Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15025

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
3,278,569	+				-1.0
3,278,570	-				-1.1
3,278,570	-				+1.0
3,278,570	-				-0.1
3,278,570	-				+2.3
3,278,571	+				-0.6
3,278,591	+		DZA65_RS15020	0.11	-2.4
3,278,592	-		DZA65_RS15020	0.11	+1.3
3,278,612	+		DZA65_RS15020	0.13	+1.6
3,278,613	-		DZA65_RS15020	0.13	-1.4
3,278,613	-		DZA65_RS15020	0.13	-1.6
3,278,712	+		DZA65_RS15020	0.22	-0.3
3,278,712	+		DZA65_RS15020	0.22	-0.7
3,278,712	+		DZA65_RS15020	0.22	+0.7
3,278,712	+		DZA65_RS15020	0.22	-1.0
3,278,712	+		DZA65_RS15020	0.22	+0.9
3,278,712	+		DZA65_RS15020	0.22	-0.4
3,278,712	+		DZA65_RS15020	0.22	-1.0
3,278,712	+		DZA65_RS15020	0.22	+0.4
3,278,713	-		DZA65_RS15020	0.22	+0.3
3,278,713	-		DZA65_RS15020	0.22	-0.2
3,278,713	-		DZA65_RS15020	0.22	-0.1
3,278,714	+		DZA65_RS15020	0.22	-0.4
3,278,714	+		DZA65_RS15020	0.22	-2.0
3,278,714	+		DZA65_RS15020	0.22	-0.6
3,278,714	+		DZA65_RS15020	0.22	-0.7
3,278,714	+		DZA65_RS15020	0.22	-1.3
3,278,714	+		DZA65_RS15020	0.22	+0.9
3,278,714	+		DZA65_RS15020	0.22	-0.2
3,278,715	-		DZA65_RS15020	0.22	-1.4
3,278,715	-		DZA65_RS15020	0.22	+1.2
3,278,715	-		DZA65_RS15020	0.22	-0.6
3,278,715	-		DZA65_RS15020	0.22	-0.1
3,278,715	-		DZA65_RS15020	0.22	+0.2
3,278,715	-		DZA65_RS15020	0.22	-3.1
3,278,716	+		DZA65_RS15020	0.22	-1.0
3,278,717	-		DZA65_RS15020	0.23	-1.7
3,278,717	-		DZA65_RS15020	0.23	-2.2
3,278,752	-		DZA65_RS15020	0.26	-0.1
3,278,753	+		DZA65_RS15020	0.26	-0.4
3,278,753	+		DZA65_RS15020	0.26	+0.5
3,278,753	+		DZA65_RS15020	0.26	-0.0
3,278,753	+		DZA65_RS15020	0.26	+0.3
3,278,753	+		DZA65_RS15020	0.26	-0.4
3,278,753	+		DZA65_RS15020	0.26	-2.5
3,278,753	+		DZA65_RS15020	0.26	-2.7
3,278,753	+		DZA65_RS15020	0.26	-2.4
3,278,754	-		DZA65_RS15020	0.26	-0.4
3,278,754	-		DZA65_RS15020	0.26	-0.5
3,278,754	-		DZA65_RS15020	0.26	-2.7
3,278,754	-		DZA65_RS15020	0.26	+1.3
3,278,757	+		DZA65_RS15020	0.26	-1.2
3,278,757	+		DZA65_RS15020	0.26	-0.9
3,278,757	+		DZA65_RS15020	0.26	-2.5
3,278,758	-		DZA65_RS15020	0.26	+0.0
3,278,758	-		DZA65_RS15020	0.26	+1.7
3,278,758	-		DZA65_RS15020	0.26	+1.2
3,278,758	-		DZA65_RS15020	0.26	-0.1
3,278,758	-		DZA65_RS15020	0.26	-0.1
3,278,758	-		DZA65_RS15020	0.26	-1.3
3,278,758	-		DZA65_RS15020	0.26	-1.0
3,278,802	+		DZA65_RS15020	0.30	-0.6
3,278,831	+		DZA65_RS15020	0.33	-1.6
3,278,832	-		DZA65_RS15020	0.33	-0.5
3,278,908	+		DZA65_RS15020	0.40	-0.9
