Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13895

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
2,984,325	+		DZA65_RS13885	0.58	-1.8
2,984,325	+		DZA65_RS13885	0.58	-0.4
2,984,325	+		DZA65_RS13885	0.58	-1.8
2,984,325	+		DZA65_RS13885	0.58	-2.8
2,984,326	-		DZA65_RS13885	0.58	-0.6
2,984,326	-		DZA65_RS13885	0.58	+0.5
2,984,326	-		DZA65_RS13885	0.58	-1.1
2,984,326	-		DZA65_RS13885	0.58	-3.0
2,984,429	+		DZA65_RS13885	0.87	-1.1
2,984,429	+		DZA65_RS13885	0.87	-1.6
2,984,429	+		DZA65_RS13885	0.87	-0.6
2,984,429	+		DZA65_RS13885	0.87	-0.3
2,984,429	+		DZA65_RS13885	0.87	+0.0
2,984,430	-		DZA65_RS13885	0.87	-1.5
2,984,430	-		DZA65_RS13885	0.87	-0.2
2,984,430	-		DZA65_RS13885	0.87	-0.2
2,984,430	-		DZA65_RS13885	0.87	-0.2
2,984,430	-		DZA65_RS13885	0.87	-0.5
2,984,430	-		DZA65_RS13885	0.87	+2.7
2,984,430	-		DZA65_RS13885	0.87	-2.3
2,984,449	+				-1.3
2,984,450	-				+1.5
2,984,450	-				+0.5
2,984,451	+				+0.2
2,984,451	+				-2.2
2,984,452	-				-1.5
2,984,452	-				+1.1
2,984,452	-				+0.5
2,984,452	-				-1.0
2,984,494	+				+0.5
2,984,494	+				-0.1
2,984,495	-				-0.7
2,984,539	+				+0.4
2,984,539	+				-0.6
2,984,539	+				-1.8
2,984,539	+				-1.5
2,984,539	+				-1.3
2,984,539	+				-2.2
2,984,539	+				+0.5
2,984,539	+				+0.1
2,984,539	+				-0.2
2,984,539	+				+0.4
2,984,539	+				+0.1
2,984,539	+				+0.7
2,984,539	+				+0.8
2,984,539	+				+0.9
2,984,539	+				-0.1
2,984,540	-				-2.3
2,984,540	-				+1.5
2,984,540	-				+0.2
2,984,540	-				+0.4
2,984,540	-				+0.5
2,984,540	-				-0.6
2,984,541	+				+0.5
2,984,541	+				-2.3
2,984,541	+				-1.1
2,984,541	+				+0.3
2,984,541	+				-1.9
2,984,541	+				+0.4
2,984,541	+				-0.8
2,984,541	+				-0.1
2,984,542	-				+0.1
2,984,542	-				+0.3
2,984,542	-				-1.3
2,984,542	-				+0.4
2,984,542	-				-0.5
2,984,542	-				+0.7
2,984,542	-				-1.5
2,984,542	-				+1.0
2,984,542	-				-0.7
2,984,542	-				-0.5
2,984,542	-				-1.8
2,984,542	-				+0.1
2,984,542	-				+1.3
2,984,542	-				-0.5
2,984,542	-				+0.5
2,984,542	-				-1.1
2,984,542	-				-0.5
2,984,542	-				+0.9
2,984,542	-				-1.0
2,984,543	+				-0.5
2,984,543	+				+3.0
2,984,543	+				-0.9
2,984,543	+				+0.0
2,984,543	+				-0.2
2,984,543	+				-0.7
2,984,543	+				-0.5
2,984,543	+				-0.6
2,984,544	-				+1.0
2,984,544	-				+1.5
2,984,544	-				+1.0
2,984,544	-				+0.4
2,984,544	-				-1.8
2,984,544	-				+0.1
2,984,544	-				+0.4
2,984,544	-				-0.2
2,984,544	-				+0.3
2,984,544	-				-0.3
2,984,544	-				+1.2
2,984,544	-				-0.3
2,984,544	-				-0.1
2,984,544	-				+1.4
2,984,544	-				-0.1
2,984,544	-				+0.5
2,984,575	-				-0.1
2,984,605	+				+1.5
2,984,605	+				-0.9
2,984,606	-				+0.7
2,984,616	+				-0.3
2,984,616	+				+2.1
2,984,617	-				+0.3
2,984,617	-				-1.1
2,984,668	+				-0.7
2,984,668	+				+0.5
2,984,668	+				-1.2
2,984,668	+				-2.3
2,984,668	+				-0.2
2,984,668	+				+3.5
2,984,668	+				-0.2
2,984,669	-				+0.5
2,984,670	+				-1.5
2,984,670	+				-1.2
