Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08765

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
1,853,511	+				-0.5
1,853,512	-				+0.7
1,853,537	+				-1.2
1,853,538	-				-0.6
1,853,565	+				+0.0
1,853,565	+				+0.1
1,853,618	+		DZA65_RS08760	0.10	-2.2
1,853,618	+		DZA65_RS08760	0.10	-1.2
1,853,618	+		DZA65_RS08760	0.10	-0.5
1,853,618	+		DZA65_RS08760	0.10	-0.9
1,853,619	-		DZA65_RS08760	0.10	-0.7
1,853,619	-		DZA65_RS08760	0.10	-0.6
1,853,619	-		DZA65_RS08760	0.10	-0.1
1,853,619	-		DZA65_RS08760	0.10	-1.5
1,853,619	-		DZA65_RS08760	0.10	+0.2
1,853,619	-		DZA65_RS08760	0.10	-2.7
1,853,654	-		DZA65_RS08760	0.14	-1.6
1,853,654	-		DZA65_RS08760	0.14	-0.7
1,853,693	+		DZA65_RS08760	0.19	+1.0
1,853,693	+		DZA65_RS08760	0.19	-0.3
1,853,693	+		DZA65_RS08760	0.19	+0.7
1,853,693	+		DZA65_RS08760	0.19	-0.9
1,853,693	+		DZA65_RS08760	0.19	-1.7
1,853,693	+		DZA65_RS08760	0.19	-0.3
1,853,693	+		DZA65_RS08760	0.19	+0.7
1,853,693	+		DZA65_RS08760	0.19	+1.4
1,853,693	+				+0.4
1,853,694	-		DZA65_RS08760	0.19	-1.4
1,853,694	-		DZA65_RS08760	0.19	+0.2
1,853,714	+		DZA65_RS08760	0.21	-2.2
1,853,714	+		DZA65_RS08760	0.21	+3.7
1,853,778	+		DZA65_RS08760	0.29	+0.7
1,853,778	+				-0.2
1,853,779	-		DZA65_RS08760	0.29	-1.9
1,853,814	+		DZA65_RS08760	0.33	+0.5
1,853,814	+		DZA65_RS08760	0.33	+0.1
1,853,814	+		DZA65_RS08760	0.33	+0.1
1,853,815	-		DZA65_RS08760	0.33	-1.6
1,853,825	-		DZA65_RS08760	0.34	-0.9
1,853,825	-		DZA65_RS08760	0.34	+0.7
1,853,825	-		DZA65_RS08760	0.34	+1.2
1,853,933	+		DZA65_RS08760	0.47	+0.1
1,853,933	+		DZA65_RS08760	0.47	+0.4
1,853,933	+		DZA65_RS08760	0.47	-0.0
1,853,933	+		DZA65_RS08760	0.47	+0.2
1,853,933	+		DZA65_RS08760	0.47	-0.0
1,853,933	+		DZA65_RS08760	0.47	-0.4
1,853,933	+		DZA65_RS08760	0.47	+0.4
1,853,933	+		DZA65_RS08760	0.47	-0.6
1,853,962	-		DZA65_RS08760	0.50	-2.2
1,853,962	-		DZA65_RS08760	0.50	-3.5
1,853,962	-		DZA65_RS08760	0.50	+0.4
1,854,065	-		DZA65_RS08760	0.62	+0.7
1,854,261	+		DZA65_RS08760	0.85	-0.2
1,854,262	-		DZA65_RS08760	0.85	+0.7
1,854,262	-		DZA65_RS08760	0.85	-0.8
1,854,262	-		DZA65_RS08760	0.85	+1.5
1,854,262	-		DZA65_RS08760	0.85	-0.6
1,854,262	-		DZA65_RS08760	0.85	-0.6
1,854,301	-				-2.2
1,854,301	-				+2.7
1,854,316	-				-0.7
1,854,316	-				-0.6
1,854,316	-				-0.1
1,854,316	-				+0.3
1,854,318	-				+0.4
1,854,401	+				-0.2
1,854,402	-				-0.4
1,854,423	+				-0.7
1,854,423	+				+0.6