3,278,908	+		DZA65_RS15020	0.40	-0.6
3,278,908	+		DZA65_RS15020	0.40	-0.4
3,278,908	+		DZA65_RS15020	0.40	-2.7
3,278,908	+		DZA65_RS15020	0.40	+0.3
3,278,908	+		DZA65_RS15020	0.40	-0.6
3,278,908	+		DZA65_RS15020	0.40	-0.2
3,278,909	-		DZA65_RS15020	0.40	+1.1
3,278,909	-		DZA65_RS15020	0.40	-0.9
3,278,909	-		DZA65_RS15020	0.40	+1.0
3,278,909	-		DZA65_RS15020	0.40	+1.0
3,278,909	-		DZA65_RS15020	0.40	-0.4
3,279,028	+		DZA65_RS15020	0.51	+0.7
3,279,028	+		DZA65_RS15020	0.51	+0.6
3,279,028	+		DZA65_RS15020	0.51	+1.7
3,279,028	+		DZA65_RS15020	0.51	+0.0
3,279,028	+		DZA65_RS15020	0.51	-0.7
3,279,028	+		DZA65_RS15020	0.51	-0.3
3,279,028	+		DZA65_RS15020	0.51	-0.3
3,279,028	+		DZA65_RS15020	0.51	-2.6
3,279,028	+		DZA65_RS15020	0.51	+0.0
3,279,028	+		DZA65_RS15020	0.51	+1.2
3,279,028	+		DZA65_RS15020	0.51	+0.3
3,279,029	-		DZA65_RS15020	0.51	-1.0
3,279,029	-		DZA65_RS15020	0.51	+0.3
3,279,029	-		DZA65_RS15020	0.51	+2.2
3,279,029	-		DZA65_RS15020	0.51	-0.4
3,279,029	-		DZA65_RS15020	0.51	+0.6
3,279,029	-		DZA65_RS15020	0.51	-0.0
3,279,030	+		DZA65_RS15020	0.51	-3.0
3,279,030	+		DZA65_RS15020	0.51	+0.9
3,279,030	+		DZA65_RS15020	0.51	-0.2
3,279,030	+		DZA65_RS15020	0.51	+1.4
3,279,031	-		DZA65_RS15020	0.51	-1.0
3,279,031	-		DZA65_RS15020	0.51	-0.2
3,279,031	-		DZA65_RS15020	0.51	-0.4
3,279,031	-		DZA65_RS15020	0.51	+0.8
3,279,031	-		DZA65_RS15020	0.51	-0.1
3,279,031	-		DZA65_RS15020	0.51	-2.2
3,279,031	-		DZA65_RS15020	0.51	+1.0
3,279,032	+		DZA65_RS15020	0.51	-0.2
3,279,032	+		DZA65_RS15020	0.51	-2.3
3,279,032	+		DZA65_RS15020	0.51	-0.4
3,279,032	+		DZA65_RS15020	0.51	+0.1
3,279,032	+		DZA65_RS15020	0.51	+0.5
3,279,032	+		DZA65_RS15020	0.51	+1.1
3,279,033	-		DZA65_RS15020	0.51	-0.4
3,279,033	-		DZA65_RS15020	0.51	+0.6
3,279,033	-				+1.6
3,279,033	-		DZA65_RS15020	0.51	-1.6
3,279,033	-		DZA65_RS15020	0.51	+2.2
3,279,033	-		DZA65_RS15020	0.51	+0.4
3,279,033	-		DZA65_RS15020	0.51	+1.9
3,279,033	-		DZA65_RS15020	0.51	-0.2
3,279,033	-		DZA65_RS15020	0.51	+0.4
3,279,033	-		DZA65_RS15020	0.51	-2.4
3,279,054	+		DZA65_RS15020	0.53	-1.7
3,279,076	+		DZA65_RS15020	0.55	-1.4
3,279,076	+		DZA65_RS15020	0.55	-0.4
3,279,076	+		DZA65_RS15020	0.55	-0.2
3,279,076	+		DZA65_RS15020	0.55	+1.6
3,279,077	-		DZA65_RS15020	0.55	+0.3
3,279,077	-		DZA65_RS15020	0.55	+0.6
3,279,080	+		DZA65_RS15020	0.55	+0.2
3,279,080	+		DZA65_RS15020	0.55	-1.4
3,279,080	+				-1.0
3,279,081	-		DZA65_RS15020	0.56	-3.1
3,279,081	-		DZA65_RS15020	0.56	+0.3
