Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08415

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
1,775,609	+		DZA65_RS08410	0.41	+1.6
1,775,609	+		DZA65_RS08410	0.41	-1.0
1,775,609	+		DZA65_RS08410	0.41	+0.5
1,775,609	+		DZA65_RS08410	0.41	-0.7
1,775,609	+		DZA65_RS08410	0.41	-0.7
1,775,609	+		DZA65_RS08410	0.41	-0.3
1,775,610	-		DZA65_RS08410	0.41	-0.4
1,775,610	-		DZA65_RS08410	0.41	+0.1
1,775,610	-		DZA65_RS08410	0.41	+0.7
1,775,610	-		DZA65_RS08410	0.41	-0.2
1,775,610	-		DZA65_RS08410	0.41	-0.6
1,775,610	-		DZA65_RS08410	0.41	-1.7
1,775,613	+		DZA65_RS08410	0.41	+1.9
1,775,613	+		DZA65_RS08410	0.41	-0.3
1,775,613	+		DZA65_RS08410	0.41	+0.7
1,775,613	+		DZA65_RS08410	0.41	+0.0
1,775,613	+		DZA65_RS08410	0.41	-0.1
1,775,613	+		DZA65_RS08410	0.41	+0.2
1,775,613	+		DZA65_RS08410	0.41	-2.0
1,775,613	+		DZA65_RS08410	0.41	-1.0
1,775,613	+		DZA65_RS08410	0.41	-0.3
1,775,613	+		DZA65_RS08410	0.41	+1.0
1,775,613	+		DZA65_RS08410	0.41	+1.3
1,775,613	+		DZA65_RS08410	0.41	-0.3
1,775,613	+				-1.6
1,775,613	+		DZA65_RS08410	0.41	+0.7
1,775,613	+		DZA65_RS08410	0.41	+0.8
1,775,613	+		DZA65_RS08410	0.41	-2.1
1,775,613	+		DZA65_RS08410	0.41	+0.2
1,775,613	+		DZA65_RS08410	0.41	-0.6
1,775,613	+		DZA65_RS08410	0.41	-0.4
1,775,613	+		DZA65_RS08410	0.41	+1.2
1,775,613	+		DZA65_RS08410	0.41	-0.7
1,775,613	+		DZA65_RS08410	0.41	+1.3
1,775,614	-		DZA65_RS08410	0.41	-3.1
1,775,614	-		DZA65_RS08410	0.41	+1.9
1,775,614	-		DZA65_RS08410	0.41	+0.0
1,775,614	-		DZA65_RS08410	0.41	-0.7
1,775,614	-		DZA65_RS08410	0.41	+0.2
1,775,614	-		DZA65_RS08410	0.41	-1.1
1,775,614	-		DZA65_RS08410	0.41	-0.1
1,775,614	-		DZA65_RS08410	0.41	-0.9
1,775,614	-		DZA65_RS08410	0.41	-0.6
1,775,614	-		DZA65_RS08410	0.41	-2.6
1,775,614	-		DZA65_RS08410	0.41	+0.3
1,775,614	-		DZA65_RS08410	0.41	+0.4
1,775,614	-		DZA65_RS08410	0.41	+0.0
1,775,614	-		DZA65_RS08410	0.41	+0.5
1,775,614	-		DZA65_RS08410	0.41	-1.1
1,775,614	-		DZA65_RS08410	0.41	-0.9
1,775,614	-		DZA65_RS08410	0.41	-0.6
1,775,614	-		DZA65_RS08410	0.41	-0.4
1,775,616	-		DZA65_RS08410	0.41	-2.6
1,775,624	+		DZA65_RS08410	0.42	+1.4
1,775,702	+		DZA65_RS08410	0.50	+0.4
1,775,702	+		DZA65_RS08410	0.50	-0.9
1,775,703	-		DZA65_RS08410	0.50	+0.1
1,775,703	-				+1.0