1,854,425	+				-0.7
1,854,426	-				+0.4
1,854,426	-				+0.4
1,854,445	+				-0.2
1,854,445	+				-0.2
1,854,446	-				-0.1
1,854,462	+				+0.9
1,854,500	+				-0.8
1,854,500	+				-0.0
1,854,500	+				+0.1
1,854,500	+				+1.6
1,854,500	+				+1.2
1,854,501	-				+0.1
1,854,501	-				+0.1
1,854,501	-				+1.1
1,854,501	-				+0.3
1,854,501	-				-0.8
1,854,501	-				+0.4
1,854,501	-				+0.5
1,854,501	-				+0.8
1,854,523	-				+1.0
1,854,523	-				-0.4
1,854,526	+				-0.2
1,854,527	-				+0.4
1,854,554	-				+1.3
1,854,554	-				-1.7
1,854,554	-				-2.9
1,854,559	+				+0.8
1,854,560	-				+0.4
1,854,560	-				+0.4
1,854,560	-				+1.0
1,854,560	-				+2.3
1,854,560	-				+0.6
1,854,560	-				-0.6
1,854,561	+				+0.1
1,854,561	+				+1.3
1,854,561	+				-0.6
1,854,561	+				-1.0
1,854,561	+				-0.7
1,854,562	-				-0.5
1,854,562	-				-1.9
1,854,562	-				+0.1
1,854,562	-				+0.0
1,854,562	-				-1.9
1,854,601	-		DZA65_RS08765	0.14	+0.4
1,854,601	-		DZA65_RS08765	0.14	-1.0
1,854,624	-		DZA65_RS08765	0.17	-1.6
1,854,648	+		DZA65_RS08765	0.19	-2.2
1,854,649	-		DZA65_RS08765	0.20	+0.7
1,854,671	+		DZA65_RS08765	0.22	+0.0
1,854,687	+		DZA65_RS08765	0.24	+0.5
1,854,724	-		DZA65_RS08765	0.28	-0.3
1,854,741	+		DZA65_RS08765	0.30	-0.6
1,854,775	+		DZA65_RS08765	0.34	-0.0
1,854,775	+		DZA65_RS08765	0.34	-0.3
1,854,775	+		DZA65_RS08765	0.34	-0.3
1,854,776	-		DZA65_RS08765	0.34	-0.2
1,854,776	-		DZA65_RS08765	0.34	+1.0
1,854,810	+		DZA65_RS08765	0.38	-0.1
1,854,875	+		DZA65_RS08765	0.45	-1.4
1,854,875	+		DZA65_RS08765	0.45	-1.5
1,854,875	+		DZA65_RS08765	0.45	-0.6
1,854,875	+		DZA65_RS08765	0.45	+0.1
1,854,876	-		DZA65_RS08765	0.45	-3.0
1,854,876	-		DZA65_RS08765	0.45	-2.2
1,854,876	-		DZA65_RS08765	0.45	-0.9
1,854,876	-		DZA65_RS08765	0.45	+1.0
1,854,876	-		DZA65_RS08765	0.45	+0.6
1,854,876	-		DZA65_RS08765	0.45	-2.6
1,854,876	-		DZA65_RS08765	0.45	+0.8
1,854,878	-		DZA65_RS08765	0.46	+0.1
1,854,916	+		DZA65_RS08765	0.50	+0.4
1,854,917	-		DZA65_RS08765	0.50	+0.5
1,854,968	+		DZA65_RS08765	0.56	+0.4
1,854,968	+		DZA65_RS08765	0.56	-1.6
1,854,981	+		DZA65_RS08765	0.57	-0.9
1,855,000	+		DZA65_RS08765	0.60	-0.8
1,855,000	+		DZA65_RS08765	0.60	+0.4
1,855,000	+		DZA65_RS08765	0.60	+0.2
1,855,000	+		DZA65_RS08765	0.60	+0.7
1,855,000	+		DZA65_RS08765	0.60	+0.6
1,855,000	+		DZA65_RS08765	0.60	+0.4
1,855,000	+		DZA65_RS08765	0.60	-1.6
1,855,001	-		DZA65_RS08765	0.60	-1.7
1,855,001	-		DZA65_RS08765	0.60	-0.8