3,279,081	-		DZA65_RS15020	0.56	-0.2
3,279,113	+				-2.2
3,279,113	+		DZA65_RS15020	0.58	-0.8
3,279,113	+		DZA65_RS15020	0.58	+0.7
3,279,113	+		DZA65_RS15020	0.58	-0.4
3,279,114	-		DZA65_RS15020	0.59	-2.6
3,279,134	+		DZA65_RS15020	0.60	-2.4
3,279,134	+		DZA65_RS15020	0.60	+0.8
3,279,158	+		DZA65_RS15020	0.63	-0.2
3,279,158	+		DZA65_RS15020	0.63	+0.1
3,279,159	-		DZA65_RS15020	0.63	+1.3
3,279,159	-		DZA65_RS15020	0.63	+1.1
3,279,159	-		DZA65_RS15020	0.63	-1.6
3,279,159	-		DZA65_RS15020	0.63	-1.8
3,279,160	+		DZA65_RS15020	0.63	-1.7
3,279,160	+		DZA65_RS15020	0.63	-0.8
3,279,160	+		DZA65_RS15020	0.63	+1.1
3,279,160	+		DZA65_RS15020	0.63	+0.7
3,279,160	+		DZA65_RS15020	0.63	+1.2
3,279,160	+		DZA65_RS15020	0.63	-1.7
3,279,160	+		DZA65_RS15020	0.63	+0.2
3,279,160	+		DZA65_RS15020	0.63	-0.2
3,279,160	+		DZA65_RS15020	0.63	+0.9
3,279,160	+		DZA65_RS15020	0.63	+0.6
3,279,161	-		DZA65_RS15020	0.63	+0.9
3,279,161	-		DZA65_RS15020	0.63	-1.3
3,279,161	-		DZA65_RS15020	0.63	-0.2
3,279,161	-		DZA65_RS15020	0.63	+0.1
3,279,161	-		DZA65_RS15020	0.63	+1.6
3,279,161	-		DZA65_RS15020	0.63	-0.4
3,279,161	-		DZA65_RS15020	0.63	-1.4
3,279,161	-		DZA65_RS15020	0.63	-0.2
3,279,198	-		DZA65_RS15020	0.66	+0.2
3,279,246	+		DZA65_RS15020	0.71	-1.4
3,279,246	+		DZA65_RS15020	0.71	-1.0
3,279,247	-		DZA65_RS15020	0.71	-0.6
3,279,275	+		DZA65_RS15020	0.73	+1.4
3,279,276	-		DZA65_RS15020	0.73	+0.5
3,279,276	-		DZA65_RS15020	0.73	-0.7
3,279,276	-		DZA65_RS15020	0.73	+1.9
3,279,276	-		DZA65_RS15020	0.73	-0.4
3,279,276	-		DZA65_RS15020	0.73	-0.4
3,279,279	+		DZA65_RS15020	0.74	-0.4
3,279,279	+		DZA65_RS15020	0.74	-1.7
3,279,280	-		DZA65_RS15020	0.74	+0.6
3,279,280	-		DZA65_RS15020	0.74	-0.4
3,279,318	+		DZA65_RS15020	0.77	+0.4
3,279,318	+		DZA65_RS15020	0.77	+0.8
3,279,318	+		DZA65_RS15020	0.77	-1.4
3,279,374	+		DZA65_RS15020	0.82	+1.6
3,279,375	-				-1.0
3,279,421	-		DZA65_RS15020	0.86	+1.0
3,279,421	-		DZA65_RS15020	0.86	+0.3
3,279,421	-		DZA65_RS15020	0.86	+0.5
3,279,422	+		DZA65_RS15020	0.87	+1.8
3,279,422	+		DZA65_RS15020	0.87	+0.9
3,279,422	+		DZA65_RS15020	0.87	+0.8
3,279,422	+		DZA65_RS15020	0.87	+0.9
3,279,422	+		DZA65_RS15020	0.87	+1.0
3,279,422	+		DZA65_RS15020	0.87	+1.0
3,279,423	-		DZA65_RS15020	0.87	-0.6
3,279,423	-		DZA65_RS15020	0.87	-0.7
3,279,423	-		DZA65_RS15020	0.87	+0.7
3,279,423	-		DZA65_RS15020	0.87	+1.9
3,279,423	-		DZA65_RS15020	0.87	+1.9
3,279,423	-		DZA65_RS15020	0.87	+0.9
