Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13405

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
2,871,987	+				+0.5
2,871,987	+				-2.7
2,871,987	+				+0.5
2,871,987	+				+0.7
2,871,987	+				+1.1
2,871,987	+				+0.1
2,871,987	+				+0.7
2,871,987	+				+0.8
2,871,987	+				-0.5
2,871,987	+				-0.5
2,871,987	+				+1.0
2,871,987	+				-0.1
2,871,987	+				-1.5
2,871,987	+				-1.5
2,871,988	-				-1.5
2,871,988	-				-1.1
2,871,988	-				-0.3
2,871,988	-				-0.8
2,871,988	-				+0.6
2,871,988	-				+1.2
2,871,988	-				+0.4
2,871,988	-				-0.1
2,871,988	-				+0.5
2,871,988	-				+0.3
2,871,988	-				+1.0
2,872,002	+				+1.9
2,872,022	+				+1.0
2,872,022	+				+0.1
2,872,022	+				-0.2
2,872,022	+				-1.3
2,872,023	-				-0.5
2,872,023	-				+0.5
2,872,023	-				+0.6
2,872,023	-				-0.3
2,872,023	-				+0.7
2,872,023	-				-1.8
2,872,023	-				+0.5
2,872,023	-				-1.1
2,872,023	-				+0.9
2,872,023	-				-0.3
2,872,297	+		DZA65_RS13400	0.32	+2.8
2,872,297	+		DZA65_RS13400	0.32	-0.7
2,872,297	+		DZA65_RS13400	0.32	-1.1
2,872,297	+		DZA65_RS13400	0.32	-0.9
2,872,297	+		DZA65_RS13400	0.32	+1.4
2,872,297	+		DZA65_RS13400	0.32	-1.5
2,872,297	+		DZA65_RS13400	0.32	-0.4
2,872,298	-		DZA65_RS13400	0.32	+0.3
2,872,298	-		DZA65_RS13400	0.32	+0.1
2,872,298	-		DZA65_RS13400	0.32	-2.7
2,872,298	-		DZA65_RS13400	0.32	-0.8
2,872,298	-		DZA65_RS13400	0.32	+0.9
2,872,298	-		DZA65_RS13400	0.32	-0.1
2,872,300	-		DZA65_RS13400	0.33	+0.5
2,872,323	+		DZA65_RS13400	0.35	-1.8
2,872,323	+		DZA65_RS13400	0.35	-2.5
2,872,323	+		DZA65_RS13400	0.35	-2.4
2,872,484	-		DZA65_RS13400	0.52	+0.6
2,872,542	+		DZA65_RS13400	0.58	-2.1
2,872,542	+		DZA65_RS13400	0.58	+1.3
2,872,543	-		DZA65_RS13400	0.58	+0.5
2,872,543	-		DZA65_RS13400	0.58	+0.8
2,872,543	-		DZA65_RS13400	0.58	-1.4
2,872,555	+		DZA65_RS13400	0.59	+0.2
2,872,556	-		DZA65_RS13400	0.59	+1.0
2,872,558	+		DZA65_RS13400	0.59	-0.1
2,872,559	-		DZA65_RS13400	0.59	-0.8
2,872,633	+		DZA65_RS13400	0.67	-0.9
2,872,634	-		DZA65_RS13400	0.67	+0.7
2,872,634	-		DZA65_RS13400	0.67	-3.1
2,872,647	+		DZA65_RS13400	0.69	+1.0
2,872,647	+		DZA65_RS13400	0.69	+1.1
2,872,647	+		DZA65_RS13400	0.69	+0.1
2,872,647	+		DZA65_RS13400	0.69	-1.8
2,872,648	-		DZA65_RS13400	0.69	+0.3
2,872,648	-		DZA65_RS13400	0.69	+1.2
2,872,648	-		DZA65_RS13400	0.69	+0.5