1,855,001	-		DZA65_RS08765	0.60	+2.5
1,855,001	-		DZA65_RS08765	0.60	-1.5
1,855,001	-		DZA65_RS08765	0.60	-1.2
1,855,001	-		DZA65_RS08765	0.60	+0.7
1,855,001	-		DZA65_RS08765	0.60	-1.6
1,855,001	-		DZA65_RS08765	0.60	+0.5
1,855,015	+		DZA65_RS08765	0.61	-1.9
1,855,015	+		DZA65_RS08765	0.61	-0.2
1,855,016	-		DZA65_RS08765	0.61	-1.3
1,855,016	-		DZA65_RS08765	0.61	+0.3
1,855,017	+		DZA65_RS08765	0.62	+0.7
1,855,017	+				-1.2
1,855,017	+		DZA65_RS08765	0.62	+0.1
1,855,057	+		DZA65_RS08765	0.66	-0.2
1,855,057	+		DZA65_RS08765	0.66	+0.1
1,855,057	+		DZA65_RS08765	0.66	-1.1
1,855,057	+		DZA65_RS08765	0.66	+0.2
1,855,057	+		DZA65_RS08765	0.66	-2.4
1,855,057	+		DZA65_RS08765	0.66	+0.4
1,855,057	+		DZA65_RS08765	0.66	-1.3
1,855,057	+		DZA65_RS08765	0.66	+1.6
1,855,057	+		DZA65_RS08765	0.66	+0.2
1,855,057	+		DZA65_RS08765	0.66	+1.6
1,855,057	+		DZA65_RS08765	0.66	+0.3
1,855,058	-		DZA65_RS08765	0.66	-0.6
1,855,058	-		DZA65_RS08765	0.66	+0.6
1,855,059	+		DZA65_RS08765	0.66	+0.1
1,855,060	-				+0.7
1,855,085	+		DZA65_RS08765	0.69	+0.7
1,855,136	+		DZA65_RS08765	0.75	+3.1
1,855,137	-		DZA65_RS08765	0.75	+0.9
1,855,149	+		DZA65_RS08765	0.77	+0.2
1,855,150	-		DZA65_RS08765	0.77	-2.3
1,855,164	-		DZA65_RS08765	0.78	-0.3
1,855,164	-		DZA65_RS08765	0.78	+1.6
1,855,164	-		DZA65_RS08765	0.78	+1.6
1,855,164	-		DZA65_RS08765	0.78	+0.5
1,855,220	+		DZA65_RS08765	0.85	-1.2
1,855,224	+		DZA65_RS08765	0.85	+1.4
1,855,224	+		DZA65_RS08765	0.85	+1.4
1,855,224	+		DZA65_RS08765	0.85	+2.4
1,855,225	-		DZA65_RS08765	0.85	+2.5
1,855,236	+		DZA65_RS08765	0.87	+0.4
1,855,272	+				-0.9
1,855,272	+				+0.6
1,855,273	-				-0.6
1,855,273	-				-0.6
1,855,273	-				-1.0
1,855,278	+				+0.0
1,855,279	-				+1.7
1,855,279	-				-3.3
1,855,279	-				-0.1
1,855,292	+				+0.0
1,855,293	-				+0.1
1,855,307	-				-2.6
1,855,312	-				-0.2
1,855,312	-				+0.4
1,855,356	+				-1.9
1,855,424	+				-1.2
1,855,429	+				+0.4
1,855,429	+				+0.7
1,855,430	-				-0.9
1,855,430	-				+1.2
1,855,440	-				+1.7
1,855,474	-				-1.6
1,855,525	+				-1.9
1,855,525	+				+0.3
1,855,525	+				+0.7
1,855,525	+				-0.6
1,855,549	+				-1.2
1,855,596	-				+1.6
1,855,602	-				+1.3
1,855,691	+		DZA65_RS08770	0.17	-0.4
1,855,731	+		DZA65_RS08770	0.21	-0.9
1,855,826	+		DZA65_RS08770	0.32	-0.2
1,855,826	+		DZA65_RS08770	0.32	-1.6
1,855,826	+		DZA65_RS08770	0.32	+0.5
1,855,826	+		DZA65_RS08770	0.32	-0.9