3,279,458	+		DZA65_RS15020	0.90	-1.4
3,279,459	-		DZA65_RS15020	0.90	+1.2
3,279,459	-		DZA65_RS15020	0.90	+3.2
3,279,459	-		DZA65_RS15020	0.90	-0.7
3,279,459	-				-1.0
3,279,459	-		DZA65_RS15020	0.90	+1.8
3,279,461	+				-0.7
3,279,461	+				+1.0
3,279,461	+				-0.4
3,279,461	+				+1.3
3,279,461	+				-1.2
3,279,461	+				-0.2
3,279,462	-				-0.4
3,279,462	-				+0.3
3,279,469	+				-2.4
3,279,469	+				+0.5
3,279,469	+				-0.7
3,279,469	+				-0.6
3,279,470	-				-0.4
3,279,520	+				-0.9
3,279,521	-				+1.0
3,279,521	-				-0.3
3,279,558	+				-2.1
3,279,558	+				-0.2
3,279,580	+				-0.4
3,279,580	+				+0.4
3,279,580	+				+0.1
3,279,580	+				-1.2
3,279,581	-				+0.3
3,279,581	-				-0.4
3,279,581	-				+0.2
3,279,582	+				-1.4
3,279,582	+				+0.9
3,279,583	-				+2.3
3,279,583	-				+0.1
3,279,583	-				+1.3
3,279,583	-				-3.4
3,279,586	+				-2.0
3,279,696	+		DZA65_RS15025	0.23	-1.4
3,279,696	+		DZA65_RS15025	0.23	-0.7
3,279,856	-		DZA65_RS15025	0.51	+0.7
3,279,866	+		DZA65_RS15025	0.53	+0.7
3,279,867	-		DZA65_RS15025	0.53	+2.4
3,279,891	-		DZA65_RS15025	0.57	-0.4
3,279,891	-		DZA65_RS15025	0.57	-1.2
3,279,918	+		DZA65_RS15025	0.62	-0.1
3,279,918	+		DZA65_RS15025	0.62	+0.4
3,279,919	-		DZA65_RS15025	0.62	+0.8
3,280,004	+		DZA65_RS15025	0.77	-0.0
3,280,059	-		DZA65_RS15025	0.87	+1.1
3,280,059	-		DZA65_RS15025	0.87	+0.6
3,280,071	-		DZA65_RS15025	0.89	+0.8
3,280,091	-				-2.6
3,280,092	+				-0.5
3,280,107	-				+1.9
3,280,112	+				-0.1
3,280,133	-				-1.4
3,280,133	-				-0.6
3,280,182	+				+0.7
3,280,182	+				-0.8
3,280,182	+				-0.0
3,280,182	+				-0.8
3,280,183	-				+1.2
3,280,183	-				-1.2
3,280,183	-				-2.3
3,280,183	-				+0.6
3,280,183	-				+0.8
3,280,186	+				+0.3
3,280,187	-				-1.0
3,280,201	-				-1.0
3,280,201	-				-0.7
3,280,219	+				-0.3
3,280,219	+				-0.7
3,280,220	-				+0.6
3,280,221	+				+0.9
3,280,253	-		DZA65_RS15030	0.12	-1.7
3,280,278	+		DZA65_RS15030	0.14	+0.6
3,280,311	-		DZA65_RS15030	0.17	-1.4
3,280,311	-		DZA65_RS15030	0.17	-1.0
3,280,332	+		DZA65_RS15030	0.19	-2.4
3,280,386	+		DZA65_RS15030	0.24	+1.2
3,280,386	+		DZA65_RS15030	0.24	-2.7
3,280,387	-		DZA65_RS15030	0.24	-2.7
3,280,387	-		DZA65_RS15030	0.24	-0.3
3,280,412	-				+0.6
3,280,414	+		DZA65_RS15030	0.27	-2.2
3,280,414	+		DZA65_RS15030	0.27	-0.2
3,280,414	+		DZA65_RS15030	0.27	-0.6
3,280,415	-		DZA65_RS15030	0.27	-0.0
3,280,415	-		DZA65_RS15030	0.27	-0.0
3,280,415	-		DZA65_RS15030	0.27	-0.3
3,280,444	+		DZA65_RS15030	0.30	+0.8