2,872,651	+		DZA65_RS13400	0.69	-2.7
2,872,651	+		DZA65_RS13400	0.69	+0.1
2,872,651	+		DZA65_RS13400	0.69	-0.8
2,872,651	+		DZA65_RS13400	0.69	+1.2
2,872,651	+		DZA65_RS13400	0.69	-0.8
2,872,651	+		DZA65_RS13400	0.69	+1.6
2,872,651	+		DZA65_RS13400	0.69	+1.0
2,872,651	+		DZA65_RS13400	0.69	+0.1
2,872,651	+		DZA65_RS13400	0.69	+1.5
2,872,651	+		DZA65_RS13400	0.69	+0.8
2,872,652	-		DZA65_RS13400	0.69	-0.5
2,872,652	-		DZA65_RS13400	0.69	+1.6
2,872,652	-		DZA65_RS13400	0.69	-2.1
2,872,652	-		DZA65_RS13400	0.69	+0.1
2,872,652	-		DZA65_RS13400	0.69	+0.1
2,872,652	-		DZA65_RS13400	0.69	+0.3
2,872,652	-		DZA65_RS13400	0.69	+2.2
2,872,652	-		DZA65_RS13400	0.69	+1.4
2,872,652	-		DZA65_RS13400	0.69	-0.1
2,872,663	+		DZA65_RS13400	0.70	+0.0
2,872,792	+		DZA65_RS13400	0.84	-1.8
2,872,792	+		DZA65_RS13400	0.84	+0.8
2,872,793	-		DZA65_RS13400	0.84	-1.1
2,872,945	+				-1.1
2,872,945	+				+1.1
2,872,945	+				+1.2
2,872,945	+				+0.9
2,872,946	-				-0.2
2,872,946	-				-0.4
2,872,946	-				-0.6
2,872,946	-				+1.1
2,872,946	-				+0.2
2,872,989	-				+0.9
2,873,025	+				-0.5
2,873,025	+				-0.9
2,873,025	+				-0.9
2,873,025	+				+2.2
2,873,025	+				-0.7
2,873,026	-				-2.5
2,873,026	-				+0.7
2,873,061	+				+0.7
2,873,061	+				+0.6
2,873,062	-				-0.7
2,873,062	-				-0.5
2,873,081	-				+1.0
2,873,232	-		DZA65_RS13405	0.22	+0.7
2,873,338	+		DZA65_RS13405	0.31	+0.8
2,873,339	-		DZA65_RS13405	0.32	-1.2
2,873,339	-		DZA65_RS13405	0.32	+1.5
2,873,339	-		DZA65_RS13405	0.32	+1.4
2,873,362	-		DZA65_RS13405	0.34	-0.2
2,873,425	-		DZA65_RS13405	0.39	-0.3
2,873,438	+		DZA65_RS13405	0.40	-0.8
2,873,438	+		DZA65_RS13405	0.40	-0.2
2,873,439	-		DZA65_RS13405	0.40	+0.2
2,873,439	-		DZA65_RS13405	0.40	+0.1
2,873,439	-		DZA65_RS13405	0.40	-0.2
2,873,463	+		DZA65_RS13405	0.42	+0.9
2,873,463	+		DZA65_RS13405	0.42	-1.1
2,873,464	-		DZA65_RS13405	0.42	+1.3
2,873,464	-		DZA65_RS13405	0.42	-0.0
2,873,466	+		DZA65_RS13405	0.43	-1.8
2,873,499	+		DZA65_RS13405	0.45	+0.3
2,873,548	+		DZA65_RS13405	0.50	-1.3
2,873,548	+		DZA65_RS13405	0.50	+0.8
2,873,549	-		DZA65_RS13405	0.50	-0.5
2,873,556	+		DZA65_RS13405	0.50	-0.2
2,873,557	-		DZA65_RS13405	0.50	+1.9
2,873,557	-				+0.8
2,873,641	+		DZA65_RS13405	0.58	-0.5
2,873,641	+		DZA65_RS13405	0.58	+0.4
2,873,641	+		DZA65_RS13405	0.58	+1.8
