050	0.79	-1.4
3,284,437	+		DZA65_RS15050	0.79	-3.1
3,284,438	-		DZA65_RS15050	0.80	-1.6
3,284,438	-		DZA65_RS15050	0.80	+1.2
3,284,465	+		DZA65_RS15050	0.82	-0.0
3,284,465	+		DZA65_RS15050	0.82	+0.3
3,284,466	-		DZA65_RS15050	0.82	-2.6
3,284,466	-		DZA65_RS15050	0.82	-0.2
3,284,466	-		DZA65_RS15050	0.82	-1.0
3,284,466	-		DZA65_RS15050	0.82	+0.8
3,284,503	+		DZA65_RS15050	0.84	+0.7
3,284,503	+		DZA65_RS15050	0.84	-0.3
3,284,504	-		DZA65_RS15050	0.84	+0.6
3,284,526	+		DZA65_RS15050	0.86	+1.4
3,284,607	+				+0.4
3,284,607	+				+0.1
3,284,607	+				+0.2
3,284,607	+				-0.4
3,284,607	+				-1.2
3,284,607	+				-1.0
3,284,608	-				-0.4
3,284,608	-				+0.8
3,284,608	-				+1.9
3,284,608	-				-0.0
3,284,608	-				+1.1
3,284,608	-				-1.6
3,284,608	-				+0.9
3,284,608	-				-0.8
3,284,613	+				-0.1
3,284,614	-				+0.3
3,284,657	+				-0.2
3,284,658	-				-1.8
3,284,696	+				-0.7
3,284,696	+				-0.7
3,284,696	+				-1.4
3,284,697	-				+0.3
3,284,697	-				-1.4
3,284,697	-				+0.5
3,284,701	+				+1.0
3,284,701	+				+0.3
3,284,701	+				-0.0
3,284,701	+				+1.3
3,284,702	-				-1.7
3,284,702	-				+0.7
3,284,702	-				-0.0
3,284,702	-				-1.9
3,284,702	-				+0.6
3,284,702	-				-1.6
3,284,762	+				-0.6
3,284,762	+				+1.0
3,284,762	+				+0.7
3,284,821	+				+0.0
3,284,876	+				-0.2
3,284,877	-				+1.8
3,284,877	-				-0.2
3,284,886	+				-0.7
3,284,886	+				-1.4
3,284,887	-				-1.7
3,285,011	+		DZA65_RS15055	0.14	-2.7
3,285,011	+		DZA65_RS15055	0.14	-0.3
3,285,012	-		DZA65_RS15055	0.14	-0.3
3,285,012	-		DZA65_RS15055	0.14	-0.7
3,285,025	+		DZA65_RS15055	0.14	-1.0
3,285,025	+		DZA65_RS15055	0.14	-0.1
3,285,092	+		DZA65_RS15055	0.17	-0.7
3,285,092	+		DZA65_RS15055	0.17	-1.0
3,285,093	-		DZA65_RS15055	0.17	-1.2
3,285,093	-		DZA65_RS15055	0.17	+0.6
3,285,093	-		DZA65_RS15055	0.17	-1.7
3,285,093	-		DZA65_RS15055	0.17	+0.0
3,285,136	-		DZA65_RS15055	0.19	+2.2
3,285,142	+		DZA65_RS15055	0.20	+1.9
3,285,143	-		DZA65_RS15055	0.20	+0.6
3,285,143	-		DZA65_RS15055	0.20	+0.7
3,285,335	+		DZA65_RS15055	0.28	+0.7
3,285,335	+		DZA65_RS15055	0.28	-1.4
3,285,335	+		DZA65_RS15055	0.28	+0.4
3,285,336	-		DZA65_RS15055	0.29	-0.8
3,285,336	-		DZA65_RS15055	0.29	+0.3
3,285,343	+		DZA65_RS15055	0.29	+1.2
3,285,343	+		DZA65_RS15055	0.29	+0.9
3,285,343	+		DZA65_RS15055	0.29	-0.4
3,285,343	+		DZA65_RS15055	0.29	-2.2
3,285,343	+		DZA65_RS15055	0.29	+0.2
3,285,343	+		DZA65_RS15055	0.29	+1.0
3,285,343	+				+2.2
3,285,343	+		DZA65_RS15055	0.29	-1.0
