Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11075

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
2,344,758	+		DZA65_RS11070	0.73	+0.3
2,344,758	+		DZA65_RS11070	0.73	-0.1
2,344,758	+		DZA65_RS11070	0.73	+1.3
2,344,758	+		DZA65_RS11070	0.73	-2.1
2,344,759	-		DZA65_RS11070	0.73	-0.4
2,344,782	+		DZA65_RS11070	0.74	+0.9
2,344,783	-		DZA65_RS11070	0.74	-2.5
2,344,783	-		DZA65_RS11070	0.74	+0.2
2,344,925	+		DZA65_RS11070	0.83	-0.5
2,344,925	+		DZA65_RS11070	0.83	-0.7
2,344,925	+		DZA65_RS11070	0.83	-1.3
2,344,925	+		DZA65_RS11070	0.83	+0.3
2,344,925	+		DZA65_RS11070	0.83	+0.4
2,344,925	+		DZA65_RS11070	0.83	+0.9
2,344,925	+		DZA65_RS11070	0.83	+0.1
2,344,926	-		DZA65_RS11070	0.83	+0.3
2,344,926	-		DZA65_RS11070	0.83	-0.7
2,345,015	+		DZA65_RS11070	0.88	+0.1
2,345,040	+		DZA65_RS11070	0.89	+1.7
2,345,041	-		DZA65_RS11070	0.90	-0.4
2,345,041	-		DZA65_RS11070	0.90	-0.5
2,345,041	-		DZA65_RS11070	0.90	+1.6
2,345,041	-		DZA65_RS11070	0.90	+0.3
2,345,085	+				-1.3
2,345,085	+				+1.1
2,345,085	+				-2.0
2,345,085	+				-1.3
2,345,085	+				-2.1
2,345,085	+				-1.4
2,345,086	-				-1.7
2,345,086	-				-0.5
2,345,109	+				+1.8
2,345,113	-				-0.1
2,345,113	-				+1.3
2,345,113	-				+0.3
2,345,113	-				-0.7
2,345,200	+				-0.7
2,345,200	+				-0.4
2,345,201	-				-0.7
2,345,234	+				+0.1
2,345,234	+				+1.1
2,345,241	-				-2.3
2,345,256	+				-0.2
2,345,257	-				-0.7
2,345,257	-				+0.1
2,345,261	+				-0.3
2,345,304	+				+0.3
2,345,304	+				-2.0
2,345,304	+				-0.3
2,345,304	+				-0.1
2,345,305	-				+1.4
2,345,349	-				-2.8
2,345,384	-				-0.7
2,345,397	-				+2.0
2,345,413	-				-0.1
2,345,413	-				-2.4
2,345,451	+				-1.7
2,345,451	+				+0.3
2,345,470	-				+1.7
2,345,488	-				-1.7
2,345,541	-				+0.3
2,345,575	+				+0.5
2,345,581	+				-2.0
2,345,582	-				-0.9
2,345,582	-				+0.1
2,345,607	+				-0.8
2,345,607	+				-0.3
2,345,608	-				-1.7
2,345,608	-				+1.3
2,345,608	-				+0.0
2,345,649	+				-0.6
2,345,677	-				-0.9
2,345,862	+		DZA65_RS11075	0.26	-0.7
2,345,890	-		DZA65_RS11075	0.29	+0.5
2,345,894	+		DZA65_RS11075	0.30	-1.3
2,345,895	-		DZA65_RS11075	0.30	+0.0
2,345,895	-		DZA65_RS11075	0.30	+1.1
2,345,895	-		DZA65_RS11075	0.30	-0.5
2,345,895	-		DZA65_RS11075	0.30	+0.2
2,345,911	+		DZA65_RS11075	0.31	-1.0
2,345,911	+		DZA65_RS11075	0.31	-1.7
2,345,911	+		DZA65_RS11075	0.31	+0.2
2,345,911	+		DZA65_RS11075	0.31	+0.1
2,345,912	-		DZA65_RS11075	0.32	-0.7
2,345,912	-		DZA65_RS11075	0.32	+1.7
2,345,912	-		DZA65_RS11075	0.32	+0.5
2,346,124	-		DZA65_RS11075	0.53	+1.1
2,346,178	+		DZA65_RS11075	0.59	-0.2
2,346,178	+		DZA65_RS11075	0.59	+1.9
2,346,178	+		DZA65_RS11075	0.59	-1.4
2,346,178	+		DZA65_RS11075	0.59	+1.6
2,346,179	-		DZA65_RS11075	0.59	+0.5
2,346,179	-		DZA65_RS11075	0.59	+0.5
2,346,205	-		DZA65_RS11075	0.61	+0.5
2,346,350	+		DZA65_RS11075	0.76	+1.1
2,346,416	-		DZA65_RS11075	0.83	-0.1
2,346,451	+		DZA65_RS11075	0.86	+1.8
2,346,451	+		DZA65_RS11075	0.86	-0.7
2,346,452	-		DZA65_RS11075	0.86	-0.4
2,346,459	+		DZA65_RS11075	0.87	+0.2
2,346,459	+		DZA65_RS11075	0.87	-0.5
2,346,459	+		DZA65_RS11075	0.87	+0.9
2,346,459	+		DZA65_RS11075	0.87	-0.3
2,346,583	+				-1.5
2,346,583	+				-3.0
2,346,583	+				+1.5
2,346,583	+				-0.1
2,346,583	+				-1.6
2,346,583	+				+0.8
2,346,583	+				-0.7
2,346,584	-				+0.0
2,346,584	-				+1.2