3,280,444	+		DZA65_RS15030	0.30	+1.7
3,280,444	+		DZA65_RS15030	0.30	+0.6
3,280,445	-		DZA65_RS15030	0.30	-1.2
3,280,445	-		DZA65_RS15030	0.30	+0.4
3,280,445	-		DZA65_RS15030	0.30	-0.2
3,280,445	-		DZA65_RS15030	0.30	-0.3
3,280,445	-		DZA65_RS15030	0.30	+0.7
3,280,445	-		DZA65_RS15030	0.30	+1.3
3,280,445	-		DZA65_RS15030	0.30	+0.9
3,280,456	-		DZA65_RS15030	0.31	+0.8
3,280,457	+		DZA65_RS15030	0.31	+1.1
3,280,457	+		DZA65_RS15030	0.31	+0.5
3,280,457	+		DZA65_RS15030	0.31	+1.5
3,280,457	+		DZA65_RS15030	0.31	+1.0
3,280,458	-		DZA65_RS15030	0.31	+0.4
3,280,458	-		DZA65_RS15030	0.31	-1.7
3,280,458	-		DZA65_RS15030	0.31	+1.8
3,280,458	-		DZA65_RS15030	0.31	+1.0
3,280,458	-		DZA65_RS15030	0.31	+0.3
3,280,458	-		DZA65_RS15030	0.31	+0.4
3,280,458	-		DZA65_RS15030	0.31	-1.2
3,280,458	-		DZA65_RS15030	0.31	-0.0
3,280,458	-		DZA65_RS15030	0.31	-1.4
3,280,458	-		DZA65_RS15030	0.31	+0.9
3,280,476	+		DZA65_RS15030	0.33	+0.8
3,280,476	+		DZA65_RS15030	0.33	-0.6
3,280,509	+		DZA65_RS15030	0.36	-3.0
3,280,509	+		DZA65_RS15030	0.36	-0.2
3,280,509	+		DZA65_RS15030	0.36	+0.6
3,280,509	+		DZA65_RS15030	0.36	+0.7
3,280,510	-		DZA65_RS15030	0.36	+0.3
3,280,510	-		DZA65_RS15030	0.36	+0.4
3,280,510	-		DZA65_RS15030	0.36	-0.7
3,280,510	-		DZA65_RS15030	0.36	+0.3
3,280,556	+		DZA65_RS15030	0.40	-0.7
3,280,556	+		DZA65_RS15030	0.40	+1.2
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3,280,557	-		DZA65_RS15030	0.40	-1.0
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3,280,605	-		DZA65_RS15030	0.45	-2.0
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3,280,741	-		DZA65_RS15030	0.58	+1.2
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3,280,753	-		DZA65_RS15030	0.59	+0.3
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3,281,048	-		DZA65_RS15030	0.87	-0.3
3,281,048	-		DZA65_RS15030	0.87	-1.4
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3,281,048	-		DZA65_RS15030	0.87	-1.7
3,281,048	-		DZA65_RS15030	0.87	+1.2
3,281,048	-		DZA65_RS15030	0.87	+0.6
3,281,048	-		DZA65_RS15030	0.87	-2.9
3,281,048	-		DZA65_RS15030	0.87	+0.6
3,281,048	-		DZA65_RS15030	0.87	+1.6
3,281,048	-		DZA65_RS15030	0.87	+0.3
3,281,048	-		DZA65_RS15030	0.87	-0.2
3,281,057	-		DZA65_RS15030	0.87	-1.1
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3,281,058	+		DZA65_RS15030	0.87	-1.0
3,281,059	-		DZA65_RS15030	0.88	-1.7
3,281,087	+				+0.6
3,281,088	-				-0.8
3,281,088	-				-1.0
3,281,088	-				+0.4