3,285,344	-		DZA65_RS15055	0.29	+0.5
3,285,344	-		DZA65_RS15055	0.29	+0.6
3,285,417	+		DZA65_RS15055	0.32	+0.1
3,285,501	-		DZA65_RS15055	0.36	+0.0
3,285,501	-		DZA65_RS15055	0.36	+0.4
3,285,501	-		DZA65_RS15055	0.36	-0.8
3,285,513	+		DZA65_RS15055	0.37	-0.6
3,285,514	-		DZA65_RS15055	0.37	+0.7
3,285,540	-		DZA65_RS15055	0.38	+2.4
3,285,549	+		DZA65_RS15055	0.38	-0.4
3,285,597	+		DZA65_RS15055	0.41	-2.4
3,285,597	+		DZA65_RS15055	0.41	-1.7
3,285,597	+		DZA65_RS15055	0.41	+0.0
3,285,597	+		DZA65_RS15055	0.41	-1.0
3,285,598	-		DZA65_RS15055	0.41	+0.2
3,285,598	-		DZA65_RS15055	0.41	+0.1
3,285,598	-		DZA65_RS15055	0.41	-0.4
3,285,688	+		DZA65_RS15055	0.45	-1.2
3,285,688	+				+0.6
3,285,688	+		DZA65_RS15055	0.45	+0.9
3,285,688	+		DZA65_RS15055	0.45	+0.4
3,285,689	-		DZA65_RS15055	0.45	-2.4
3,285,689	-				+1.6
3,285,689	-		DZA65_RS15055	0.45	-1.0
3,285,698	+		DZA65_RS15055	0.45	+0.0
3,285,698	+		DZA65_RS15055	0.45	+0.5
3,285,699	-		DZA65_RS15055	0.45	+3.4
3,285,760	-		DZA65_RS15055	0.48	-1.8
3,285,760	-		DZA65_RS15055	0.48	-0.1
3,285,760	-		DZA65_RS15055	0.48	+0.2
3,285,783	+		DZA65_RS15055	0.49	+0.1
3,285,784	-		DZA65_RS15055	0.49	+0.2
3,285,883	-		DZA65_RS15055	0.54	+0.7
3,285,932	-		DZA65_RS15055	0.56	-0.1
3,285,958	+		DZA65_RS15055	0.57	-0.6
3,285,958	+		DZA65_RS15055	0.57	+0.9
3,285,958	+		DZA65_RS15055	0.57	+0.7
3,285,959	-		DZA65_RS15055	0.57	-0.8
3,285,959	-		DZA65_RS15055	0.57	-0.6
3,285,981	+		DZA65_RS15055	0.58	-0.7
3,285,981	+		DZA65_RS15055	0.58	+3.0
3,285,981	+		DZA65_RS15055	0.58	+1.6
3,285,982	-		DZA65_RS15055	0.58	+0.9
3,285,982	-		DZA65_RS15055	0.58	-1.0
3,285,985	+		DZA65_RS15055	0.58	+0.1
3,285,991	+		DZA65_RS15055	0.59	+0.0
3,285,991	+		DZA65_RS15055	0.59	-0.7
3,286,011	+		DZA65_RS15055	0.60	-1.4
3,286,011	+		DZA65_RS15055	0.60	+2.0
3,286,011	+		DZA65_RS15055	0.60	+0.4
3,286,011	+		DZA65_RS15055	0.60	-0.4
3,286,011	+		DZA65_RS15055	0.60	+0.0
3,286,011	+		DZA65_RS15055	0.60	+0.2
3,286,011	+		DZA65_RS15055	0.60	+1.1
3,286,012	-		DZA65_RS15055	0.60	-0.4
3,286,012	-		DZA65_RS15055	0.60	-0.2
3,286,012	-		DZA65_RS15055	0.60	-0.9
3,286,024	+		DZA65_RS15055	0.60	+1.8
3,286,025	-		DZA65_RS15055	0.60	+0.1
3,286,025	-		DZA65_RS15055	0.60	+1.7
3,286,056	+		DZA65_RS15055	0.62	+0.2
3,286,056	+		DZA65_RS15055	0.62	-2.0
3,286,057	-		DZA65_RS15055	0.62	-1.9
3,286,111	+		DZA65_RS15055	0.64	-0.1
3,286,156	-		DZA65_RS15055	0.66	+0.2
3,286,166	+		DZA65_RS15055	0.67	+0.9
3,286,167	-		DZA65_RS15055	0.67	+1.6