2,984,670	+				+0.4
2,984,670	+				+0.5
2,984,671	-				+0.5
2,984,671	-				-0.1
2,984,678	+				-0.6
2,984,678	+				+0.2
2,984,678	+				-1.8
2,984,678	+				-0.4
2,984,679	-				-1.8
2,984,679	-				-1.1
2,984,679	-				+0.2
2,984,679	-				-1.5
2,984,711	+		DZA65_RS13890	0.14	+0.0
2,984,711	+		DZA65_RS13890	0.14	+0.8
2,984,711	+		DZA65_RS13890	0.14	-3.3
2,984,711	+		DZA65_RS13890	0.14	+0.1
2,984,744	+		DZA65_RS13890	0.24	-1.8
2,984,744	+		DZA65_RS13890	0.24	+0.8
2,984,744	+		DZA65_RS13890	0.24	-3.6
2,984,744	+		DZA65_RS13890	0.24	-1.1
2,984,744	+		DZA65_RS13890	0.24	-2.1
2,984,744	+		DZA65_RS13890	0.24	+0.5
2,984,804	+		DZA65_RS13890	0.43	-1.9
2,984,804	+		DZA65_RS13890	0.43	+2.1
2,984,804	+		DZA65_RS13890	0.43	-0.8
2,984,804	+		DZA65_RS13890	0.43	-0.3
2,984,805	-		DZA65_RS13890	0.44	-0.2
2,984,805	-		DZA65_RS13890	0.44	+0.5
2,984,805	-		DZA65_RS13890	0.44	-1.9
2,984,805	-		DZA65_RS13890	0.44	-0.5
2,984,956	-				+0.8
2,984,975	+				-0.3
2,984,975	+				-0.5
2,984,976	-				-3.6
2,984,976	-				-1.1
2,984,976	-				-1.9
2,985,027	-				-0.6
2,985,034	-				+2.9
2,985,039	+				-1.3
2,985,039	+				-3.4
2,985,039	+				+3.0
2,985,039	+				-1.3
2,985,039	+				-1.2
2,985,039	+				-1.8
2,985,040	-				-0.5
2,985,043	+				-0.5
2,985,043	+				-0.5
2,985,043	+				-2.1
2,985,043	+				-1.0
2,985,043	+				+1.5
2,985,043	+				-1.3
2,985,044	-				-0.6
2,985,079	+				-2.0
2,985,088	+				-2.1
2,985,088	+				+1.1
2,985,088	+				+1.5
2,985,088	+				-0.2
2,985,088	+				-2.1
2,985,088	+				-2.5
2,985,088	+				-1.2
2,985,088	+				-0.6
2,985,088	+				-1.9
2,985,089	-				+0.6
2,985,089	-				-0.6
2,985,089	-				+0.5
2,985,089	-				+0.5
2,985,089	-				+0.5
2,985,089	-				+1.0
2,985,089	-				-0.8
2,985,089	-				-0.8
2,985,131	-				-0.8
2,985,133	+				+0.0
2,985,133	+				+0.1
2,985,133	+				+0.6
2,985,133	+				-1.5
2,985,133	+				-1.5
2,985,141	-				-2.1
2,985,143	-				-1.2
2,985,153	-				-2.1
2,985,153	-				-2.9
2,985,198	+				+1.8
2,985,199	-				-2.6
2,985,199	-				+1.3
2,985,212	+				-1.1
2,985,218	+				-0.1
2,985,266	-				-1.5
2,985,266	-				-1.6
2,985,266	-				+0.3
2,985,266	-				-1.1
2,985,270	+				+0.4
2,985,270	+				+1.4
2,985,270	+				-0.6
2,985,270	+				-0.2
2,985,270	+				-0.7
2,985,308	+				-0.5
2,985,308	+				-1.6
2,985,308	+				-0.7
2,985,309	-				-1.2
2,985,309	-				-0.3
2,985,309	-				+0.1
2,985,309	-				-1.8
2,985,309	-				-1.0
2,985,309	-				-1.3
2,985,309	-				-0.3
2,985,309	-				-0.7
2,985,313	+				-0.8
2,985,313	+				-1.5
2,985,313	+				-0.5
2,985,313	+				-0.2
2,985,313	+				-0.2
2,985,313	+				-0.8
2,985,313	+				-1.5
2,985,314	-				-1.8
2,985,314	-				+0.3
2,985,314	-				-1.1
2,985,324	+				-2.1
2,985,324	+				-1.0
2,985,324	+				-1.1
2,985,325	-				-0.3
2,985,325	-				-0.0
2,985,366	+				-2.6
2,985,367	-				-0.3
2,985,367	-				+0.1
2,985,367	-				-2.8
2,985,391	+				+0.5
2,985,391	+				-0.6
2,985,391	+				-0.2
2,985,392	-				-0.1
2,985,392	-				+0.1