1,855,827	-		DZA65_RS08770	0.32	-2.4
1,855,827	-		DZA65_RS08770	0.32	+0.1
1,855,827	-		DZA65_RS08770	0.32	+0.2
1,855,844	+		DZA65_RS08770	0.34	-1.9
1,855,926	+		DZA65_RS08770	0.43	-0.7
1,855,973	+		DZA65_RS08770	0.48	-1.9
1,855,973	+				+0.0
1,855,973	+		DZA65_RS08770	0.48	+1.1
1,855,973	+		DZA65_RS08770	0.48	-0.7
1,855,974	-		DZA65_RS08770	0.49	-0.2
1,856,048	+		DZA65_RS08770	0.57	+1.4
1,856,048	+		DZA65_RS08770	0.57	+0.7
1,856,048	+				+0.7
1,856,048	+		DZA65_RS08770	0.57	-0.9
1,856,048	+		DZA65_RS08770	0.57	-2.2
1,856,048	+		DZA65_RS08770	0.57	-1.3
1,856,048	+		DZA65_RS08770	0.57	+0.0
1,856,048	+		DZA65_RS08770	0.57	-0.2
1,856,048	+		DZA65_RS08770	0.57	-0.2
1,856,049	-		DZA65_RS08770	0.57	-0.1
1,856,049	-		DZA65_RS08770	0.57	-0.2
1,856,049	-		DZA65_RS08770	0.57	-2.7
1,856,049	-		DZA65_RS08770	0.57	-2.6
1,856,049	-		DZA65_RS08770	0.57	-0.9
1,856,049	-		DZA65_RS08770	0.57	-1.4
1,856,050	+		DZA65_RS08770	0.57	-3.0
1,856,050	+		DZA65_RS08770	0.57	-1.0
1,856,050	+		DZA65_RS08770	0.57	+0.2
1,856,050	+		DZA65_RS08770	0.57	-0.2
1,856,051	-		DZA65_RS08770	0.57	-0.6
1,856,051	-		DZA65_RS08770	0.57	+0.7
1,856,059	+		DZA65_RS08770	0.58	+0.0
1,856,059	+		DZA65_RS08770	0.58	-1.7
1,856,059	+		DZA65_RS08770	0.58	-1.6
1,856,059	+		DZA65_RS08770	0.58	-1.6
1,856,059	+		DZA65_RS08770	0.58	+0.8
1,856,060	-		DZA65_RS08770	0.58	-1.1
1,856,060	-		DZA65_RS08770	0.58	+1.3
1,856,060	-		DZA65_RS08770	0.58	-1.2
1,856,060	-		DZA65_RS08770	0.58	+0.2
1,856,060	-		DZA65_RS08770	0.58	+0.5
1,856,060	-		DZA65_RS08770	0.58	+0.6
1,856,082	+		DZA65_RS08770	0.61	-0.4
1,856,083	-		DZA65_RS08770	0.61	+0.7
1,856,083	-		DZA65_RS08770	0.61	+0.1
1,856,087	-		DZA65_RS08770	0.61	+0.4
1,856,160	+		DZA65_RS08770	0.69	+0.4
1,856,161	-		DZA65_RS08770	0.69	-0.8
1,856,162	+		DZA65_RS08770	0.70	+0.0
1,856,162	+		DZA65_RS08770	0.70	+0.7
1,856,163	-		DZA65_RS08770	0.70	-1.5
1,856,163	-		DZA65_RS08770	0.70	-0.2
1,856,163	-		DZA65_RS08770	0.70	+0.8
1,856,163	-		DZA65_RS08770	0.70	-0.5
1,856,163	-		DZA65_RS08770	0.70	+0.9
1,856,198	-		DZA65_RS08770	0.74	+1.2
1,856,314	+		DZA65_RS08770	0.87	+2.2
1,856,314	+		DZA65_RS08770	0.87	+0.9
1,856,314	+		DZA65_RS08770	0.87	-0.9
1,856,314	+		DZA65_RS08770	0.87	-2.4
1,856,314	+				-1.2
1,856,314	+		DZA65_RS08770	0.87	-2.6
1,856,315	-		DZA65_RS08770	0.87	-0.7
1,856,315	-		DZA65_RS08770	0.87	-0.6
1,856,315	-		DZA65_RS08770	0.87	+0.4
1,856,315	-		DZA65_RS08770	0.87	-0.8