2,346,681	+				+0.9
2,346,681	+				+0.3
2,346,681	+				+0.5
2,346,682	-				-0.7
2,346,682	-				+0.6
2,346,692	+				-0.3
2,346,692	+				-0.7
2,346,692	+				+2.3
2,346,692	+				+0.1
2,346,692	+				+1.6
2,346,692	+				-1.7
2,346,693	-				-0.8
2,346,693	-				-3.0
2,346,693	-				-2.0
2,346,693	-				-0.7
2,346,693	-				+0.7
2,346,696	+				+1.3
2,346,697	-				+2.0
2,346,842	+		DZA65_RS11080	0.11	-0.4
2,346,842	+		DZA65_RS11080	0.11	-1.2
2,346,842	+		DZA65_RS11080	0.11	+1.1
2,346,842	+		DZA65_RS11080	0.11	-0.3
2,346,842	+		DZA65_RS11080	0.11	-1.3
2,346,843	-		DZA65_RS11080	0.11	-0.4
2,346,843	-		DZA65_RS11080	0.11	-1.8
2,346,843	-		DZA65_RS11080	0.11	+0.0
2,346,869	-		DZA65_RS11080	0.13	-2.0
2,346,872	-		DZA65_RS11080	0.13	-0.9
2,346,931	+				+0.7
2,346,931	+		DZA65_RS11080	0.17	+1.0
2,346,931	+		DZA65_RS11080	0.17	+0.7
2,346,931	+		DZA65_RS11080	0.17	-1.6
2,346,931	+		DZA65_RS11080	0.17	+0.3
2,346,931	+		DZA65_RS11080	0.17	+1.0
2,346,932	-		DZA65_RS11080	0.17	+1.3
2,346,932	-		DZA65_RS11080	0.17	+0.7
2,346,932	-		DZA65_RS11080	0.17	+0.6
2,346,935	+		DZA65_RS11080	0.17	+0.2
2,346,936	-		DZA65_RS11080	0.17	+0.5
2,346,936	-		DZA65_RS11080	0.17	-0.8
2,346,983	+		DZA65_RS11080	0.20	-1.0
2,346,983	+		DZA65_RS11080	0.20	+0.9
2,346,983	+		DZA65_RS11080	0.20	-0.8
2,346,983	+		DZA65_RS11080	0.20	+0.2
2,346,983	+		DZA65_RS11080	0.20	-1.6
2,346,983	+		DZA65_RS11080	0.20	+1.2
2,346,983	+		DZA65_RS11080	0.20	-0.0
2,346,984	-		DZA65_RS11080	0.20	+0.2
2,346,984	-		DZA65_RS11080	0.20	-0.7
2,346,984	-		DZA65_RS11080	0.20	+1.7
2,346,984	-		DZA65_RS11080	0.20	-1.8
2,347,038	-		DZA65_RS11080	0.24	+0.3
2,347,038	-		DZA65_RS11080	0.24	+0.4
2,347,056	+		DZA65_RS11080	0.25	+0.1
2,347,056	+		DZA65_RS11080	0.25	-0.1
2,347,056	+		DZA65_RS11080	0.25	+1.3
2,347,056	+		DZA65_RS11080	0.25	-0.6
2,347,088	-		DZA65_RS11080	0.27	+0.8
2,347,100	+		DZA65_RS11080	0.28	-0.8
2,347,100	+		DZA65_RS11080	0.28	+0.0
2,347,153	+		DZA65_RS11080	0.31	-0.7
2,347,154	-		DZA65_RS11080	0.31	+0.6
2,347,265	+		DZA65_RS11080	0.39	-0.9
2,347,265	+				-2.0
2,347,265	+		DZA65_RS11080	0.39	-1.0
2,347,265	+		DZA65_RS11080	0.39	-0.9
2,347,265	+		DZA65_RS11080	0.39	-1.4
2,347,265	+		DZA65_RS11080	0.39	+1.6
2,347,265	+		DZA65_RS11080	0.39	-1.3
2,347,265	+		DZA65_RS11080	0.39	+1.2
2,347,266	-		DZA65_RS11080	0.39	+0.4
2,347,266	-		DZA65_RS11080	0.39	+1.0
2,347,266	-		DZA65_RS11080	0.39	+0.3
2,347,266	-		DZA65_RS11080	0.39	+0.1
2,347,266	-		DZA65_RS11080	0.39	+0.6
2,347,269	+		DZA65_RS11080	0.39	-0.4
2,347,269	+		DZA65_RS11080	0.39	+1.5
2,347,270	-		DZA65_RS11080	0.39	-2.3
2,347,279	+		DZA65_RS11080	0.40	-0.7
2,347,279	+		DZA65_RS11080	0.40	+1.3
2,347,279	+		DZA65_RS11080	0.40	-1.1
2,347,279	+		DZA65_RS11080	0.40	-0.7
2,347,280	-		DZA65_RS11080	0.40	-2.5
2,347,334	+		DZA65_RS11080	0.43	+0.1
2,347,334	+		DZA65_RS11080	0.43	-0.5
2,347,414	+		DZA65_RS11080	0.49	-0.0
2,347,418	+		DZA65_RS11080	0.49	+0.3
2,347,418	+		DZA65_RS11080	0.49	-0.2
2,347,418	+		DZA65_RS11080	0.49	+0.2
2,347,418	+		DZA65_RS11080	0.49	+0.3
2,347,418	+		DZA65_RS11080	0.49	+0.7
2,347,418	+		DZA65_RS11080	0.49	-0.2
2,347,419	-		DZA65_RS11080	0.49	-1.3
2,347,419	-		DZA65_RS11080	0.49	+1.5
2,347,419	-		DZA65_RS11080	0.49	-2.6
2,347,419	-		DZA65_RS11080	0.49	-0.5
2,347,419	-		DZA65_RS11080	0.49	-0.5
2,347,419	-		DZA65_RS11080	0.49	+0.8