2,985,403	-				+0.0
2,985,424	+				+0.5
2,985,424	+				-2.1
2,985,424	+				-0.1
2,985,425	-				+0.3
2,985,425	-				-0.6
2,985,425	-				-0.5
2,985,437	-				+0.1
2,985,482	+				-0.9
2,985,482	+				-0.1
2,985,482	+				-2.9
2,985,482	+				-0.5
2,985,482	+				-0.7
2,985,482	+				+0.0
2,985,482	+				-2.1
2,985,483	-				-1.1
2,985,483	-				+0.2
2,985,483	-				-0.7
2,985,483	-				+0.8
2,985,483	-				-0.6
2,985,483	-				-2.1
2,985,483	-				-0.1
2,985,483	-				-0.5
2,985,490	+		DZA65_RS13895	0.10	+0.7
2,985,490	+		DZA65_RS13895	0.10	-1.6
2,985,491	-		DZA65_RS13895	0.10	-0.5
2,985,491	-		DZA65_RS13895	0.10	+0.0
2,985,511	+		DZA65_RS13895	0.11	-1.3
2,985,512	-				-1.5
2,985,514	+		DZA65_RS13895	0.12	-1.7
2,985,514	+		DZA65_RS13895	0.12	-2.3
2,985,514	+		DZA65_RS13895	0.12	-1.7
2,985,514	+		DZA65_RS13895	0.12	-0.3
2,985,514	+		DZA65_RS13895	0.12	-1.3
2,985,514	+		DZA65_RS13895	0.12	-2.3
2,985,514	+		DZA65_RS13895	0.12	-0.4
2,985,514	+		DZA65_RS13895	0.12	+0.0
2,985,515	-		DZA65_RS13895	0.12	+0.3
2,985,515	-		DZA65_RS13895	0.12	+0.0
2,985,515	-		DZA65_RS13895	0.12	-1.1
2,985,515	-		DZA65_RS13895	0.12	-2.5
2,985,515	-		DZA65_RS13895	0.12	-0.5
2,985,515	-		DZA65_RS13895	0.12	+0.4
2,985,515	-		DZA65_RS13895	0.12	+1.1
2,985,515	-		DZA65_RS13895	0.12	+0.3
2,985,515	-		DZA65_RS13895	0.12	-2.1
2,985,515	-		DZA65_RS13895	0.12	-0.8
2,985,600	-		DZA65_RS13895	0.17	-1.3
2,985,600	-		DZA65_RS13895	0.17	+0.9
2,985,713	+		DZA65_RS13895	0.23	+0.5
2,985,713	+		DZA65_RS13895	0.23	-1.5
2,985,713	+		DZA65_RS13895	0.23	+1.1
2,985,713	+		DZA65_RS13895	0.23	-0.3
2,985,713	+		DZA65_RS13895	0.23	-0.3
2,985,713	+		DZA65_RS13895	0.23	-0.3
2,985,713	+		DZA65_RS13895	0.23	+0.4
2,985,713	+		DZA65_RS13895	0.23	-1.9
2,985,714	-		DZA65_RS13895	0.23	-1.1
2,985,714	-		DZA65_RS13895	0.23	-0.6
2,985,714	-		DZA65_RS13895	0.23	-0.2
2,985,714	-		DZA65_RS13895	0.23	+1.3
2,985,714	-		DZA65_RS13895	0.23	-0.5
2,985,738	+		DZA65_RS13895	0.25	-1.8
2,985,739	-		DZA65_RS13895	0.25	-0.9
2,985,772	+		DZA65_RS13895	0.27	-1.6
2,985,772	+		DZA65_RS13895	0.27	-1.1
2,985,773	-		DZA65_RS13895	0.27	-2.3
2,985,783	+		DZA65_RS13895	0.27	-0.8
2,985,783	+		DZA65_RS13895	0.27	-3.3
2,985,783	+		DZA65_RS13895	0.27	+2.6
2,985,783	+		DZA65_RS13895	0.27	-0.6
2,985,783	+		DZA65_RS13895	0.27	-1.7
2,985,784	-		DZA65_RS13895	0.27	+0.8
2,985,784	-		DZA65_RS13895	0.27	-0.5
2,985,784	-		DZA65_RS13895	0.27	-1.1
2,985,784	-		DZA65_RS13895	0.27	-1.1
2,985,784	-		DZA65_RS13895	0.27	+0.7
2,985,784	-		DZA65_RS13895	0.27	-0.4
2,985,789	+		DZA65_RS13895	0.28	-0.8
2,985,789	+		DZA65_RS13895	0.28	-1.5
2,985,789	+		DZA65_RS13895	0.28	+0.1
2,985,790	-		DZA65_RS13895	0.28	-0.8
2,985,790	-		DZA65_RS13895	0.28	+0.5
2,985,901	+		DZA65_RS13895	0.34	-0.9
2,985,901	+		DZA65_RS13895	0.34	-0.9
2,985,901	+		DZA65_RS13895	0.34	-0.9
2,985,901	+		DZA65_RS13895	0.34	-1.8
2,985,901	+		DZA65_RS13895	0.34	+0.4
2,985,901	+		DZA65_RS13895	0.34	-1.8