1,775,723	+		DZA65_RS08410	0.52	-0.3
1,775,723	+		DZA65_RS08410	0.52	+0.4
1,775,724	-		DZA65_RS08410	0.52	+2.0
1,775,840	+		DZA65_RS08410	0.64	-1.1
1,775,858	+		DZA65_RS08410	0.66	+1.6
1,775,859	-		DZA65_RS08410	0.66	-1.3
1,775,950	+		DZA65_RS08410	0.76	-0.1
1,775,950	+		DZA65_RS08410	0.76	-2.7
1,775,951	-		DZA65_RS08410	0.76	-0.7
1,775,987	+		DZA65_RS08410	0.79	+0.6
1,775,988	-		DZA65_RS08410	0.79	+1.2
1,775,988	-		DZA65_RS08410	0.79	-0.1
1,775,988	-		DZA65_RS08410	0.79	-0.8
1,775,988	-		DZA65_RS08410	0.79	-2.4
1,776,023	+		DZA65_RS08410	0.83	+1.2
1,776,023	+		DZA65_RS08410	0.83	+1.0
1,776,023	+		DZA65_RS08410	0.83	-1.3
1,776,024	-		DZA65_RS08410	0.83	+0.4
1,776,041	+		DZA65_RS08410	0.85	-1.6
1,776,041	+		DZA65_RS08410	0.85	+0.4
1,776,082	+		DZA65_RS08410	0.89	-0.4
1,776,082	+		DZA65_RS08410	0.89	-0.4
1,776,082	+		DZA65_RS08410	0.89	+0.6
1,776,082	+		DZA65_RS08410	0.89	-0.1
1,776,082	+		DZA65_RS08410	0.89	+1.4
1,776,082	+		DZA65_RS08410	0.89	-1.6
1,776,082	+		DZA65_RS08410	0.89	-1.9
1,776,082	+				+1.2
1,776,082	+		DZA65_RS08410	0.89	+0.0
1,776,083	-		DZA65_RS08410	0.89	-1.3
1,776,083	-		DZA65_RS08410	0.89	-0.6
1,776,083	-		DZA65_RS08410	0.89	+1.2
1,776,083	-		DZA65_RS08410	0.89	-0.6
1,776,083	-		DZA65_RS08410	0.89	+0.4
1,776,083	-		DZA65_RS08410	0.89	-0.6
1,776,083	-		DZA65_RS08410	0.89	+0.4
1,776,083	-		DZA65_RS08410	0.89	+0.3
1,776,086	+		DZA65_RS08410	0.89	-0.1
1,776,086	+		DZA65_RS08410	0.89	-1.1
1,776,086	+		DZA65_RS08410	0.89	-1.4
1,776,087	-		DZA65_RS08410	0.90	+1.0
1,776,087	-		DZA65_RS08410	0.90	+2.6
1,776,087	-		DZA65_RS08410	0.90	+0.9
1,776,087	-		DZA65_RS08410	0.90	-0.9
1,776,087	-		DZA65_RS08410	0.90	+0.9
1,776,087	-		DZA65_RS08410	0.90	+0.1
1,776,087	-		DZA65_RS08410	0.90	-0.7
1,776,087	-		DZA65_RS08410	0.90	-2.1
1,776,087	-		DZA65_RS08410	0.90	-1.6
1,776,087	-		DZA65_RS08410	0.90	+0.4
1,776,105	+				+0.3
1,776,106	-				+0.1
1,776,186	+				+1.4
1,776,186	+				+0.5
1,776,187	-				+0.1
1,776,187	-				+1.3
1,776,187	-				+0.2
1,776,191	+				-2.4
1,776,191	+				+1.3
1,776,191	+				-1.0
1,776,191	+				+0.2
1,776,191	+				-2.4
1,776,191	+				-0.0
1,776,191	+				+0.4
1,776,191	+				+0.6
1,776,191	+				-1.9
1,776,191	+				-3.4
1,776,191	+				+1.1
1,776,191	+				+0.7
1,776,191	+				-0.1
1,776,191	+				+0.3