2,873,641	+		DZA65_RS13405	0.58	+0.5
2,873,642	-		DZA65_RS13405	0.58	-1.4
2,873,642	-		DZA65_RS13405	0.58	+0.5
2,873,932	-		DZA65_RS13405	0.83	-0.6
2,873,932	-		DZA65_RS13405	0.83	+0.1
2,873,952	-		DZA65_RS13405	0.85	+1.7
2,873,991	+		DZA65_RS13405	0.88	+0.5
2,873,991	+		DZA65_RS13405	0.88	+1.5
2,873,991	+		DZA65_RS13405	0.88	-0.1
2,873,992	-		DZA65_RS13405	0.88	-1.0
2,873,999	-		DZA65_RS13405	0.89	+0.5
2,873,999	-		DZA65_RS13405	0.89	+1.0
2,873,999	-		DZA65_RS13405	0.89	+0.8
2,873,999	-		DZA65_RS13405	0.89	-1.0
2,874,107	-				+0.2
2,874,107	-				-1.1
2,874,107	-				-0.7
2,874,330	+		DZA65_RS13410	0.24	-0.2
2,874,331	-		DZA65_RS13410	0.25	-0.1
2,874,390	+		DZA65_RS13410	0.32	-2.3
2,874,554	-		DZA65_RS13410	0.53	+0.9
2,874,565	+		DZA65_RS13410	0.54	-0.2
2,874,565	+		DZA65_RS13410	0.54	-0.1
2,874,565	+		DZA65_RS13410	0.54	+1.8
2,874,565	+		DZA65_RS13410	0.54	+1.1
2,874,565	+		DZA65_RS13410	0.54	+0.5
2,874,566	-		DZA65_RS13410	0.54	+1.1
2,874,566	-		DZA65_RS13410	0.54	-0.3
2,874,566	-		DZA65_RS13410	0.54	+0.4
2,874,566	-		DZA65_RS13410	0.54	+1.4
2,874,566	-		DZA65_RS13410	0.54	+0.3
2,874,566	-		DZA65_RS13410	0.54	+1.1
2,874,566	-		DZA65_RS13410	0.54	-0.1
2,874,566	-		DZA65_RS13410	0.54	+0.0
2,874,566	-		DZA65_RS13410	0.54	-0.9
2,874,566	-		DZA65_RS13410	0.54	-0.2
2,874,566	-		DZA65_RS13410	0.54	-0.7
2,874,616	+		DZA65_RS13410	0.61	+0.5
2,874,616	+		DZA65_RS13410	0.61	+0.6
2,874,764	-		DZA65_RS13410	0.79	-1.8
2,874,813	-		DZA65_RS13410	0.85	+2.5
2,874,813	-		DZA65_RS13410	0.85	+0.9
2,874,813	-		DZA65_RS13410	0.85	+0.7
2,874,826	+		DZA65_RS13410	0.87	-0.5
2,874,826	+		DZA65_RS13410	0.87	-0.3
2,874,827	-		DZA65_RS13410	0.87	-0.7
2,874,908	+				-0.6
2,875,010	+		DZA65_RS13415	0.11	+1.2
2,875,010	+		DZA65_RS13415	0.11	+2.1
2,875,011	-		DZA65_RS13415	0.11	+0.2
2,875,013	+				+0.5
2,875,029	+		DZA65_RS13415	0.13	-0.2
2,875,029	+		DZA65_RS13415	0.13	-0.5
2,875,029	+		DZA65_RS13415	0.13	+0.7
2,875,029	+		DZA65_RS13415	0.13	+0.1
2,875,029	+		DZA65_RS13415	0.13	-1.5
2,875,029	+		DZA65_RS13415	0.13	+1.3
2,875,030	-		DZA65_RS13415	0.13	-0.5
2,875,030	-		DZA65_RS13415	0.13	-1.9
2,875,030	-		DZA65_RS13415	0.13	-1.2
2,875,030	-		DZA65_RS13415	0.13	+1.0
2,875,030	-		DZA65_RS13415	0.13	+0.0
2,875,030	-		DZA65_RS13415	0.13	+0.0
2,875,091	+		DZA65_RS13415	0.21	-0.9