2,985,901	+		DZA65_RS13895	0.34	+0.0
2,985,902	-		DZA65_RS13895	0.34	-0.5
2,985,902	-		DZA65_RS13895	0.34	+0.4
2,985,905	+		DZA65_RS13895	0.34	-0.2
2,985,905	+		DZA65_RS13895	0.34	-2.8
2,985,905	+		DZA65_RS13895	0.34	-0.5
2,985,905	+		DZA65_RS13895	0.34	+0.2
2,985,905	+		DZA65_RS13895	0.34	-1.8
2,985,905	+		DZA65_RS13895	0.34	-0.2
2,985,906	-		DZA65_RS13895	0.34	-1.3
2,985,906	-		DZA65_RS13895	0.34	-0.1
2,985,949	+		DZA65_RS13895	0.37	-1.6
2,985,971	-		DZA65_RS13895	0.38	-1.0
2,986,028	+		DZA65_RS13895	0.41	-0.3
2,986,028	+		DZA65_RS13895	0.41	-0.8
2,986,028	+		DZA65_RS13895	0.41	-2.3
2,986,028	+		DZA65_RS13895	0.41	-0.7
2,986,028	+		DZA65_RS13895	0.41	+1.0
2,986,028	+		DZA65_RS13895	0.41	+0.3
2,986,029	-		DZA65_RS13895	0.42	-1.1
2,986,029	-		DZA65_RS13895	0.42	-1.2
2,986,029	-		DZA65_RS13895	0.42	-0.8
2,986,029	-		DZA65_RS13895	0.42	-1.9
2,986,052	+		DZA65_RS13895	0.43	-0.2
2,986,052	+		DZA65_RS13895	0.43	-0.9
2,986,052	+		DZA65_RS13895	0.43	+0.1
2,986,053	-		DZA65_RS13895	0.43	-2.3
2,986,053	-		DZA65_RS13895	0.43	-1.5
2,986,053	-		DZA65_RS13895	0.43	-2.5
2,986,086	+		DZA65_RS13895	0.45	-2.8
2,986,086	+		DZA65_RS13895	0.45	-1.1
2,986,086	+		DZA65_RS13895	0.45	-1.6
2,986,087	-		DZA65_RS13895	0.45	-2.3
2,986,171	+		DZA65_RS13895	0.50	+0.2
2,986,172	-		DZA65_RS13895	0.50	+0.3
2,986,172	-		DZA65_RS13895	0.50	-2.3
2,986,245	+		DZA65_RS13895	0.54	-0.1
2,986,245	+		DZA65_RS13895	0.54	-1.3
2,986,245	+		DZA65_RS13895	0.54	-0.0
2,986,245	+		DZA65_RS13895	0.54	-1.8
2,986,245	+		DZA65_RS13895	0.54	-0.1
2,986,245	+		DZA65_RS13895	0.54	-1.5
2,986,245	+		DZA65_RS13895	0.54	+0.5
2,986,245	+		DZA65_RS13895	0.54	+2.1
2,986,246	-		DZA65_RS13895	0.54	-1.1
2,986,246	-		DZA65_RS13895	0.54	+1.4
2,986,246	-		DZA65_RS13895	0.54	+0.7
2,986,246	-		DZA65_RS13895	0.54	+1.7
2,986,246	-		DZA65_RS13895	0.54	+0.9
2,986,246	-		DZA65_RS13895	0.54	+0.7
2,986,246	-				-1.5
2,986,246	-		DZA65_RS13895	0.54	-2.1
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2,986,273	+		DZA65_RS13895	0.56	-1.6
2,986,274	-		DZA65_RS13895	0.56	-0.9
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2,986,300	+				-1.1
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2,986,301	-		DZA65_RS13895	0.57	+1.9
2,986,301	-		DZA65_RS13895	0.57	-1.1
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2,986,330	+		DZA65_RS13895	0.59	-2.3
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2,986,385	-		DZA65_RS13895	0.62	+2.1
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2,986,385	-		DZA65_RS13895	0.62	-1.1
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2,986,424	+		DZA65_RS13895	0.64	-1.2
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2,986,424	+		DZA65_RS13895	0.64	-1.9
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2,986,425	-		DZA65_RS13895	0.65	-1.3
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2,986,425	-		DZA65_RS13895	0.65	-2.1