1,776,191	+				+0.1
1,776,191	+				+1.4
1,776,191	+				-0.6
1,776,192	-				-1.1
1,776,192	-				+0.7
1,776,192	-				+0.9
1,776,192	-				-1.9
1,776,192	-				+1.4
1,776,192	-				-0.8
1,776,192	-				+0.9
1,776,192	-				-0.1
1,776,192	-				-0.6
1,776,192	-				-1.9
1,776,192	-				+0.2
1,776,192	-				-1.4
1,776,192	-				-1.1
1,776,192	-				-0.6
1,776,316	+				-0.4
1,776,316	+				-0.3
1,776,316	+				-0.1
1,776,316	+				-1.0
1,776,316	+				+1.4
1,776,317	-				+0.4
1,776,317	-				+0.1
1,776,369	-				-1.4
1,776,465	+				+0.0
1,776,465	+				+0.4
1,776,478	+				-0.7
1,776,479	-				+1.1
1,776,479	-				+1.8
1,776,487	+				+0.4
1,776,488	-				-1.6
1,776,488	-				-1.0
1,776,494	-				-0.7
1,776,498	+				-0.0
1,776,499	-				-0.3
1,776,504	+				-2.1
1,776,505	-				-0.2
1,776,505	-				+0.8
1,776,505	-				-1.6
1,776,505	-				+0.4
1,776,505	-				-0.2
1,776,552	+				+0.2
1,776,553	-				-0.2
1,776,553	-				+0.4
1,776,553	-				-0.0
1,776,553	-				-0.9
1,776,602	+				+1.4
1,776,602	+				+2.0
1,776,606	+				+0.0
1,776,607	-				-0.2
1,776,607	-				+0.9
1,776,724	-				-2.7
1,776,753	+				-0.6
1,776,753	+				-0.6
1,776,753	+				-0.7
1,776,753	+				-0.4
1,776,754	-				+1.2
1,776,775	-		DZA65_RS08415	0.10	+2.6
1,776,846	+		DZA65_RS08415	0.14	-0.3
1,776,846	+		DZA65_RS08415	0.14	+1.0
1,776,847	-		DZA65_RS08415	0.14	-0.2
1,776,901	-		DZA65_RS08415	0.18	-0.9
1,776,990	+		DZA65_RS08415	0.23	-1.3
1,776,991	-		DZA65_RS08415	0.23	+0.4
1,776,996	+		DZA65_RS08415	0.23	-0.6
1,776,996	+		DZA65_RS08415	0.23	-0.6
1,776,996	+		DZA65_RS08415	0.23	-0.1
1,776,996	+		DZA65_RS08415	0.23	-0.6
1,776,996	+		DZA65_RS08415	0.23	+0.1
1,776,996	+		DZA65_RS08415	0.23	+0.7
1,776,996	+		DZA65_RS08415	0.23	-2.1
1,776,996	+		DZA65_RS08415	0.23	+0.3
1,776,997	-		DZA65_RS08415	0.24	-2.1
1,776,997	-		DZA65_RS08415	0.24	-1.6
1,776,997	-		DZA65_RS08415	0.24	-1.6
1,777,000	+		DZA65_RS08415	0.24	-0.9
1,777,000	+		DZA65_RS08415	0.24	-0.9
1,777,000	+		DZA65_RS08415	0.24	-1.4
1,777,000	+		DZA65_RS08415	0.24	+1.0
1,777,000	+		DZA65_RS08415	0.24	-1.9
1,777,000	+		DZA65_RS08415	0.24	-1.1
1,777,000	+		DZA65_RS08415	0.24	-0.5
1,777,000	+		DZA65_RS08415	0.24	-0.7
1,777,000	+		DZA65_RS08415	0.24	-1.4
1,777,001	-		DZA65_RS08415	0.24	+0.0
1,777,001	-		DZA65_RS08415	0.24	-0.7