3,286,294	+		DZA65_RS15055	0.73	+0.4
3,286,323	+		DZA65_RS15055	0.74	-0.7
3,286,323	+		DZA65_RS15055	0.74	-2.2
3,286,323	+		DZA65_RS15055	0.74	+1.9
3,286,323	+		DZA65_RS15055	0.74	+0.9
3,286,324	-		DZA65_RS15055	0.74	+1.3
3,286,324	-		DZA65_RS15055	0.74	+2.3
3,286,324	-		DZA65_RS15055	0.74	+0.6
3,286,324	-		DZA65_RS15055	0.74	-2.0
3,286,356	+		DZA65_RS15055	0.75	+0.9
3,286,356	+		DZA65_RS15055	0.75	+0.3
3,286,379	+		DZA65_RS15055	0.76	+0.3
3,286,379	+				+1.6
3,286,379	+		DZA65_RS15055	0.76	-0.3
3,286,379	+		DZA65_RS15055	0.76	+0.1
3,286,379	+		DZA65_RS15055	0.76	-0.2
3,286,379	+				+0.6
3,286,379	+		DZA65_RS15055	0.76	+0.6
3,286,380	-		DZA65_RS15055	0.77	+0.1
3,286,380	-		DZA65_RS15055	0.77	+0.6
3,286,380	-		DZA65_RS15055	0.77	-0.7
3,286,385	+		DZA65_RS15055	0.77	+0.3
3,286,414	+		DZA65_RS15055	0.78	+0.4
3,286,414	+		DZA65_RS15055	0.78	+0.4
3,286,415	-		DZA65_RS15055	0.78	+0.8
3,286,415	-		DZA65_RS15055	0.78	-0.5
3,286,415	-				+1.0
3,286,415	-		DZA65_RS15055	0.78	-1.2
3,286,415	-		DZA65_RS15055	0.78	-0.9
3,286,431	+		DZA65_RS15055	0.79	+0.6
3,286,432	-		DZA65_RS15055	0.79	-1.0
3,286,491	+		DZA65_RS15055	0.82	-1.4
3,286,491	+		DZA65_RS15055	0.82	+0.8
3,286,491	+		DZA65_RS15055	0.82	-0.6
3,286,492	-		DZA65_RS15055	0.82	+0.2
3,286,492	-		DZA65_RS15055	0.82	-1.7
3,286,492	-		DZA65_RS15055	0.82	+1.2
3,286,492	-		DZA65_RS15055	0.82	-1.2
3,286,613	+		DZA65_RS15055	0.87	+1.1
3,286,613	+		DZA65_RS15055	0.87	+0.2
3,286,614	-		DZA65_RS15055	0.87	-1.0
3,286,614	-		DZA65_RS15055	0.87	+0.2
3,286,614	-		DZA65_RS15055	0.87	+0.9
3,286,633	+		DZA65_RS15055	0.88	-2.2
3,286,633	+		DZA65_RS15055	0.88	+0.3
3,286,645	+		DZA65_RS15055	0.89	+0.3
3,286,645	+		DZA65_RS15055	0.89	+2.2
3,286,645	+		DZA65_RS15055	0.89	+1.3
3,286,645	+		DZA65_RS15055	0.89	+1.0
3,286,646	-		DZA65_RS15055	0.89	+0.3
3,286,646	-		DZA65_RS15055	0.89	-0.0
3,286,646	-		DZA65_RS15055	0.89	-0.3
3,286,646	-		DZA65_RS15055	0.89	+0.1
3,286,711	+				-2.2
3,286,803	+				-0.6
3,286,803	+				+0.9
3,286,804	-				-1.6
3,286,894	+				-0.7
3,286,894	+				-0.5
3,286,894	+				-1.3
3,286,894	+				-1.0
3,286,894	+				-1.2
3,286,894	+				-0.4
3,286,894	+				-0.4
3,286,894	+				+0.3
3,286,894	+				+1.2
3,286,894	+				-0.0
3,286,895	-				+0.3
3,286,895	-				-2.2
3,286,895	-				+3.4
3,286,895	-				-0.2
3,286,895	-				-2.9
3,286,895	-				-0.1
3,286,931	+		DZA65_RS22945	0.27	+1.8
3,286,931	+		DZA65_RS22945	0.27	-0.2
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