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2,986,425	-		DZA65_RS13895	0.65	-1.5
2,986,425	-		DZA65_RS13895	0.65	-1.1
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2,986,425	-		DZA65_RS13895	0.65	+0.4
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2,986,447	+		DZA65_RS13895	0.66	-0.1
2,986,447	+		DZA65_RS13895	0.66	-1.1
2,986,447	+		DZA65_RS13895	0.66	+1.8
2,986,448	-		DZA65_RS13895	0.66	+0.2
2,986,448	-		DZA65_RS13895	0.66	-2.1
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2,986,454	+		DZA65_RS13895	0.66	-0.1
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2,986,454	+		DZA65_RS13895	0.66	+0.4
2,986,454	+		DZA65_RS13895	0.66	-2.2
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2,986,455	-		DZA65_RS13895	0.66	+1.1
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2,986,455	-		DZA65_RS13895	0.66	+1.8
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2,986,502	-		DZA65_RS13895	0.69	-1.7
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2,986,502	-		DZA65_RS13895	0.69	+0.1
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2,986,532	-		DZA65_RS13895	0.71	-2.1
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2,986,535	+		DZA65_RS13895	0.71	+1.5
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2,986,535	+		DZA65_RS13895	0.71	-0.1
2,986,535	+		DZA65_RS13895	0.71	-1.5
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2,986,536	-		DZA65_RS13895	0.71	-1.3
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2,986,536	-		DZA65_RS13895	0.71	-2.0
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2,986,660	+		DZA65_RS13895	0.78	-1.1
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2,986,661	-		DZA65_RS13895	0.78	+1.1
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2,986,790	-		DZA65_RS13895	0.86	-0.1
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2,986,897	+				-1.5
2,986,898	-				-2.6
2,986,898	-				+1.2
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2,986,898	-				-0.6
2,986,898	-				-0.3
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2,986,911	+				-1.6
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2,986,911	+				-1.5
2,986,911	+				-3.6
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2,987,031	+				+2.5
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2,987,032	-				-1.7
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2,987,919	+		DZA65_RS13900	0.89	-1.3
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2,987,920	-		DZA65_RS13900	0.89	-1.8
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2,987,920	-		DZA65_RS13900	0.89	-2.1
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2,987,920	-		DZA65_RS13900	0.89	-1.7
2,987,920	-		DZA65_RS13900	0.89	-1.1
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2,987,963	+				+1.1
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2,987,964	-				+2.1
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