1,777,001	-		DZA65_RS08415	0.24	-2.1
1,777,001	-		DZA65_RS08415	0.24	-1.0
1,777,001	-		DZA65_RS08415	0.24	-1.9
1,777,001	-		DZA65_RS08415	0.24	-0.7
1,777,001	-		DZA65_RS08415	0.24	-0.8
1,777,001	-		DZA65_RS08415	0.24	-0.3
1,777,001	-		DZA65_RS08415	0.24	-2.0
1,777,001	-		DZA65_RS08415	0.24	+0.8
1,777,001	-		DZA65_RS08415	0.24	+0.6
1,777,001	-		DZA65_RS08415	0.24	-0.0
1,777,001	-		DZA65_RS08415	0.24	-0.3
1,777,001	-		DZA65_RS08415	0.24	+0.4
1,777,001	-		DZA65_RS08415	0.24	+0.1
1,777,001	-		DZA65_RS08415	0.24	+0.0
1,777,012	+		DZA65_RS08415	0.24	-0.8
1,777,012	+		DZA65_RS08415	0.24	+1.6
1,777,012	+		DZA65_RS08415	0.24	-0.6
1,777,013	-		DZA65_RS08415	0.25	-0.1
1,777,024	+		DZA65_RS08415	0.25	+0.9
1,777,024	+		DZA65_RS08415	0.25	+0.4
1,777,024	+		DZA65_RS08415	0.25	+0.4
1,777,024	+		DZA65_RS08415	0.25	-0.9
1,777,024	+		DZA65_RS08415	0.25	-0.6
1,777,024	+		DZA65_RS08415	0.25	+0.1
1,777,025	-		DZA65_RS08415	0.25	-0.3
1,777,025	-		DZA65_RS08415	0.25	-0.4
1,777,025	-		DZA65_RS08415	0.25	-1.5
1,777,025	-				-0.1
1,777,025	-		DZA65_RS08415	0.25	+1.7
1,777,025	-		DZA65_RS08415	0.25	-1.6
1,777,025	-		DZA65_RS08415	0.25	-1.0
1,777,025	-		DZA65_RS08415	0.25	-2.1
1,777,065	+		DZA65_RS08415	0.28	-0.9
1,777,065	+		DZA65_RS08415	0.28	+1.2
1,777,065	+		DZA65_RS08415	0.28	+0.4
1,777,066	-		DZA65_RS08415	0.28	+0.1
1,777,066	-		DZA65_RS08415	0.28	+1.0
1,777,066	-		DZA65_RS08415	0.28	+1.4
1,777,090	+		DZA65_RS08415	0.29	+0.2
1,777,090	+		DZA65_RS08415	0.29	+0.4
1,777,090	+		DZA65_RS08415	0.29	-0.8
1,777,090	+		DZA65_RS08415	0.29	-1.6
1,777,090	+		DZA65_RS08415	0.29	+0.4
1,777,090	+		DZA65_RS08415	0.29	-0.8
1,777,113	+		DZA65_RS08415	0.31	+0.7
1,777,113	+		DZA65_RS08415	0.31	-0.7
1,777,114	-		DZA65_RS08415	0.31	-2.4
1,777,114	-		DZA65_RS08415	0.31	+0.0
1,777,234	+		DZA65_RS08415	0.38	-1.1
1,777,234	+		DZA65_RS08415	0.38	+0.8
1,777,234	+		DZA65_RS08415	0.38	-0.0
1,777,234	+		DZA65_RS08415	0.38	+0.1
1,777,234	+				+1.4
1,777,234	+		DZA65_RS08415	0.38	+0.0
1,777,235	-		DZA65_RS08415	0.38	-1.6
1,777,235	-		DZA65_RS08415	0.38	+0.1
1,777,235	-		DZA65_RS08415	0.38	-1.6
1,777,235	-		DZA65_RS08415	0.38	+0.8
1,777,235	-		DZA65_RS08415	0.38	-0.8
1,777,235	-		DZA65_RS08415	0.38	+1.7
1,777,290	+		DZA65_RS08415	0.41	-1.1
1,777,291	-		DZA65_RS08415	0.41	-1.7
