Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11085

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
2,347,265	+		DZA65_RS11080	0.39	-0.9
2,347,265	+				-2.0
2,347,265	+		DZA65_RS11080	0.39	-1.0
2,347,265	+		DZA65_RS11080	0.39	-0.9
2,347,265	+		DZA65_RS11080	0.39	-1.4
2,347,265	+		DZA65_RS11080	0.39	+1.6
2,347,265	+		DZA65_RS11080	0.39	-1.3
2,347,265	+		DZA65_RS11080	0.39	+1.2
2,347,266	-		DZA65_RS11080	0.39	+0.4
2,347,266	-		DZA65_RS11080	0.39	+1.0
2,347,266	-		DZA65_RS11080	0.39	+0.3
2,347,266	-		DZA65_RS11080	0.39	+0.1
2,347,266	-		DZA65_RS11080	0.39	+0.6
2,347,269	+		DZA65_RS11080	0.39	-0.4
2,347,269	+		DZA65_RS11080	0.39	+1.5
2,347,270	-		DZA65_RS11080	0.39	-2.3
2,347,279	+		DZA65_RS11080	0.40	-0.7
2,347,279	+		DZA65_RS11080	0.40	+1.3
2,347,279	+		DZA65_RS11080	0.40	-1.1
2,347,279	+		DZA65_RS11080	0.40	-0.7
2,347,280	-		DZA65_RS11080	0.40	-2.5
2,347,334	+		DZA65_RS11080	0.43	+0.1
2,347,334	+		DZA65_RS11080	0.43	-0.5
2,347,414	+		DZA65_RS11080	0.49	-0.0
2,347,418	+		DZA65_RS11080	0.49	+0.3
2,347,418	+		DZA65_RS11080	0.49	-0.2
2,347,418	+		DZA65_RS11080	0.49	+0.2
2,347,418	+		DZA65_RS11080	0.49	+0.3
2,347,418	+		DZA65_RS11080	0.49	+0.7
2,347,418	+		DZA65_RS11080	0.49	-0.2
2,347,419	-		DZA65_RS11080	0.49	-1.3
2,347,419	-		DZA65_RS11080	0.49	+1.5
2,347,419	-		DZA65_RS11080	0.49	-2.6
2,347,419	-		DZA65_RS11080	0.49	-0.5
2,347,419	-		DZA65_RS11080	0.49	-0.5
2,347,419	-		DZA65_RS11080	0.49	+0.8
2,347,709	-		DZA65_RS11080	0.68	-1.0
2,347,716	+		DZA65_RS11080	0.68	-2.3
2,347,716	+		DZA65_RS11080	0.68	+2.8
2,347,741	+		DZA65_RS11080	0.70	+0.5
2,347,742	-		DZA65_RS11080	0.70	+0.1
2,347,742	-		DZA65_RS11080	0.70	-0.4
2,347,762	+		DZA65_RS11080	0.71	-0.3
2,347,762	+		DZA65_RS11080	0.71	+0.3
2,347,763	-		DZA65_RS11080	0.71	-2.7
2,347,763	-		DZA65_RS11080	0.71	-2.0
2,347,763	-		DZA65_RS11080	0.71	+0.2
2,347,763	-		DZA65_RS11080	0.71	-1.1
2,347,763	-		DZA65_RS11080	0.71	+0.1
2,347,765	+		DZA65_RS11080	0.72	+1.3
2,347,765	+		DZA65_RS11080	0.72	+1.6
2,347,765	+		DZA65_RS11080	0.72	+0.3
2,347,765	+		DZA65_RS11080	0.72	-1.7
2,347,765	+		DZA65_RS11080	0.72	+0.1
2,347,766	-		DZA65_RS11080	0.72	+1.6
2,347,766	-		DZA65_RS11080	0.72	+1.0
2,347,766	-		DZA65_RS11080	0.72	+2.1
2,347,766	-		DZA65_RS11080	0.72	-2.3
2,347,819	+		DZA65_RS11080	0.75	+0.1
2,347,820	-		DZA65_RS11080	0.75	-1.1
2,347,988	+		DZA65_RS11080	0.86	+1.9
2,347,988	+		DZA65_RS11080	0.86	-0.3
2,347,988	+				+0.3
2,347,988	+		DZA65_RS11080	0.86	+0.5
2,347,988	+		DZA65_RS11080	0.86	-0.1
2,347,989	-		DZA65_RS11080	0.86	+3.0
2,347,989	-		DZA65_RS11080	0.86	+2.6
2,347,989	-		DZA65_RS11080	0.86	-0.3
2,348,000	+		DZA65_RS11080	0.87	-0.7
2,348,000	+		DZA65_RS11080	0.87	-0.3
2,348,001	-		DZA65_RS11080	0.87	-1.7
2,348,001	-		DZA65_RS11080	0.87	-1.5
2,348,001	-		DZA65_RS11080	0.87	+1.6
2,348,001	-		DZA65_RS11080	0.87	+0.2
2,348,020	+		DZA65_RS11080	0.88	+1.6
2,348,222	-				+0.0
2,348,288	+				-1.4
2,348,288	+				+0.0
2,348,288	+				-1.7
2,348,289	-				+0.4
2,348,289	-				+0.3
2,348,329	+		DZA65_RS11085	0.11	+0.3
2,348,329	+		DZA65_RS11085	0.11	+0.1
2,348,329	+		DZA65_RS11085	0.11	-0.9
2,348,329	+		DZA65_RS11085	0.11	+1.6
2,348,329	+		DZA65_RS11085	0.11	-1.0
2,348,329	+		DZA65_RS11085	0.11	+1.5
2,348,330	-		DZA65_RS11085	0.12	-1.3
2,348,330	-		DZA65_RS11085	0.12	+1.3
2,348,330	-		DZA65_RS11085	0.12	-1.7
2,348,330	-		DZA65_RS11085	0.12	+1.1
2,348,330	-		DZA65_RS11085	0.12	-1.0
2,348,334	+		DZA65_RS11085	0.12	+0.1
2,348,335	-		DZA65_RS11085	0.12	-2.3
2,348,626	+		DZA65_RS11085	0.42	-0.5
2,348,627	-		DZA65_RS11085	0.42	-1.0
2,348,654	+		DZA65_RS11085	0.44	-0.4
2,348,654	+		DZA65_RS11085	0.44	+0.3
2,348,654	+		DZA65_RS11085	0.44	-0.7
2,348,654	+		DZA65_RS11085	0.44	-0.9
2,348,655	-		DZA65_RS11085	0.44	-1.2
2,348,655	-		DZA65_RS11085	0.44	+0.5
2,348,655	-		DZA65_RS11085	0.44	-1.0
2,348,655	-				+0.3
2,348,719	+		DZA65_RS11085	0.51	-0.8
2,348,719	+		DZA65_RS11085	0.51	-0.2
2,348,720	-		DZA65_RS11085	0.51	-2.6
2,348,758	+		DZA65_RS11085	0.55	-0.5
2,348,759	-		DZA65_RS11085	0.55	+0.7
2,348,812	+		DZA65_RS11085	0.60	+0.3
2,348,813	-		DZA65_RS11085	0.60	-0.7
2,348,941	+		DZA65_RS11085	0.73	-0.5
2,349,004	-		DZA65_RS11085	0.80	-0.1
2,349,004	-		DZA65_RS11085	0.80	-0.7
2,349,042	+		DZA65_RS11085	0.84	+0.8
2,349,042	+		DZA65_RS11085	0.84	+0.6
2,349,047	+		DZA65_RS11085	0.84	-1.1
2,349,047	+		DZA65_RS11085	0.84	-0.5
2,349,047	+		DZA65_RS11085	0.84	+1.5
2,349,047	+		DZA65_RS11085	0.84	-0.9
2,349,047	+		DZA65_RS11085	0.84	+0.9
2,349,047	+		DZA65_RS11085	0.84	-0.7
2,349,047	+		DZA65_RS11085	0.84	-0.3
2,349,047	+		DZA65_RS11085	0.84	+1.1
2,349,047	+		DZA65_RS11085	0.84	-2.3