1,777,291	-		DZA65_RS08415	0.41	-1.6
1,777,291	-		DZA65_RS08415	0.41	-0.6
1,777,345	+		DZA65_RS08415	0.45	-1.8
1,777,424	-		DZA65_RS08415	0.49	+0.4
1,777,424	-		DZA65_RS08415	0.49	-1.1
1,777,458	+		DZA65_RS08415	0.51	+0.4
1,777,561	+				+0.4
1,777,561	+		DZA65_RS08415	0.58	-0.5
1,777,561	+		DZA65_RS08415	0.58	+0.4
1,777,561	+		DZA65_RS08415	0.58	-2.1
1,777,561	+		DZA65_RS08415	0.58	-1.9
1,777,561	+		DZA65_RS08415	0.58	+1.3
1,777,561	+		DZA65_RS08415	0.58	-0.6
1,777,561	+		DZA65_RS08415	0.58	-1.1
1,777,561	+		DZA65_RS08415	0.58	-1.1
1,777,561	+		DZA65_RS08415	0.58	-0.7
1,777,561	+		DZA65_RS08415	0.58	+1.4
1,777,561	+		DZA65_RS08415	0.58	-0.2
1,777,561	+		DZA65_RS08415	0.58	-1.4
1,777,562	-		DZA65_RS08415	0.58	-1.6
1,777,562	-		DZA65_RS08415	0.58	-0.6
1,777,562	-		DZA65_RS08415	0.58	-0.1
1,777,562	-		DZA65_RS08415	0.58	+0.4
1,777,562	-		DZA65_RS08415	0.58	+0.0
1,777,562	-		DZA65_RS08415	0.58	-1.3
1,777,562	-		DZA65_RS08415	0.58	-1.9
1,777,562	-		DZA65_RS08415	0.58	-0.7
1,777,562	-		DZA65_RS08415	0.58	+0.2
1,777,562	-		DZA65_RS08415	0.58	+0.9
1,777,562	-		DZA65_RS08415	0.58	-1.4
1,777,562	-		DZA65_RS08415	0.58	+1.0
1,777,562	-		DZA65_RS08415	0.58	+0.6
1,777,562	-		DZA65_RS08415	0.58	+0.7
1,777,562	-		DZA65_RS08415	0.58	-1.7
1,777,960	+		DZA65_RS08415	0.82	+0.2
1,777,961	-		DZA65_RS08415	0.82	+1.3
1,778,005	+		DZA65_RS08415	0.84	-2.4
1,778,006	-		DZA65_RS08415	0.84	-2.7
1,778,006	-		DZA65_RS08415	0.84	+1.1
1,778,012	-		DZA65_RS08415	0.85	-0.2
1,778,134	+				+0.6
1,778,230	+				-0.1
1,778,231	-				-0.2
1,778,260	+				-1.4
1,778,260	+				-1.0
1,778,260	+				+2.0
1,778,261	-				-2.1
1,778,261	-				-0.6
1,778,571	+				+2.0
1,778,572	-		DZA65_RS08420	0.36	-0.8
1,779,076	-				-0.2
1,779,081	-				-1.1
1,779,110	+				+2.0
1,779,110	+				+0.8
1,779,110	+				+0.4
1,779,111	-				-2.6
1,779,111	-				+1.2
1,779,112	+				+0.2
1,779,118	+				-1.1
1,779,118	+				+1.4
1,779,118	+				-1.4
1,779,118	+				-0.7
1,779,130	-				+0.9
1,779,141	+				+1.0
1,779,141	+				+1.4
1,779,141	+				-0.9
1,779,141	+				+0.3
1,779,141	+				-1.6
1,779,141	+				-0.3
1,779,141	+				+0.5
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1,779,142	-				+1.0
1,779,142	-				-1.7
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1,779,142	-				-1.4