2,349,047	+		DZA65_RS11085	0.84	-0.8
2,349,047	+		DZA65_RS11085	0.84	-0.0
2,349,047	+		DZA65_RS11085	0.84	-0.7
2,349,047	+		DZA65_RS11085	0.84	-0.4
2,349,047	+		DZA65_RS11085	0.84	-0.3
2,349,047	+		DZA65_RS11085	0.84	+1.8
2,349,047	+		DZA65_RS11085	0.84	+0.1
2,349,047	+		DZA65_RS11085	0.84	+0.5
2,349,047	+		DZA65_RS11085	0.84	-1.3
2,349,048	-		DZA65_RS11085	0.84	-1.1
2,349,048	-		DZA65_RS11085	0.84	-1.3
2,349,048	-		DZA65_RS11085	0.84	+0.7
2,349,048	-		DZA65_RS11085	0.84	-1.8
2,349,048	-		DZA65_RS11085	0.84	+1.1
2,349,048	-		DZA65_RS11085	0.84	+0.2
2,349,048	-		DZA65_RS11085	0.84	-0.3
2,349,048	-		DZA65_RS11085	0.84	+0.3
2,349,048	-		DZA65_RS11085	0.84	-1.0
2,349,048	-		DZA65_RS11085	0.84	+1.2
2,349,106	+				-2.5
2,349,106	+				+0.3
2,349,106	+				+0.3
2,349,107	-				-0.4
2,349,107	-				-0.7
2,349,125	+				-1.3
2,349,125	+				+1.3
2,349,125	+				-0.3
2,349,125	+				-0.8
2,349,125	+				-1.1
2,349,126	-				-0.9
2,349,126	-				-0.7
2,349,126	-				+0.0
2,349,126	-				-0.7
2,349,126	-				+0.7
2,349,174	-				-1.0
2,349,238	+				+1.0
2,349,273	+				-0.3
2,349,273	+				-2.5
2,349,273	+				-1.0
2,349,273	+				+0.5
2,349,273	+				-1.7
2,349,274	-				-2.0
2,349,274	-				+0.7
2,349,274	-				+0.5
2,349,274	-				-0.4
2,349,274	-				-0.7
2,349,274	-				-0.4
2,349,274	-				+1.3
2,349,274	-				+0.1
2,349,337	-				-1.1
2,349,352	+				+0.6
2,349,407	+		DZA65_RS11090	0.14	-0.4
2,349,407	+		DZA65_RS11090	0.14	+1.7
2,349,408	-		DZA65_RS11090	0.15	+2.1
2,349,408	-		DZA65_RS11090	0.15	+1.3
2,349,408	-		DZA65_RS11090	0.15	+2.2
2,349,417	+		DZA65_RS11090	0.15	-1.0
2,349,417	+		DZA65_RS11090	0.15	+1.2
2,349,417	+		DZA65_RS11090	0.15	+0.6
2,349,417	+		DZA65_RS11090	0.15	+0.2
2,349,417	+		DZA65_RS11090	0.15	+1.2
2,349,418	-				+1.7
2,349,418	-		DZA65_RS11090	0.16	+0.2
2,349,434	+		DZA65_RS11090	0.17	+0.9
2,349,435	-		DZA65_RS11090	0.17	-0.4
2,349,470	+		DZA65_RS11090	0.21	+0.0
2,349,526	-		DZA65_RS11090	0.27	-0.2
2,349,529	-		DZA65_RS11090	0.27	-0.8
2,349,574	-		DZA65_RS11090	0.32	+0.4
2,349,681	-		DZA65_RS11090	0.43	+1.9
2,349,950	+		DZA65_RS11090	0.72	-0.5
2,349,950	+		DZA65_RS11090	0.72	-0.1
2,349,950	+		DZA65_RS11090	0.72	-2.0
2,350,000	+		DZA65_RS11090	0.77	+3.6
2,350,062	+		DZA65_RS11090	0.83	-0.2
2,350,062	+		DZA65_RS11090	0.83	+0.3
2,350,063	-		DZA65_RS11090	0.83	+0.6